CB290699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METM6 (50S ribosomal protein L22P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl22p PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.089e-12 Identity = 50/150 (33.33%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 42 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 +KY E D P + +A G LR+ K+ E L + L A YL V+A + +PF + + K + GR+P K++ IL +L NA+ NAE KGL+ + L I HI N+ +R RA GR +P HI++ L Sbjct: 4 LKYKVEAD-PKNTARAMGRTLRISRKHAIELCRELSGMKLDAAVAYLNRVIALETPVPFKVHNKDL---PHRKGKIGTHSGRFPQKASLEILQVLDNAKKNAEQKGLNTEKLRIKHISSNRGFTIKRYMPRAFGRASPKNQETIHIQVIL 149
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METM5 (50S ribosomal protein L22P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl22p PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.089e-12 Identity = 50/150 (33.33%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 42 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 +KY E D P + +A G LR+ K+ E L + L A YL V+A + +PF + + K + GR+P K++ IL +L NA+ NAE KGL+ + L I HI N+ +R RA GR +P HI++ L Sbjct: 4 LKYKVEAD-PKNTARAMGRTLRISRKHAIELCRELSGMKLDAAVAYLNRVIALETPVPFKVHNKDL---PHRKGKIGTHSGRFPQKASLEILQVLDNAKKNAEQKGLNTEKLRIKHISSNRGFTIKRYMPRAFGRASPKNQETIHIQVIL 149
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_HALSA (50S ribosomal protein L22P OS=Halobacterium salinarium GN=rpl22p PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.403e-12 Identity = 41/151 (27.15%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 42 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 494 + YS + D+ S KA + + K+++ A + ++ AK YL+ V+ ++++PF + GVG + GR+P K++K L LL N +NA+ +G D D + I H+ ++ + + R RA GR + ++ C +E+ ++ Sbjct: 3 ISYSVDVDSEA-SAKAMLRERSISLKHSKAIAREISGETVADAKEYLQAVIDEERSVPFKQHNSGVGHRNDIDGWDA---GRYPEKASKDFLKLLSNVSNNADQQGFDADEMVIEHVAPHKVGESQGRKPRAMGRATTWNATLCDVEIVVT 149
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METS5 (50S ribosomal protein L22P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl22p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.217e-12 Identity = 39/126 (30.95%), Postives = 67/126 (53.17%), Query Frame = 3 Query: 108 VHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 485 V K+ A+R +++ +A+ +L+ VM K+A+P+ R+ G + + GR+P K+ K++ L+NA +NA+ KGLD D L + HI ++ +R RA GR + HIE+ Sbjct: 26 VSIKDLYNVCKAIRGMNVKEAQAFLQRVMEEKEALPYWRYDHGASHKSNISRKWKVKSGRYPKKAIKYVNKALENALANAQGKGLDEDKLKVVHIAAHKGIIIKRFMPRAFGRATKKYNRTSHIEV 151
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_PYRAE (50S ribosomal protein L22P OS=Pyrobaculum aerophilum GN=rpl22p PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11 Identity = 43/139 (30.94%), Postives = 71/139 (51.08%), Query Frame = 3 Query: 69 PTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 485 P + +A + R+ +K + E A ++ ++L +AK +LEDV+ K+ +P F + A P +WPVK A+ L +L+N E+NA +GLDVD + I H ++ K RA GR + ++EL Sbjct: 28 PEQIARAYAPEQRMSWKKSVEVARFIKGMTLKQAKTWLEDVVKLKRPVPIKTFKKKQAHHATPWEGWP--VAKWPVKVARRFLQVLENLENNARFRGLDVDRVVIVHAAAHKGFKIPNIMPRAFGRATRFDEQTVNVEL 164
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METHJ (50S ribosomal protein L22P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl22p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11 Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 3 Query: 84 KARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 + R ++ + K+ E A +R + L A YLE V+A ++ IPF RF R V K GR+P K+++ L LL N NAE GL+ D L I H+ N+ ++R RA GR P +IEL + Sbjct: 17 RGRVNEAPISPKHAIEIAGFIRGMKLDDAAAYLEGVVALQKPIPFKRFNRNV---PHRKGLVGWDAGRYPQKASRVYLRLLNNVRKNAEYNGLEGDQLRIVHVSANRGIRRRSFMPRAMGRATPKDRQTVNIELVV 149
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_THENV (50S ribosomal protein L22P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl22p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 42/134 (31.34%), Postives = 70/134 (52.24%), Query Frame = 3 Query: 84 KARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 485 KA + ++ +K + E A + ++L +AK +LEDV+ K+ IP F + A + P +WPVK A+ LDLL+N E+NA +GLDV+ + I H ++ + RA GR + ++E+ Sbjct: 33 KAYAPEQKMSWKKSVEVARFIEGMTLRQAKSWLEDVVKMKRPIPIRTFKKKQAHHATPWSGWP--VAKWPVKVARRFLDLLENLENNARFRGLDVERVVIVHAAAHKGYRIHNIMPRAFGRATRFDEQTVNVEV 164
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_PYRIL (50S ribosomal protein L22P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl22p PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 42/134 (31.34%), Postives = 72/134 (53.73%), Query Frame = 3 Query: 84 KARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 485 +A + ++ +K + E A ++ ++L +AK +LEDV+ K+ IP F + A + P +WPVK AK LDLL+N E+NA+ +GLDV+ + I H ++ + RA GR + ++E+ Sbjct: 33 RAYAPEQKMSWKKSVEVARFIKGMTLRQAKSWLEDVVKMKRPIPIKTFKKKQAHHAVPWSGWP--VAKWPVKVAKRFLDLLENLENNAKFRGLDVERVVIVHAAAHKGYRIPNIMPRAFGRATRFDEQTVNVEV 164
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METLZ (50S ribosomal protein L22P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl22p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 43/137 (31.39%), Postives = 69/137 (50.36%), Query Frame = 3 Query: 84 KARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRN-PNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 +A+ ++L K+ E AH +R + A YLE V+ K+A+PF RF R V + GR+PVK+A + L+++A+ NAE GL + + I H N+ + + RA GR P ++E+ L Sbjct: 17 RAKANELGCSPKHAVEIAHLVRNMMADDAVAYLEQVIDLKRAVPFHRFNRNVSHQKSLNGKTFGTAAGRYPVKAAAEYVRLIRSAQKNAEYAGLAPEKMVIIHAAANKGRCIKGIFPRAMGRATPKHKDSVNVEIIL 153 The following BLAST results are available for this feature:
BLAST of CB290699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290699 ID=CB290699; Name=CB290699; organism=Citrus sinensis; type=EST; length=785bpback to top |