CB290703

Overview
NameCB290703
Unique NameCB290703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB290703 vs. ExPASy Swiss-Prot
Match: CCR1_MAIZE (Probable serine/threonine-protein kinase CCRP1 OS=Zea mays GN=CCRP1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.497e-11
Identity = 70/239 (29.29%), Postives = 113/239 (47.28%), Query Frame = 1 
Query:   94 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI--ENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 789
            KY  GR +G G F + +  ++++  +++A KI  + S TK     +L+ E K++K L+  S I   +    D E+  ++L+L    SL DL +  R++ +   V     Q+I  ++Y+HSR  +HRD+K  N L+       ++ I DFGLA K       R       K + GT  Y +     G    S   D  SLG ++   L G  P++    +  KQ Y +I   + S P  V
Sbjct:   35 KYSKGRMLGKGGFAKCYEVTNLENKKVLAGKIICKASLTKSRAKQKLISEIKIHKSLRH-SNIVEFEHVFEDQENVYILLELCPNQSLHDL-IKRRKRLTEIEVQCYTLQLICGLKYLHSRRVIHRDLKLGNLLL---NDKMELKICDFGLAAKLEFDGEKR-------KTVCGTPNYIAPEVIEGKGGHSYEVDTWSLGVIIYTLLVGRPPFE---TSDVKQTYKRIKACEYSFPDHV 258
The following BLAST results are available for this feature:
BLAST of CB290703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 161
Match NameE-valueIdentityDescription
CCR1_MAIZE8.497e-1129.29Probable serine/threonine-protein kinase CCRP1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01da10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01da10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290703 ID=CB290703; Name=CB290703; organism=Citrus sinensis; type=EST; length=824bp
GCAGACAGAAACCCTAATTCCTCTCTCAAAATTTCCAGCCAATTTAGATT
TTCAGATCAAAGAGAGAAAGAGATGGAGAGAATTATTGGAGTGAAGTATA
AGTTAGGTCGCAAAATTGGGAGCGGATCATTTGGTGAAATATTTCTTGCG
AGCCACGTCGACACCAATGAAATTGTGGCGGTCAAGATTGAAAACAGCGG
GACAAAACATCCGCAACTGCTTTATGAAGCCAAGGTTTATAAGATTCTTC
AAGGAGGAAGTGGTATTCCGAATATTAAGTGGTATGGTGTAGACGGGGAG
GACAATGTTCTCGTACTTGACCTGCTGGGTCCAAGTCTTGAAGATTTATT
TGTCTACTGCAGGAGGAAGTTTTCCTTGAAAACTGTCCTGATGTTGGCTG
ATCAAATGATTGCAAGAATAGAATACGTACATTCTAGAGGGTTTCTGCAT
AGAGACATCAAACCTGATAACTTTCTCATGGGTCTTGGTAGGAAAGCAAA
TCAGGTCTACATTATTGATTTTGGACTTGCAAAAAAGTATCGGGACCCCA
CAACAAACCGGCATATTCCTTACAGGGAGAACAAAAACTTAACAGGGACT
GCTCGTTACGCAAGTTGTAATACGCATCTAGGAATTGAGCAAAGCCGTCG
GGATGATTTAGAGTCTCTTGGCTATGTTCTGTTGTATTTTTTACGAGGAA
GCCTCCCTTGGCAGGGTCTAAAAGCTGCCACAAAAAAGCAAAAGTATGAC
AAAATATGTGAGAAGAAGGTATCAACACCTATTGAGGTCCTTTGCCAGTC
TCATCCTGCGGAATTTGCATCTTA
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