CB290703

Overview
NameCB290703
Unique NameCB290703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290703 vs. ExPASy Swiss-Prot
Match: VRK1_MOUSE (Serine/threonine-protein kinase VRK1 OS=Mus musculus GN=Vrk1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.651e-22
Identity = 71/231 (30.74%), Postives = 118/231 (51.08%), Query Frame = 1
Query:   94 KYKLGRKIGSGSFGEIFLASHVDTNE----------IVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPN--IKWYGV-----------DGED-NVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 714
            ++KLG  IG G FG I+LA   DTN           +V V+  ++G    +L +  +  K  Q    I    +K+ GV           +G+    +++D  G  L+ ++    ++FS KTVL L+ +++  +EY+H   ++H DIK  N L+   +  +QVY++D+GLA +Y     ++       +   GT  + S + H G+  SRR DLE LGY ++ +L G LPW+
Sbjct:   36 EWKLGLPIGQGGFGCIYLA---DTNSSKPVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTHKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLS-HKNPDQVYLVDYGLAYRYCPDGVHKEYKEDPKRCHDGTLEFTSIDAHKGVAPSRRGDLEILGYCMIQWLSGCLPWE 262          
BLAST of CB290703 vs. ExPASy Swiss-Prot
Match: VRK1_HUMAN (Serine/threonine-protein kinase VRK1 OS=Homo sapiens GN=VRK1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.803e-22
Identity = 77/265 (29.06%), Postives = 129/265 (48.68%), Query Frame = 1
Query:    1 ADRNPNSSLKISSQFR----FSDQREKEMERIIGVKYKLGRKIGSGSFGEIFLAS-----HVDTNEIVAVKIENSGTKHPQLLYEAKVYKI------LQGGSGIPNIKWYGV-----------DGED-NVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 714
            A R  ++   ++ QF      +D  +KE        +K+G  IG G FG I+LA       V ++    VK+E S   +  L  E K Y+       +Q       +K+ GV           +G+    +++D  G  L+ ++    ++FS KTVL L+ +++  +EY+H   ++H DIK  N L+   +  +QVY++D+GLA +Y     ++       +   GT  + S + H G+  SRR DLE LGY ++ +L G LPW+
Sbjct:    9 AGRQSSAKRHLAEQFAVGEIITDMAKKE--------WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSD--NGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWE 262          
BLAST of CB290703 vs. ExPASy Swiss-Prot
Match: VRK1_DANRE (Serine/threonine-protein kinase VRK1 OS=Danio rerio GN=vrk1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.070e-21
Identity = 68/228 (29.82%), Postives = 111/228 (48.68%), Query Frame = 1
Query:   94 KYKLGRKIGSGSFGEIFLASHVDTNEIVA-----VKIENS--GTKHPQLLYEAKVYKILQGGS----------GIPNIKWYGVDGEDN----VLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 714
            K+KLG  +G G FG ++LA+   +  + A     +K+E S  G    +L +  +  K    G+          G+P     G   ++      +V+D  G  L+ LF    +KFS K VL L  +++  +EY+H   ++H DIK  N L+      NQV+++D+GLA +Y      +       +   GT  + S + H G+  SRR DLE +GY ++ +L   LPW+
Sbjct:   37 KWKLGSAVGQGGFGLLYLANEDSSGPVTADAPYVIKVEPSDNGPLFSELKFYMRAAKPDLIGAWMKSKKMEYLGVPKYWGSGFHEKNGKRYRFMVMDRFGTDLQKLFEGNGKKFSRKLVLQLGLRLLDILEYIHDHEYVHADIKASNLLLSY-TNPNQVFLVDYGLAYRYAPEGVPKEYKEDPKRCHDGTIEFTSIDAHKGVSPSRRADLEIMGYCMIQWLCSRLPWE 263          
BLAST of CB290703 vs. ExPASy Swiss-Prot
Match: V212_FOWPV (Probable serine/threonine-protein kinase FPV212 OS=Fowlpox virus GN=FPV212 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.070e-21
Identity = 66/231 (28.57%), Postives = 118/231 (51.08%), Query Frame = 1
Query:   73 MERIIGVKYKLGRKIGSGSFGEIFLAS--HVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS-----------GIPNIKWYGVDGEDNV----LVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 714
            +E I   K+ LG+++GSG FG ++  S    + + +  ++++ SG    ++ +  +V K                 GIP+   +G+    NV     ++  LG  LE++    + KF++  +  LA +++  ++++HS+ F H DIK  N L G  +  ++VY++D+GLA KY     ++           GT  + S + H G+  SRR DLESLG+ +L +  G LPW+
Sbjct:   17 LEDITKNKWILGKQLGSGGFGLVYQVSCKSKEIDCVAKIELKESGGLFCEINFYNRVMKNKTSLDTWMKEQKIDYIGIPSFHGFGITIYKNVEYRFAIIQRLGRDLENILSE-KEKFNITVIKKLAIKILDILKFIHSKEFSHGDIKAGNILFG--KDDDKVYLVDYGLATKYSSNGKHKEYTINPKNRHNGTMAFTSIDAHKGVTVSRRGDLESLGFCMLKWYSGKLPWE 244          
BLAST of CB290703 vs. ExPASy Swiss-Prot
Match: YKL2_CAEEL (Putative casein kinase I C03C10.2 OS=Caenorhabditis elegans GN=C03C10.2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.113e-21
Identity = 64/211 (30.33%), Postives = 114/211 (54.03%), Query Frame = 1
Query:  115 IGSGSFGEIFLASHVDTNEIVAVKIE---NSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR----KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV-YIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 723
            IG+G +G+IF+   V  N+  A+KIE    +     +++ E +V   +QG + IP +   G + + N +++ LL  ++ D   + +R    + S +TV  +A Q +  ++ +H  G++HRD+KP N   G+  +   + Y++DFGL ++++  +    IP+R N    GT RY S   H  +EQ+  DD  S+ Y     + G LPW+ L+
Sbjct:   78 IGNGGYGQIFMVMDVKKNDERAMKIEPKLRAEVITKRMIMEQQVLMKMQGKTHIPTMYASGFNDQFNFIIMQLLSMNVGD---FRKRSPLGRLSKETVGRIAYQTLNALKDIHDMGYVHRDVKPANICFGVHAQNRHILYLLDFGLVRRFKTES-GVCIPWRINAGFKGTERYVSVRVHEKLEQTPWDDAFSVLYTAYELVVGELPWRYLE 284          
BLAST of CB290703 vs. ExPASy Swiss-Prot
Match: 389L_IIV6 (Probable serine/threonine-protein kinase 389L OS=Invertebrate iridescent virus 6 GN=IIV6-389L PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.935e-21
Identity = 75/254 (29.53%), Postives = 130/254 (51.18%), Query Frame = 1
Query:   70 EMERIIGVKYKLGRKIGSGSFGEIFLAS-------HVDTNEIVAVKIENSGTK--------HPQLLYEAKVYKI-LQGGS---GIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL-KAATKKQKYDKICEKKV 771
            E   +I   + +G  IG G FGEI+ A+       + D +   A+KIE             + +++ E ++ K  LQ      G+P     G+  +   +V++    +++ LF       +  T+L +  Q++  +EY+HS+G++H DIK +N L+      + +Y++DFGL  +Y    +N + P    K   GT +Y S ++H G+E SRR DLE LGY ++ +  G LPWQ L K +  K+  +++ E K+
Sbjct:  117 ETGSVINQNWFIGTSIGKGGFGEIYSAAKFNDHGNYKDDDFSFAIKIEPKSNGPLFVEMHFYKRVIVEKEIEKFKLQKNIQYLGLPKYYGSGLYNDYRYIVMEKYDSNIDKLFR--NGDLNSSTILQIGIQILNIVEYIHSKGYIHADIKGENILL-KENDTSHIYLVDFGLCSRY----SNIYQP-DPKKAHNGTLKYTSRDSHQGVE-SRRGDLEILGYNMIEWSGGILPWQHLCKKSAGKKILNEVSESKI 361          
BLAST of CB290703 vs. ExPASy Swiss-Prot
Match: VRK2_MOUSE (Serine/threonine-protein kinase VRK2 OS=Mus musculus GN=Vrk2 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.183e-20
Identity = 72/237 (30.38%), Postives = 119/237 (50.21%), Query Frame = 1
Query:   67 KEMERIIGVKYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAK------VYKILQGGS----GIPNIKWYGVDG----EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN--KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 714
            K ++ + G ++ LG+ IGSG FG I+LA      + D   ++ ++ + +G    +L +  +      + K +Q       GIP    +G+          +V++ LG  L+ L       F   TVL L  +M+  +EY+H   ++H DIK  N L+      ++VY+ D+GL+  YR      H  Y+E+  K   GT  + S + H G+  SRR D+E LGY +L++L G LPW+
Sbjct:   19 KILDDMEGNRWALGKMIGSGGFGLIYLAFPTNKPNKDARHVIKLEYQENGPLFSELKFYQRAAKRECIQKWIQQRKLDYLGIPVFYGFGLTDFKGRSYRFMVMERLGIDLQKLLDQ-NGGFKKLTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLDF-TNPDRVYLADYGLS--YRYCPNGNHKQYQEDPRKGHNGTIEFTSLDAHKGVAPSRRSDVEILGYCMLHWLFGKLPWE 251          
BLAST of CB290703 vs. ExPASy Swiss-Prot
Match: VPK1_VACCW (Serine/threonine-protein kinase 1 OS=Vaccinia virus (strain Western Reserve) GN=VPK1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.183e-20
Identity = 65/241 (26.97%), Postives = 122/241 (50.62%), Query Frame = 1
Query:   94 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYK--ILQGGSGIPNIKWYG------------VDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNL--TGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK-------AATKKQKY 747
            ++ +G  IG G FG I+  +  D N +V ++ + +G+   +  +  +V K  +++      NIK  G            ++ E   LV++ LG  L+ +      +   ++V+++  +++  I+++H +G+ H DIK  N ++    K N++Y++D+GL  K+   +   H+P+  N N    GT  +   ++H G   SRR DLE+LGY ++ +L G LPW  +         +  KQKY
Sbjct:   15 QWVVGPLIGKGGFGSIYTTN--DNNYVVKIEPKANGSLFTEQAFYTRVLKPSVIEEWKKSHNIKHVGLITCKAFGLYKSINVEYRFLVINRLGADLDAVIRANNNRLPKRSVMLIGIEILNTIQFMHEQGYSHGDIKASNIVLDQIDK-NKLYLVDYGLVSKFM--SNGEHVPFIRNPNKMDNGTLEFTPIDSHKGYVVSRRGDLETLGYCMIRWLGGILPWTKISETKNCALVSATKQKY 250          
BLAST of CB290703 vs. ExPASy Swiss-Prot
Match: VPK1_VACCA (Serine/threonine-protein kinase 1 OS=Vaccinia virus (strain Ankara) GN=VPK1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.183e-20
Identity = 65/241 (26.97%), Postives = 122/241 (50.62%), Query Frame = 1
Query:   94 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYK--ILQGGSGIPNIKWYG------------VDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNL--TGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK-------AATKKQKY 747
            ++ +G  IG G FG I+  +  D N +V ++ + +G+   +  +  +V K  +++      NIK  G            ++ E   LV++ LG  L+ +      +   ++V+++  +++  I+++H +G+ H DIK  N ++    K N++Y++D+GL  K+   +   H+P+  N N    GT  +   ++H G   SRR DLE+LGY ++ +L G LPW  +         +  KQKY
Sbjct:   15 QWVVGPLIGKGGFGSIYTTN--DNNYVVKIEPKANGSLFTEQAFYTRVLKPSVIEEWKKSHNIKHVGLITCKAFGLYKSINVEYRFLVINRLGADLDAVIRANNNRLPKRSVMLIGIEILNTIQFMHEQGYSHGDIKASNIVLDQIDK-NKLYLVDYGLVSKFM--SNGEHVPFIRNPNKMDNGTLEFTPIDSHKGYVVSRRGDLETLGYCMIRWLGGILPWTKISETKNCALVSATKQKY 250          
BLAST of CB290703 vs. ExPASy Swiss-Prot
Match: VPK1_VACCC (Serine/threonine-protein kinase 1 OS=Vaccinia virus (strain Copenhagen) GN=VPK1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.545e-20
Identity = 65/241 (26.97%), Postives = 122/241 (50.62%), Query Frame = 1
Query:   94 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYK--ILQGGSGIPNIKWYG------------VDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNL--TGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK-------AATKKQKY 747
            ++ +G  IG G FG I+  +  D N +V ++ + +G+   +  +  +V K  +++      NIK  G            ++ E   LV++ LG  L+ +      +   ++V+++  +++  I+++H +G+ H DIK  N ++    K N++Y++D+GL  K+   +   H+P+  N N    GT  +   ++H G   SRR DLE+LGY ++ +L G LPW  +         +  KQKY
Sbjct:   15 QWVVGPLIGKGGFGSIYTTN--DNNYVVKIEPKANGSLFTEQAFYTRVLKPSVIEEWKKSHNIKHVGLITCKAFGLYKSINVEYRFLVINRLGVDLDAVIRANNNRLPKRSVMLIGIEILNTIQFMHEQGYSHGDIKASNIVLDQIDK-NKLYLVDYGLVSKFM--SNGEHVPFIRNPNKMDNGTLEFTPIDSHKGYVVSRRGDLETLGYCMIRWLGGILPWTKISETKNCALVSATKQKY 250          
The following BLAST results are available for this feature:
BLAST of CB290703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 161
Match NameE-valueIdentityDescription
VRK1_MOUSE1.651e-2230.74Serine/threonine-protein kinase VRK1 OS=Mus muscul... [more]
VRK1_HUMAN4.803e-2229.06Serine/threonine-protein kinase VRK1 OS=Homo sapie... [more]
VRK1_DANRE1.070e-2129.82Serine/threonine-protein kinase VRK1 OS=Danio reri... [more]
V212_FOWPV1.070e-2128.57Probable serine/threonine-protein kinase FPV212 OS... [more]
YKL2_CAEEL3.113e-2130.33Putative casein kinase I C03C10.2 OS=Caenorhabditi... [more]
389L_IIV66.935e-2129.53Probable serine/threonine-protein kinase 389L OS=I... [more]
VRK2_MOUSE1.183e-2030.38Serine/threonine-protein kinase VRK2 OS=Mus muscul... [more]
VPK1_VACCW1.183e-2026.97Serine/threonine-protein kinase 1 OS=Vaccinia viru... [more]
VPK1_VACCA1.183e-2026.97Serine/threonine-protein kinase 1 OS=Vaccinia viru... [more]
VPK1_VACCC1.545e-2026.97Serine/threonine-protein kinase 1 OS=Vaccinia viru... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01da10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01da10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290703 ID=CB290703; Name=CB290703; organism=Citrus sinensis; type=EST; length=824bp
GCAGACAGAAACCCTAATTCCTCTCTCAAAATTTCCAGCCAATTTAGATT
TTCAGATCAAAGAGAGAAAGAGATGGAGAGAATTATTGGAGTGAAGTATA
AGTTAGGTCGCAAAATTGGGAGCGGATCATTTGGTGAAATATTTCTTGCG
AGCCACGTCGACACCAATGAAATTGTGGCGGTCAAGATTGAAAACAGCGG
GACAAAACATCCGCAACTGCTTTATGAAGCCAAGGTTTATAAGATTCTTC
AAGGAGGAAGTGGTATTCCGAATATTAAGTGGTATGGTGTAGACGGGGAG
GACAATGTTCTCGTACTTGACCTGCTGGGTCCAAGTCTTGAAGATTTATT
TGTCTACTGCAGGAGGAAGTTTTCCTTGAAAACTGTCCTGATGTTGGCTG
ATCAAATGATTGCAAGAATAGAATACGTACATTCTAGAGGGTTTCTGCAT
AGAGACATCAAACCTGATAACTTTCTCATGGGTCTTGGTAGGAAAGCAAA
TCAGGTCTACATTATTGATTTTGGACTTGCAAAAAAGTATCGGGACCCCA
CAACAAACCGGCATATTCCTTACAGGGAGAACAAAAACTTAACAGGGACT
GCTCGTTACGCAAGTTGTAATACGCATCTAGGAATTGAGCAAAGCCGTCG
GGATGATTTAGAGTCTCTTGGCTATGTTCTGTTGTATTTTTTACGAGGAA
GCCTCCCTTGGCAGGGTCTAAAAGCTGCCACAAAAAAGCAAAAGTATGAC
AAAATATGTGAGAAGAAGGTATCAACACCTATTGAGGTCCTTTGCCAGTC
TCATCCTGCGGAATTTGCATCTTA
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