CB290721

Overview
NameCB290721
Unique NameCB290721
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.853e-61
Identity = 113/120 (94.17%), Postives = 118/120 (98.33%), Query Frame = -3 
Query:  428 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 787
            KDPTKVDRSGA IVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EILKIVKE+FDFRPGMM+INLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMMSINLDLKRGGNRRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 392
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.277e-61
Identity = 112/121 (92.56%), Postives = 118/121 (97.52%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL IVKE+FDFRPGM++INLDL RGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KP+A
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKENFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPEA 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.412e-60
Identity = 113/120 (94.17%), Postives = 117/120 (97.50%), Query Frame = -3 
Query:  428 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 787
            KDPTKVDRSGA IVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKESFDFRPGM+ I+LDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLKWEKPQ
Sbjct:  240 KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAIHLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKWEKPQ 359
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.412e-60
Identity = 113/121 (93.39%), Postives = 116/121 (95.87%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKSIVANGLARRCIVQVSYAIGVP+PLSVFVDSYGTG IPDKEILKIVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGRDD DFTWEVVKPLKWEKPQA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGNIPDKEILKIVKETFDFRPGMIAINLDLKRGGNNRFLKTAAYGHFGRDDADFTWEVVKPLKWEKPQA 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.412e-60
Identity = 111/121 (91.74%), Postives = 117/121 (96.69%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQ+AKS+VANG+ARR +VQVSYAIGVPEP SVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  273 KDPTKVDRSGAYIVRQSAKSVVANGMARRALVQVSYAIGVPEPFSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.844e-60
Identity = 112/120 (93.33%), Postives = 117/120 (97.50%), Query Frame = -3 
Query:  428 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 787
            KDPTKVDRSGA IVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EILKIVKE+FDFRPGMM+INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLKWE PQ
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKWENPQ 392
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.844e-60
Identity = 112/121 (92.56%), Postives = 117/121 (96.69%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+Y TG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYETGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.408e-60
Identity = 111/121 (91.74%), Postives = 119/121 (98.35%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EILKIVKE+FDFRPGM+++NLDLKRGGNGRFLKTAAYGHFGR+DPDFTWEVVKPLKW+K QA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILKIVKENFDFRPGMISVNLDLKRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWDKVQA 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.408e-60
Identity = 111/121 (91.74%), Postives = 117/121 (96.69%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKE+FDFRPGMMTINLDLKRGGNGRF KTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKETFDFRPGMMTINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.408e-60
Identity = 112/118 (94.92%), Postives = 116/118 (98.31%), Query Frame = -3 
Query:  434 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 787
            KDPTKVDRSGA IVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGG+GRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGSGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390
The following BLAST results are available for this feature:
BLAST of CB290721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_SOLLC4.853e-6194.17S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK2_SOLLC8.277e-6192.56S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]
METK3_ACTCH1.412e-6094.17S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]
METK2_DAUCA1.412e-6093.39S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK1_BRAJU1.412e-6091.74S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK_SOLBR1.844e-6093.33S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK1_ARATH1.844e-6092.56S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK_LITCN2.408e-6091.74S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK2_ARATH2.408e-6091.74S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK1_CATRO2.408e-6094.92S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290721 ID=CB290721; Name=CB290721; organism=Citrus sinensis; type=EST; length=789bp
TTTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGACGTTATATTAA
TAAGCAAAACAACTATTGGGCTTTAGCCAAAGCTACAAATTAATACAACT
CGCGTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAA
GAATTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATC
ACTACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAG
TGGGGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTC
TGAACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATT
CAAATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAG
TTTTCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGG
GCTTCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCA
TAGGCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAA
ATTGATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTT
TGAGGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGAGTCCACAAAA
ACAGACAATGGCTCAGGCACACCAATGGCATAGGAGACTTGGACAATGCA
CCTGCGAGCAAGCCCGTTTGCAACAATGCTCTTAGCAGCCTGCCTAACAA
TGGATGCACCACTCCTATCCACCTTAGTAGGGTCTTTTC
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