CB290721

Overview
NameCB290721
Unique NameCB290721
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:1062..1847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.047e-55
Identity = 106/121 (87.60%), Postives = 113/121 (93.39%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA I RQAAKSIVA GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  277 KDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.047e-55
Identity = 106/121 (87.60%), Postives = 113/121 (93.39%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA I RQAAKSIVA GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  277 KDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.368e-55
Identity = 104/118 (88.14%), Postives = 112/118 (94.92%), Query Frame = -3 
Query:  434 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 787
            KDPTKVDRSGA IVRQAAKSIVA GLARRC+VQVSYAIGVPEPLSVFVDSYGTG IPDK IL+++K++FDFRPGM+TINLDLKRGGNGRF KTAAYGHFGRDDPDFTWE+VKPLK EK
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGTIPDKVILELIKKNFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEIVKPLKQEK 390
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.047e-55
Identity = 104/121 (85.95%), Postives = 115/121 (95.04%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA I RQAAKSI+A+GLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKE+FDFRPGM+TINLDLK+GGN RF+KTAAYGHFGRDD DFTWEVVKPLK++K  A
Sbjct:  275 KDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMITINLDLKKGGN-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.979e-55
Identity = 104/118 (88.14%), Postives = 112/118 (94.92%), Query Frame = -3 
Query:  434 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 787
            KDPTKVDR GA IVRQAAKSIVA+GLARR IVQ+  AIGVPEPLSVFVD+YGTGKIPD+EILKIVKE+FDFRPGM++INLDL RGGNGRFLKTAAYGHFGR+DPDFTWEVVKPLKWEK
Sbjct:  248 KDPTKVDRRGAYIVRQAAKSIVASGLARRAIVQLLRAIGVPEPLSVFVDTYGTGKIPDREILKIVKETFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 365
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.197e-55
Identity = 114/169 (67.46%), Postives = 120/169 (71.01%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAA------------------------------------------------YGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKE+FDFRPGM++INLDLKRGGNGRFLKTAA                                                YGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGTGKIPDREILKIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 441
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.787e-55
Identity = 104/121 (85.95%), Postives = 115/121 (95.04%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA I RQAAKSI+A+GLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGM++INLDLK+GGN RF+KTAAYGHFGR+D DFTWEVVKPLK++K  A
Sbjct:  275 KDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGREDADFTWEVVKPLKFDKASA 394
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.864e-55
Identity = 104/109 (95.41%), Postives = 106/109 (97.25%), Query Frame = -3 
Query:  461 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 787
            KDPTKVDRSGA IVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKESFDFRPGM+ INLDLKRGGN RFLKTAAYGHFGRDDPDFTWE
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWE 381
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.864e-55
Identity = 103/121 (85.12%), Postives = 115/121 (95.04%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA I RQAAKSI+A+GLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKE+FDFRPGM++INLDLK+GGN RF+KTAAYGHFGRDD DFTWEVVKPLK++K  A
Sbjct:  275 KDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.368e-54
Identity = 103/121 (85.12%), Postives = 112/121 (92.56%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA I RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKI D+EILKIVKE+FDFRPGM+ I LDLK+GGN R+LKTAAYGHFGR+DPDFTWE  K LKWEKPQA
Sbjct:  277 KDPTKVDRSGAYIARQAAKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIHDREILKIVKENFDFRPGMIAIALDLKKGGN-RYLKTAAYGHFGREDPDFTWEAAKTLKWEKPQA 396
The following BLAST results are available for this feature:
BLAST of CB290721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_ATRNU1.047e-5587.60S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_ATRNU1.047e-5587.60S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK3_PICSI1.368e-5588.14S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK1_HORVU3.047e-5585.95S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK1_PEA3.979e-5588.14S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK1_DAUCA5.197e-5567.46S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK1_TRIMO6.787e-5585.95S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK_CAMSI8.864e-5595.41S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK3_HORVU8.864e-5585.12S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK2_DIACA3.368e-5485.12S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290721 ID=CB290721; Name=CB290721; organism=Citrus sinensis; type=EST; length=789bp
TTTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGACGTTATATTAA
TAAGCAAAACAACTATTGGGCTTTAGCCAAAGCTACAAATTAATACAACT
CGCGTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAA
GAATTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATC
ACTACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAG
TGGGGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTC
TGAACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATT
CAAATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAG
TTTTCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGG
GCTTCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCA
TAGGCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAA
ATTGATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTT
TGAGGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGAGTCCACAAAA
ACAGACAATGGCTCAGGCACACCAATGGCATAGGAGACTTGGACAATGCA
CCTGCGAGCAAGCCCGTTTGCAACAATGCTCTTAGCAGCCTGCCTAACAA
TGGATGCACCACTCCTATCCACCTTAGTAGGGTCTTTTC
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