CB290721

Overview
NameCB290721
Unique NameCB290721
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:1062..1847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.574e-50
Identity = 96/115 (83.48%), Postives = 105/115 (91.30%), Query Frame = -3 
Query:  443 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 787
            KDPTKVDRSGA IVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNYRYQKTAAYGHFGRDDPDFTWETVKVLK 387
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.574e-50
Identity = 96/115 (83.48%), Postives = 105/115 (91.30%), Query Frame = -3 
Query:  443 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 787
            KDPTKVDRSGA IVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVLK 387
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.121e-49
Identity = 98/121 (80.99%), Postives = 107/121 (88.43%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK L    PQA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL---NPQA 390
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.464e-49
Identity = 95/115 (82.61%), Postives = 105/115 (91.30%), Query Frame = -3 
Query:  443 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 787
            KDPTKVDRSGA IVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDF+WE VK LK
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFSWETVKVLK 387
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.464e-49
Identity = 95/115 (82.61%), Postives = 105/115 (91.30%), Query Frame = -3 
Query:  443 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 787
            KDPTKVDRSGA IVRQAAKS+VA+GLARRC+VQVSYAIGV EPLSVFVD+Y TGKI DK+IL ++KE+FDFRPGM+ INLDLKRGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTYKTGKIADKDILALIKENFDFRPGMIAINLDLKRGGNLRYQKTAAYGHFGRDDPDFTWETVKILK 387
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.493e-49
Identity = 96/121 (79.34%), Postives = 106/121 (87.60%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IP K++L ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK L    PQA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPGKDVLTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL---NPQA 390
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.619e-48
Identity = 93/115 (80.87%), Postives = 104/115 (90.43%), Query Frame = -3 
Query:  443 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 787
            KDPTKVDRSGA IVRQAAKS+VA+GLARRC+VQVSYAIGV EPLSVFVD++ TGKIPDK+IL ++KE+FDFRPGM+ INLDLKRGGN R+ KTAA GH GRDDPDFTWE VK LK
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTFKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAALGHLGRDDPDFTWETVKILK 387
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.036e-48
Identity = 93/115 (80.87%), Postives = 102/115 (88.70%), Query Frame = -3 
Query:  443 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 787
            KDPTKVDRSGA IVRQAAKS+VA GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGM+ INLDL RGGN R+ KTAAYGHFGRD+ DFTWE VK LK
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILALIKENFDFRPGMIAINLDLLRGGNFRYQKTAAYGHFGRDEADFTWETVKALK 387
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.979e-46
Identity = 87/115 (75.65%), Postives = 102/115 (88.70%), Query Frame = -3 
Query:  443 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 787
            KDPTKVDRSGA I RQAAKS+VA+GLA+RC+VQVSY+I V EPLSVFVD+YGTG +PD EILK++++ FDFRPG++  NLDLKRGGN R+ KTAAYGHFGRDDPDFTWE VK L+
Sbjct:  276 KDPTKVDRSGAYIARQAAKSVVASGLAKRCLVQVSYSIAVAEPLSVFVDTYGTGTMPDAEILKLIRKHFDFRPGLIGKNLDLKRGGNKRYQKTAAYGHFGRDDPDFTWETVKKLE 390
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.271e-41
Identity = 87/116 (75.00%), Postives = 94/116 (81.03%), Query Frame = -3 
Query:  446 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD--PDFTWEVVKPL 787
            KDPTKVDRSGA I RQAAKS+VA GLARRC+ Q+SYAIGV EPLSV VD+YGTGKIPD EIL  VK +FDFRPGMM   LDLKRGGN R+  TAAYGHFGRD+    FTWE V PL
Sbjct:  272 KDPTKVDRSGAYISRQAAKSVVAAGLARRCLFQISYAIGVAEPLSVHVDTYGTGKIPDSEILAKVKAAFDFRPGMMGKALDLKRGGNKRYQTTAAYGHFGRDEDLDIFTWEKVVPL 387
The following BLAST results are available for this feature:
BLAST of CB290721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_SOLLC6.574e-5083.48S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]
METK2_SOLTU6.574e-5083.48S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK1_PETHY1.121e-4980.99S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK1_TOBAC1.464e-4982.61S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_ACTCH1.464e-4982.61S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK2_PETHY9.493e-4979.34S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK3_CATRO1.619e-4880.87S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_TOBAC8.036e-4880.87S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK_CHLRE1.979e-4675.65S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTLU4.271e-4175.00S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290721 ID=CB290721; Name=CB290721; organism=Citrus sinensis; type=EST; length=789bp
TTTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGACGTTATATTAA
TAAGCAAAACAACTATTGGGCTTTAGCCAAAGCTACAAATTAATACAACT
CGCGTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAA
GAATTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATC
ACTACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAG
TGGGGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTC
TGAACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATT
CAAATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAG
TTTTCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGG
GCTTCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCA
TAGGCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAA
ATTGATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTT
TGAGGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGAGTCCACAAAA
ACAGACAATGGCTCAGGCACACCAATGGCATAGGAGACTTGGACAATGCA
CCTGCGAGCAAGCCCGTTTGCAACAATGCTCTTAGCAGCCTGCCTAACAA
TGGATGCACCACTCCTATCCACCTTAGTAGGGTCTTTTC
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