CB290722

Overview
NameCB290722
Unique NameCB290722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.317e-69
Identity = 139/242 (57.44%), Postives = 166/242 (68.60%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFT-KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV EGHPDK+CDQISDAVLDA LE+DP ++VACE    T +V+V GEITTK  VD  KI RDT R IG+     G DAD C V+ +I++QSPDIA GV        G  T    E IGAGDQG MFG+A DETP  MP+   LA KL  RL  VRK     +LRPDGKTQVTVEY +D     P+RV T+++STQH   VT+ +I AD+ EHVIKP+IPE  LD+ T  ++NP+GRF
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILEKDPYARVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTDDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKGGILPYLRPDGKTQVTVEYEDDR----PIRVDTIVVSTQHSPEVTHAQIEADVIEHVIKPIIPEGMLDKNTKIYINPTGRF 241          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_BACP2 (S-adenosylmethionine synthetase OS=Bacillus pumilus (strain SAFR-032) GN=metK PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.247e-69
Identity = 138/242 (57.02%), Postives = 172/242 (71.07%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFTKRPED-IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV EGHPDK+CDQISD++LD  L++DP ++VACET   T +V+V GEITT   VD  K VRDT + IG+     G DA+ C VL +I++QS DIAQGV        G  T+   D IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK+ T ++LRPDGKTQVTVEY + N    PVR+ TV+ISTQH   VT ++I +DLKEHVI PV+P + +DE+T + +NP+GRF
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRDTIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGTMTEEELDAIGAGDQGLMFGFANNETEELMPLPISLAHKLSLRLTEVRKDQTLAYLRPDGKTQVTVEYDDQN---KPVRIDTVVISTQHAPEVTLEQIQSDLKEHVISPVVPSELIDEQTKYFINPTGRF 245          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_CLOTE (S-adenosylmethionine synthetase OS=Clostridium tetani GN=metK PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.833e-69
Identity = 137/240 (57.08%), Postives = 170/240 (70.83%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR-----PED-IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV EGHPDK+CDQISDAVLDA LE+DP  +VACET   T MV+V GEITT   VD  KIVR+T  +IG+     G D+D C VL +I +QSPDIA GV      +      ED IGAGDQG MFGYA +ET E+MP++  +A KL  RL+EVRKN T  +LRPDGKTQVTVE Y DN A   +R+ T+++STQH   VT ++I  D+ EHVI  V+P ++LDE T +++NP+GRF
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILERDPNGRVACETSVTTGMVLVTGEITTNCYVDIPKIVRNTIEAIGYTRAKYGFDSDTCAVLTSISEQSPDIAMGVDESLESKQGGMDKEDVIGAGDQGMMFGYANNETSEYMPMAISIAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVE-YEDNKA---IRIDTIVVSTQHGPEVTREQIEKDIFEHVISKVVPVEFLDENTNYYINPTGRF 239          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.006e-69
Identity = 134/240 (55.83%), Postives = 165/240 (68.75%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV EGHPDK+CDQISDAVLDA   +DP ++VACET   T +VMV GEITT   VD  KI R+T ++IG+     G D + C V+  I++QS DIA GV      R       + +GAGDQG MFG+AT+ET EFMP    +A +L  RLTEVRKN T  +LRPDGKTQVTVEY ND     PVR+  ++ISTQH   V+ ++I ADL EHVIK VIP + LDE T +++NP+GRF
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLVMVMGEITTNCYVDIPKIARETIKNIGYDRAKYGFDCETCSVMTTIDEQSSDIAMGVDEALESRAGEKIDIDAVGAGDQGMMFGFATNETEEFMPAPIAMAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVEYENDK----PVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRF 239          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_CLOP1 (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.006e-69
Identity = 134/240 (55.83%), Postives = 165/240 (68.75%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV EGHPDK+CDQISDAVLDA   +DP ++VACET   T +VMV GEITT   VD  KI R+T ++IG+     G D + C V+  I++QS DIA GV      R       + +GAGDQG MFG+AT+ET EFMP    +A +L  RLTEVRKN T  +LRPDGKTQVTVEY ND     PVR+  ++ISTQH   V+ ++I ADL EHVIK VIP + LDE T +++NP+GRF
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLVMVMGEITTNCYVDIPKIARETIKNIGYDRAKYGFDCETCSVMTTIDEQSSDIAMGVDEALESRAGEKIDIDAVGAGDQGMMFGFATNETEEFMPAPIAMAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVEYENDK----PVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRF 239          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_CLONN (S-adenosylmethionine synthetase OS=Clostridium novyi (strain NT) GN=metK PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.006e-69
Identity = 132/240 (55.00%), Postives = 168/240 (70.00%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV EGHPDK+CDQISDA+LDA L+ DP  +VACET   T MVMV GEI+T   VD  K+VR+    IG+     G DA+ C VL +I++QS DIA GV      R       E IGAGDQG MFG+AT+ET E+MPL   +A KL  +L EVRKN T ++LRPDGKTQVTVEY ++     PVR+  V++STQHD  VT ++I  D+ EHVIK V+P ++LD++T +++NP+GRF
Sbjct:    4 LFTSESVTEGHPDKMCDQISDAILDAILKNDPNGRVACETAVTTGMVMVMGEISTNCYVDIPKVVREVISDIGYTRAKYGFDAETCSVLTSIDEQSQDIAMGVDEALESRQGQKDDVEAIGAGDQGIMFGFATNETKEYMPLPINMAHKLSRKLAEVRKNGTLAYLRPDGKTQVTVEYEDNK----PVRIDAVVVSTQHDPEVTQEQIQKDIMEHVIKTVVPNEWLDDETKYYINPTGRF 239          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.538e-69
Identity = 138/242 (57.02%), Postives = 169/242 (69.83%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFT-KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV EGHPDK+CDQISDAVLDA  E+DP+++VACET   T MVMV GEITT   VD  K+VR+T R IG+     G D D C V+ +I++QS DIA GV        G  + ++ + IGAGDQG MFG+A DETPE MP+  +LA KL  +L+EVRKN    +LRPDGK+QVTVEY  D     PVRV TV+ISTQH   V++D I  D+ EHVI PVIP + LDE T + +NP+GRF
Sbjct:    5 LFTSESVTEGHPDKICDQISDAVLDAIYEKDPQARVACETAVTTGMVMVMGEITTNCYVDIPKVVRNTIREIGYDRAKYGFDCDTCAVMTSIDEQSSDIAMGVDKALEAKVGEMSEEQVQAIGAGDQGMMFGFACDETPELMPMPIILAHKLTMKLSEVRKNGKVKYLRPDGKSQVTVEYDGDK----PVRVDTVVISTQHGADVSHDTIEKDIMEHVIIPVIPRELLDEGTKYFINPTGRF 242          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 8.539e-69
Identity = 136/242 (56.20%), Postives = 169/242 (69.83%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFT-KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP ++VACET   T +V+V GEITT   VD  +IVRDT R IG+     G DAD C VL +I++QSPDIA GV        G  T +  E IGAGDQG MFG+A +ET E MP+   LA +L  RL EVRK     +LRPDGKTQVT+E Y++NG   PVRV T+++S QH   +T ++I  D+KE VIKPV+P + LDE T + +NP+GRF
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDRALEAREGQMTDEEIEAIGAGDQGLMFGFACNETEELMPMPISLAHRLARRLAEVRKTDVLPYLRPDGKTQVTIE-YDENGK--PVRVDTIVVSAQHHPEITQEQIQRDIKEQVIKPVVPAELLDENTKYFINPTGRF 245          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_LACSS (S-adenosylmethionine synthetase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=metK PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.457e-68
Identity = 133/243 (54.73%), Postives = 172/243 (70.78%), Query Frame = 2
Query:   92 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            E  LFTSESV+EGHPDK+ DQISDA+LDA LEQDP+++VACET   T +V+V GEI+T A VD +K+VR+T + IG+     G D D+C V+V +++QSPDIAQGV      R +D      IGAGDQG MFG+A D+TPE MPL   L+ +L  ++ E+RK+   ++LRPD K QVTVEY  +     P RV TV+ISTQHDE VT + I  D+ E VIK VIP +YLD+KT + +NP+GRF
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLEQDPQARVACETTVTTGLVLVVGEISTTAYVDIQKVVRETIKKIGYRDGQYGFDGDNCAVIVALDEQSPDIAQGVDDSLESREKDEDPLDKIGAGDQGLMFGFAVDQTPELMPLPIALSHRLMRKVAELRKSGQLAYLRPDAKAQVTVEYDENE---QPKRVDTVVISTQHDEDVTLETIQKDMLEQVIKTVIPAEYLDDKTKYFINPTGRF 242          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_BACHD (S-adenosylmethionine synthetase OS=Bacillus halodurans GN=metK PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.902e-68
Identity = 132/242 (54.55%), Postives = 172/242 (71.07%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV EGHPDK+CDQISD++LD  L++DP ++VACET   T +V+V GEITT   VD  K+VRDT R+IG+     G D++ C VL +I++QSPDIAQGV+     R         E IGAGDQG MFGYA +ETPE MPL   L+ KL  RL+E RK     +LRPDGKTQVTVEY  ++ +   VR+ T++ISTQH   VT ++I +DLK+HVI+ V+PE+ +DE+T + +NP+GRF
Sbjct:    9 LFTSESVTEGHPDKICDQISDSILDEILKEDPNARVACETSVTTGLVLVAGEITTSTYVDIPKVVRDTIRNIGYTRAKYGFDSETCAVLTSIDEQSPDIAQGVNQALEAREGQMTDAEIEAIGAGDQGLMFGYANNETPELMPLPISLSHKLARRLSEARKGEILPYLRPDGKTQVTVEYDENDQS---VRIDTIVISTQHHPEVTLEQIESDLKQHVIRSVVPEELIDEETKYFINPTGRF 247          
The following BLAST results are available for this feature:
BLAST of CB290722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CALS81.317e-6957.44S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_BACP22.247e-6957.02S-adenosylmethionine synthetase OS=Bacillus pumilu... [more]
METK_CLOTE3.833e-6957.08S-adenosylmethionine synthetase OS=Clostridium tet... [more]
METK_CLOPS5.006e-6955.83S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOP15.006e-6955.83S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLONN5.006e-6955.00S-adenosylmethionine synthetase OS=Clostridium nov... [more]
METK_CLOCE6.538e-6957.02S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_GEOKA8.539e-6956.20S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK_LACSS1.457e-6854.73S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_BACHD1.902e-6854.55S-adenosylmethionine synthetase OS=Bacillus halodu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290722 ID=CB290722; Name=CB290722; organism=Citrus sinensis; type=EST; length=804bp
GCACTAGGTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCTTAG
ATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTT
CTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGA
CCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGA
GCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTT
GGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGA
CACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCG
ATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCC
CAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGG
TGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTA
TGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAG
GTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCA
GGTCACTGTTGAGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTG
TCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGAT
GAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGA
GAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTT
TTGT
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