CB290722

Overview
NameCB290722
Unique NameCB290722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_LACLS (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=metK PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.108e-59
Identity = 126/246 (51.22%), Postives = 163/246 (66.26%), Query Frame = 2
Query:   92 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP + VACET   T  V VFGEI+T A VD   +VR+T + IG+   + G D     V V++ +QS DIAQGV         +G      + IGAGDQG MFG+AT+ET E+MPL+  L+ KL  +L ++RK+   S+LRPD K+QVTVEY N+  A    RV TV+ISTQH    TN+EI  D+   VIK +IP + LD++T + +NP+GRF
Sbjct:    3 EKHLFTSESVSEGHPDKVADQISDAILDAILAQDPHAHVACETVVYTGTVNVFGEISTSAYVDIAHVVRETIKKIGYTDSENGFDYKSVGVHVSLVEQSSDIAQGVNEAEEVRDKNGQLVDPLDLIGAGDQGMMFGFATNETAEYMPLAISLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEYDNNGKAK---RVDTVVISTQHAAAATNEEIHDDVINKVIKAIIPAELLDDETKYFINPTGRF 245          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_BUCAT (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=metK PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.108e-59
Identity = 120/238 (50.42%), Postives = 160/238 (67.23%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M  +LFTSESV+EGHPDK+ DQISDA+LD  L+QD +++VACET  KT MV++ GEITT A VD E+I R T   IG+V+ D G DA+ C VL  I +QSPDI QG++      P   GAGDQG +FGYAT+ET  FMP     A  L  + +E+RK +   WLRPD K+QVT +Y N N     + + TV++STQH E +T   +   + + +IKPV+P+K+L + T F +NP+GRF
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEILKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRKTINDIGYVNSDAGFDANSCAVLSAIGKQSPDINQGINRF---DPLKQGAGDQGIIFGYATNETEFFMPAPITYAHLLMQKQSELRKKNILPWLRPDAKSQVTFKYNNGN----IIAIDTVVLSTQHQENITQKYLKEAVMDEIIKPVLPDKWLTKNTKFFINPTGRF 231          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_BUCAI (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=metK PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.108e-59
Identity = 120/238 (50.42%), Postives = 160/238 (67.23%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M  +LFTSESV+EGHPDK+ DQISDA+LD  L+QD +++VACET  KT MV++ GEITT A VD E+I R T   IG+V+ D G DA+ C VL  I +QSPDI QG++      P   GAGDQG +FGYAT+ET  FMP     A  L  + +E+RK +   WLRPD K+QVT +Y N N     + + TV++STQH E +T   +   + + +IKPV+P+K+L + T F +NP+GRF
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEILKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRKTINDIGYVNSDAGFDANSCAVLSAIGKQSPDINQGINRF---DPLKQGAGDQGIIFGYATNETEFFMPAPITYAHLLMQKQSELRKKNILPWLRPDAKSQVTFKYNNGN----IIAIDTVVLSTQHQENITQKYLKEAVMDEIIKPVLPDKWLTKNTKFFINPTGRF 231          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_BUCA5 (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=metK PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.108e-59
Identity = 120/238 (50.42%), Postives = 160/238 (67.23%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M  +LFTSESV+EGHPDK+ DQISDA+LD  L+QD +++VACET  KT MV++ GEITT A VD E+I R T   IG+V+ D G DA+ C VL  I +QSPDI QG++      P   GAGDQG +FGYAT+ET  FMP     A  L  + +E+RK +   WLRPD K+QVT +Y N N     + + TV++STQH E +T   +   + + +IKPV+P+K+L + T F +NP+GRF
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEILKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRKTINDIGYVNSDAGFDANSCAVLSAIGKQSPDINQGINRF---DPLKQGAGDQGIIFGYATNETEFFMPAPITYAHLLMQKQSELRKKNILPWLRPDAKSQVTFKYNNGN----IIAIDTVVLSTQHQENITQKYLKEAVMDEIIKPVLPDKWLTKNTKFFINPTGRF 231          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_XANCB (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. campestris (strain B100) GN=metK PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.753e-59
Identity = 120/240 (50.00%), Postives = 160/240 (66.67%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVR--KNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VACET  KT + +V GE+TT A +D E + R     IG+ S DVG D + C VL  I +QSPDI QGV     K PE  GAGDQG MFGYAT+ET  +MP +  L+ +L  +  ++R  KNS  SWLRPD K+QVT+ Y +     V   +  V++STQHD  V   ++   ++E ++KPV+P K+L + T FH+NP+G+F
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSYMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDG----VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKF 233          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_XANC8 (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=metK PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.753e-59
Identity = 120/240 (50.00%), Postives = 160/240 (66.67%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVR--KNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VACET  KT + +V GE+TT A +D E + R     IG+ S DVG D + C VL  I +QSPDI QGV     K PE  GAGDQG MFGYAT+ET  +MP +  L+ +L  +  ++R  KNS  SWLRPD K+QVT+ Y +     V   +  V++STQHD  V   ++   ++E ++KPV+P K+L + T FH+NP+G+F
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSYMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDG----VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKF 233          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_NEIMF (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=metK PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.753e-59
Identity = 119/242 (49.17%), Postives = 166/242 (68.60%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI----GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M  +LFTSESV+EGHPDK+ DQ+SDA+LDA L QDP+++VA ET   T + ++ GEITT A+VDY K+ R+T + IG+ S ++G DA+ C V V  +QQSPDIAQGV+       E I    GAGDQG MFGYA DETP  MP +   + +L  R +E+RK+    WLRPD K Q+TV Y +++G +   R+ TV++STQHD  +  +E+   + E +IKPV+P + L ++T + +NP+GRF
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN-----EGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGLLPWLRPDAKAQLTVVYDSESGKV--KRIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPSELLTDETKYLINPTGRF 235          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_HAMD5 (S-adenosylmethionine synthetase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=metK PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.753e-59
Identity = 125/234 (53.42%), Postives = 156/234 (66.67%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV+EGHPDK+ DQISDAVLDA L QDP+++VACET  KT MV+V GEITT A VD E+I R T   IG+V  D+G DA  C VL  I +QSPDI QGV       P D GAGDQG MFGYAT+ET   MP     + +L  R +E+RK     WLRPD K+Q+T +Y  D G    V + T++ STQH+E VT  ++   + E +IKPVIP ++L   T + +NP+GRF
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILIQDPKARVACETYVKTGMVIVGGEITTSAWVDIEEITRCTLAEIGYVHSDMGFDAHSCAVLSAIGKQSPDINQGVD---RIDPLDQGAGDQGMMFGYATNETDVLMPAPITYSHRLVKRQSEMRKIGQLPWLRPDAKSQITFKY--DKG--YAVAIDTIVFSTQHEEDVTQKQLEEAVMEEIIKPVIPTQWLSSSTKYFINPTGRF 231          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ANADF (S-adenosylmethionine synthetase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=metK PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.753e-59
Identity = 124/236 (52.54%), Postives = 160/236 (67.80%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI-GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            +LFTSESV EGHPDK+ DQISDAVLDA L QD + +VACET  KT  VM+ GEITT A+++Y K+ R+  + IG+VS D+G D + C VLV ++QQSPDI QGV         D+ GAGDQG MFGYA DET E MP     A  +  +L + R+     +LRPDGK+QVTVEY    G  V  R+ TV++STQH E+V+N ++ A L+E VI   +P+K +D KT   +NP+GRF
Sbjct:    6 YLFTSESVTEGHPDKMADQISDAVLDAVLAQDKKGRVACETLLKTGYVMIAGEITTTARIEYPKLAREVVKRIGYVSGDMGFDGNTCGVLVAVDQQSPDIGQGV---------DVGGAGDQGMMFGYACDETNELMPAPIQYAHAVTRQLAKARRGG-LDFLRPDGKSQVTVEY---RGGKV-ARIDTVVVSTQHSESVSNRKLHAALREEVIAKALPKKLVDRKTKVFINPTGRF 227          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_NEIM0 (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metK PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.596e-59
Identity = 119/242 (49.17%), Postives = 165/242 (68.18%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI----GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M  +LFTSESV+EGHPDK+ DQ+SDA+LDA L QDP+++VA ET   T + ++ GEITT A+VDY K+ R+T + IG+ S ++G DA+ C V V  +QQSPDIAQGV+       E I    GAGDQG MFGYA DETP  MP +   + +L  R +E+RK+    WLRPD K Q+TV Y ++ G +   R+ TV++STQHD  +  +E+   + E +IKPV+P + L ++T + +NP+GRF
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN-----EGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETGKV--KRIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPSELLTDETKYLINPTGRF 235          
The following BLAST results are available for this feature:
BLAST of CB290722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LACLS2.108e-5951.22S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_BUCAT2.108e-5950.42S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCAI2.108e-5950.42S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCA52.108e-5950.42S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_XANCB2.753e-5950.00S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_XANC82.753e-5950.00S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_NEIMF2.753e-5949.17S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_HAMD52.753e-5953.42S-adenosylmethionine synthetase OS=Hamiltonella de... [more]
METK_ANADF2.753e-5952.54S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK_NEIM03.596e-5949.17S-adenosylmethionine synthetase OS=Neisseria menin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290722 ID=CB290722; Name=CB290722; organism=Citrus sinensis; type=EST; length=804bp
GCACTAGGTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCTTAG
ATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTT
CTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGA
CCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGA
GCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTT
GGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGA
CACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCG
ATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCC
CAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGG
TGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTA
TGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAG
GTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCA
GGTCACTGTTGAGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTG
TCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGAT
GAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGA
GAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTT
TTGT
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