CB290722

Overview
NameCB290722
Unique NameCB290722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ACIBY (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain AYE) GN=metK PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.366e-58
Identity = 117/237 (49.37%), Postives = 154/237 (64.98%), Query Frame = 2
Query:   92 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++   + E +IKP+IP +     T FH+NP+G F
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFHINPTGMF 232          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ACIBT (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=metK PE=3 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 1.366e-58
Identity = 117/237 (49.37%), Postives = 154/237 (64.98%), Query Frame = 2
Query:   92 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++   + E +IKP+IP +     T FH+NP+G F
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFHINPTGMF 232          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ACIBS (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain SDF) GN=metK PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.366e-58
Identity = 117/237 (49.37%), Postives = 154/237 (64.98%), Query Frame = 2
Query:   92 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++   + E +IKP+IP +     T FH+NP+G F
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFHINPTGMF 232          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ACIBC (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ACICU) GN=metK PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.366e-58
Identity = 117/237 (49.37%), Postives = 154/237 (64.98%), Query Frame = 2
Query:   92 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++   + E +IKP+IP +     T FH+NP+G F
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFHINPTGMF 232          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_SYNS3 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9311) GN=metK PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.785e-58
Identity = 128/253 (50.59%), Postives = 159/253 (62.85%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPV---IPEKYLDEKTIFHLNPSGRF 802
            M  ++FTSESV EGHPDK+CDQ+SDAVLDA L QD  S+VACET   T + M+ GE+T+KA+VD+  +VRD  R IG+      G DA  C VLV ++QQSPDIAQGV     H     + +GAGDQG MFGYA +ETPE MPL   LA +L  RL EVR N T  +L PDGKTQV+V Y ND     PV + T+LISTQH        DE    + I+ DL  HV+ P    +P K       + +NP+G+F
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDSTSRVACETVVNTGLCMITGEVTSKAQVDFIHLVRDVIRDIGYSGARAGGFDATSCAVLVALDQQSPDIAQGVDEADDHAGDPLDKVGAGDQGIMFGYACNETPELMPLPISLAHRLARRLAEVRHNGTLDYLLPDGKTQVSVVYENDK----PVEIDTILISTQHTAEVTGLTDEQEVRNRISEDLWTHVVLPATADLPLKPDRANCRYLVNPTGKF 249          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_DESMR (S-adenosylmethionine synthetase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=metK PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.785e-58
Identity = 115/235 (48.94%), Postives = 157/235 (66.81%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            +LF+SESV EGHPDK+ DQISD +LDA L QDP++ VACET   T +  + GEITTKA  D+  IVR+T + IG+ S  +G D + C V+ ++++QS DIAQGV      +PED GAGDQG MFG+A DET   MP     A KL  RLTEVRK+    +LRPDGKTQV VEY +      PVR+  V++++QH E +++ ++   +K+ VI   +PE  +D+ T  ++N +GRF
Sbjct:    8 YLFSSESVTEGHPDKVADQISDGILDAILAQDPDAHVACETLVTTGLAFIAGEITTKAYADFPSIVRETVKEIGYNSSTMGFDWETCAVISSVDKQSVDIAQGVS---RTKPEDQGAGDQGMMFGFACDETETLMPAPIYWAHKLSRRLTEVRKSGVLDFLRPDGKTQVAVEYVDGK----PVRIDNVVVASQHAENISHADLCDAVKKEVIFHTLPESLVDKNTKIYINTTGRF 235          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_BIFLO (S-adenosylmethionine synthetase OS=Bifidobacterium longum GN=metK PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.785e-58
Identity = 129/247 (52.23%), Postives = 160/247 (64.78%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE----KYLDEKTIFHLNPSGRF 802
            L ++ESV EGHPDK+CDQISDA+LD  L QD  S VA ET   T + +VFGE+T++   D +  VR+T R+IG+ S +VGLDAD C V+V I +QS +I QGV              +R E  GAGDQG MFGYATDETP  MPL   LA +L   LTEVRK+     LRPDGKTQVT+EY +D+    PVR+ TVLISTQHD  VT D +A +LK+HVI PV+ E    K   +     +NP+G F
Sbjct:    7 LISAESVTEGHPDKVCDQISDAILDDLLAQDSSSHVAVETSAATGVFLVFGEVTSEGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGVARLTGDQETAASREERYEAQGAGDQGVMFGYATDETPTLMPLPIYLAHRLAFHLTEVRKSGEVPHLRPDGKTQVTIEYDDDD---KPVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDEVLGSKVPHDNYRQLVNPTGSF 250          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_PROM3 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9303) GN=metK PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.044e-58
Identity = 125/253 (49.41%), Postives = 162/253 (64.03%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGVH---GHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPV---IPEKYLDEKTIFHLNPSGRF 802
            M  ++FTSESV EGHPDK+CDQ+SDAVLDA L QDP S+VACET   T + ++ GE+T+ ++VD+  +VR+  R IG+      G DA  C VLV ++QQSPDIAQGV+    H     + +GAGDQG MFGYA D+TPE MPL   LA +L  +L  VR + + S+L PDGKTQV+V Y ND     PV + T+LISTQH        DE    + I  DL  HV++P    +P K   E T F +NP+G+F
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPSSRVACETVVNTGLCLITGEVTSNSQVDFIHLVRNVIREIGYSGARAGGFDATSCAVLVALDQQSPDIAQGVNEADDHSGDPLDKVGAGDQGIMFGYACDDTPELMPLPISLAHRLARQLAAVRHDGSLSYLLPDGKTQVSVVYENDR----PVAIDTILISTQHTSEVEGISDENGIRERITQDLWTHVVEPATADLPLKPNREATRFLVNPTGKF 249          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_AZOSB (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain BH72) GN=metK PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.044e-58
Identity = 116/235 (49.36%), Postives = 159/235 (67.66%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            FLFTSESV+EGHPDK+ DQISD VLDA L +DP+++VACET   T +V++ GEITT A  +Y +I +D  R IG+ + D+G D   C VL  I +QS DIAQGV+        D GAGDQG MFGYAT+ETP  MPL    A ++  R  EVRK+    WLRPD K+Q+TV+Y +      PV + TV++STQH+  V++ +I+  + E +IKPV+P++ +  +  + +NP+GRF
Sbjct:    5 FLFTSESVSEGHPDKVADQISDGVLDAILAEDPKARVACETLVSTGLVVISGEITTSAHPNYREIAQDVVRRIGYDNSDIGFDYKSCAVLAAINRQSSDIAQGVN-EGEGLDLDQGAGDQGLMFGYATNETPSLMPLPIYYAHRIMQRQAEVRKDGRLPWLRPDAKSQLTVKYVDGK----PVAIDTVVVSTQHNPEVSHAQISEAVIEEIIKPVLPKELMQGEVRYLINPTGRF 234          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_SYNP2 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=metK PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.193e-58
Identity = 124/252 (49.21%), Postives = 164/252 (65.08%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETV--------TNDEIAADLKEHVIKPVI--PEKYLDEKTIFHLNPSGRF 802
            +LFTSESV EGHPDK+CDQISDA+LDA L  DP S+VA E  T T +V++ GE+TT+A V++ ++ R   + IG+ + D G  A+ C V+V +++QSPDIAQGV     +R        ++IGAGDQG MFGYA +ETPEFMPL   LA +L  +L++VRK+    +L PDGKTQVTV Y +      PV + T+LISTQH ET+           +I ADL E VIKPV       L + T F +NP+G+F
Sbjct:    5 YLFTSESVTEGHPDKICDQISDAILDAVLAADPSSRVAAEVVTNTGLVLITGELTTQANVNFIQVARQKIKEIGYTNADNGFSANSCSVMVALDEQSPDIAQGVTSAQEQRDKLSDDQLDEIGAGDQGLMFGYACNETPEFMPLPISLAHRLSLKLSQVRKSGELPYLGPDGKTQVTVIYEDGK----PVGIDTILISTQHTETIGALTDNTEIQAKIKADLLEKVIKPVFVGATVGLSDSTKFLVNPTGKF 252          
The following BLAST results are available for this feature:
BLAST of CB290722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACIBY1.366e-5849.37S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBT1.366e-5849.37S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBS1.366e-5849.37S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBC1.366e-5849.37S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_SYNS31.785e-5850.59S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_DESMR1.785e-5848.94S-adenosylmethionine synthetase OS=Desulfovibrio m... [more]
METK_BIFLO1.785e-5852.23S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_PROM33.044e-5849.41S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_AZOSB3.044e-5849.36S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_SYNP25.193e-5849.21S-adenosylmethionine synthetase OS=Synechococcus s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290722 ID=CB290722; Name=CB290722; organism=Citrus sinensis; type=EST; length=804bp
GCACTAGGTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCTTAG
ATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTT
CTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGA
CCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGA
GCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTT
GGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGA
CACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCG
ATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCC
CAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGG
TGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTA
TGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAG
GTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCA
GGTCACTGTTGAGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTG
TCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGAT
GAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGA
GAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTT
TTGT
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