CB290722

Overview
NameCB290722
Unique NameCB290722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_HAEIN (S-adenosylmethionine synthetase OS=Haemophilus influenzae GN=metK PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.782e-58
Identity = 120/238 (50.42%), Postives = 159/238 (66.81%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M ++LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   ++G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET   MP +   A +L  + +EVRK+   +WLRPD K+QVT++ Y DN     V V  V++STQH E V+  ++   + E +IKPV+P ++L ++T F +NP+GRF
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRKVICDIGYEHSEMGFDGHSCAVLNAIGKQSADINQGVD---RENPLDQGAGDQGIMFGYATNETDVLMPAAITYAHRLMEKQSEVRKSGKLAWLRPDAKSQVTLK-YEDNKI---VGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPSEWLSKETKFFINPTGRF 231          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ALHEH (S-adenosylmethionine synthetase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=metK PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.782e-58
Identity = 114/238 (47.90%), Postives = 158/238 (66.39%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M  +LFTSESV+EGHPDK+ DQISDAVLDA L +DP  ++ACET  KT ++++ GE+TT A +DYE + R+T + IG+   ++G D + C V+  + +QS DIAQGV       PE+ GAGDQG MFGYA++ET   MP     A +L  R  EVR N    WLRPD K+QVT+ Y +      PV V TV++STQH   +T  ++   + E +IKPV+PE+++  +T + +NP+GRF
Sbjct:    1 MSEYLFTSESVSEGHPDKMADQISDAVLDAILAEDPRGRIACETMIKTGIIILGGEVTTSANIDYEAVARETVKRIGYKHHEMGFDGETCGVINILGKQSVDIAQGVD---RDHPEEQGAGDQGLMFGYASNETDVLMPAPITYAHRLVQRQAEVRCNGQLPWLRPDAKSQVTLRYVDGR----PVAVDTVVLSTQHAPDLTQAQVHEAVIEEIIKPVLPEQWITGETRYLVNPTGRF 231          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_XYLFT (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metK PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58
Identity = 117/240 (48.75%), Postives = 159/240 (66.25%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRK--NSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QDP ++VACET  KT + ++ GEITT A VD E + R     IG+ S DVG D   C VL  I +QSPDI QGV     K+ E+ GAGDQG MFGYAT+ET  +MP +  ++ +L  +  ++RK  NS   WLRPD K Q+T+ Y +     V   +  V++STQHD  +   ++   ++E ++KPV+P K+L + T FH+NP+G+F
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILVQDPRARVACETMVKTGVAIIAGEITTSAWVDLEALTRKVIVDIGYNSSDVGFDGATCGVLNLIGKQSPDINQGVD---RKKAEEQGAGDQGLMFGYATNETDSYMPAAIHISHRLVEQQAKIRKKSNSLLPWLRPDAKAQITLRYEDG----VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLPSKWLHKGTKFHINPTGKF 233          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_XYLFM (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain M12) GN=metK PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58
Identity = 117/240 (48.75%), Postives = 159/240 (66.25%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRK--NSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QDP ++VACET  KT + ++ GEITT A VD E + R     IG+ S DVG D   C VL  I +QSPDI QGV     K+ E+ GAGDQG MFGYAT+ET  +MP +  ++ +L  +  ++RK  NS   WLRPD K Q+T+ Y +     V   +  V++STQHD  +   ++   ++E ++KPV+P K+L + T FH+NP+G+F
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILVQDPRARVACETMVKTGVAIIAGEITTSAWVDLEALTRKVIVDIGYNSSDVGFDGATCGVLNLIGKQSPDINQGVD---RKKAEEQGAGDQGLMFGYATNETDSYMPAAIHISHRLVEQQAKIRKKSNSPLPWLRPDAKAQITLRYEDG----VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLPSKWLHKGTKFHINPTGKF 233          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_XYLFA (S-adenosylmethionine synthetase OS=Xylella fastidiosa GN=metK PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58
Identity = 117/240 (48.75%), Postives = 159/240 (66.25%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRK--NSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QDP ++VACET  KT + ++ GEITT A VD E + R     IG+ S DVG D   C VL  I +QSPDI QGV     K+ E+ GAGDQG MFGYAT+ET  +MP +  ++ +L  +  ++RK  NS   WLRPD K Q+T+ Y +     V   +  V++STQHD  +   ++   ++E ++KPV+P K+L + T FH+NP+G+F
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILVQDPRARVACETMVKTGVAIIAGEITTSAWVDLEALTRKVIVDIGYNSSDVGFDGATCGVLNLIGKQSPDINQGVD---RKKAEEQGAGDQGLMFGYATNETDSYMPAAIHISHRLVEQQAKIRKKSNSPLPWLRPDAKAQITLRYEDG----VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLPSKWLHKGTKFHINPTGKF 233          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_XYLF2 (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain M23) GN=metK PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58
Identity = 117/240 (48.75%), Postives = 159/240 (66.25%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRK--NSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QDP ++VACET  KT + ++ GEITT A VD E + R     IG+ S DVG D   C VL  I +QSPDI QGV     K+ E+ GAGDQG MFGYAT+ET  +MP +  ++ +L  +  ++RK  NS   WLRPD K Q+T+ Y +     V   +  V++STQHD  +   ++   ++E ++KPV+P K+L + T FH+NP+G+F
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILVQDPRARVACETMVKTGVAIIAGEITTSAWVDLEALTRKVIVDIGYNSSDVGFDGATCGVLNLIGKQSPDINQGVD---RKKAEEQGAGDQGLMFGYATNETDSYMPAAIHISHRLVEQQAKIRKKSNSLLPWLRPDAKAQITLRYEDG----VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLPSKWLHKGTKFHINPTGKF 233          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_THET8 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=metK PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58
Identity = 125/242 (51.65%), Postives = 155/242 (64.05%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR------PED-IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL-DEKTIFHLNPSGRF 802
            L TSESV EGHPDKL D+ISDA+LDA + QD +++VA ET   T +V V GEITT+  VD   +VR T R +G+     G DAD C VL  I++QSPDIA GV+  +  R      P D +GAGDQG MFGYATDETPE MPL   LA +L  RL EVRK     +LRPDGK QVTV Y  D     P+ V TV++S QH   V  +++  DL   V++  IP +YL D +T + +NPSGRF
Sbjct:    6 LVTSESVTEGHPDKLADRISDAILDALIAQDKKARVAAETLVTTGLVFVAGEITTEGYVDIPNLVRKTVREVGYTRAKYGFDADTCAVLTAIDEQSPDIAGGVNLSYEWRVLKSTDPLDRVGAGDQGLMFGYATDETPELMPLPITLAHRLTMRLAEVRKTGLLPYLRPDGKAQVTVVYEGDK----PLYVKTVVVSAQHSPEVEQEQLREDLIREVVRQAIPPEYLKDGETEYLINPSGRF 243          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_THET2 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=metK PE=3 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58
Identity = 125/242 (51.65%), Postives = 155/242 (64.05%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR------PED-IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL-DEKTIFHLNPSGRF 802
            L TSESV EGHPDKL D+ISDA+LDA + QD +++VA ET   T +V V GEITT+  VD   +VR T R +G+     G DAD C VL  I++QSPDIA GV+  +  R      P D +GAGDQG MFGYATDETPE MPL   LA +L  RL EVRK     +LRPDGK QVTV Y  D     P+ V TV++S QH   V  +++  DL   V++  IP +YL D +T + +NPSGRF
Sbjct:    6 LVTSESVTEGHPDKLADRISDAILDALIAQDKKARVAAETLVTTGLVFVAGEITTEGYVDIPNLVRKTVREVGYTRAKYGFDADTCAVLTAIDEQSPDIAGGVNLSYEWRVLKSTDPLDRVGAGDQGLMFGYATDETPELMPLPITLAHRLTMRLAEVRKTGLLPYLRPDGKAQVTVVYEGDK----PLYVKTVVVSAQHSPEVEQEQLREDLIREVVRQAIPPEYLKDGETEYLINPSGRF 243          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_HAEIG (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain PittGG) GN=metK PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58
Identity = 120/238 (50.42%), Postives = 158/238 (66.39%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M ++LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   ++G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET   MP +   A +L  +  EVRK+   +WLRPD K+QVT++ Y DN     V V  V++STQH E V+  ++   + E +IKPV+P ++L ++T F +NP+GRF
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRKVICDIGYEHSEMGFDGHSCAVLNAIGKQSADINQGVD---RENPLDQGAGDQGIMFGYATNETDVLMPAAITYAHRLMEKQAEVRKSGKLAWLRPDAKSQVTLK-YEDNKI---VGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPSEWLSKETKFFINPTGRF 231          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_COLP3 (S-adenosylmethionine synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=metK PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58
Identity = 115/238 (48.32%), Postives = 155/238 (65.13%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M    FTSESV+EGHPDK+ DQISDAVLDA + +D  ++VACET  KT + ++ GE++T A VD EK+ R+    IG+ S DVG D   C ++  I QQSP+IAQGV       PE+ GAGDQG MFGYAT+ETP  MP     + +L  R  E RK+    WLRPD K+QVT   Y DN    PV + TV++STQH+  +  +++ + + E++I  V+P + L E T +H+NP+GRF
Sbjct:    1 MSRHFFTSESVSEGHPDKIADQISDAVLDAIIAKDKHARVACETMVKTGVAIISGEVSTNAWVDLEKLTRNVISDIGYTSSDVGFDGATCGIMNLIGQQSPEIAQGVD---RSNPEEQGAGDQGLMFGYATNETPTLMPAPLYYSHRLVERQAEARKSGVLPWLRPDAKSQVTF-IYEDN---KPVAIDTVVLSTQHNPDIKQEDLVSAVMENIINHVLPAELLTEDTKYHINPTGRF 231          
The following BLAST results are available for this feature:
BLAST of CB290722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_HAEIN6.782e-5850.42S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_ALHEH6.782e-5847.90S-adenosylmethionine synthetase OS=Alkalilimnicola... [more]
METK_XYLFT8.857e-5848.75S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_XYLFM8.857e-5848.75S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_XYLFA8.857e-5848.75S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_XYLF28.857e-5848.75S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_THET88.857e-5851.65S-adenosylmethionine synthetase OS=Thermus thermop... [more]
METK_THET28.857e-5851.65S-adenosylmethionine synthetase OS=Thermus thermop... [more]
METK_HAEIG8.857e-5850.42S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_COLP38.857e-5848.32S-adenosylmethionine synthetase OS=Colwellia psych... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290722 ID=CB290722; Name=CB290722; organism=Citrus sinensis; type=EST; length=804bp
GCACTAGGTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCTTAG
ATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTT
CTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGA
CCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGA
GCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTT
GGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGA
CACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCG
ATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCC
CAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGG
TGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTA
TGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAG
GTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCA
GGTCACTGTTGAGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTG
TCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGAT
GAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGA
GAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTT
TTGT
back to top