CB290722

Overview
NameCB290722
Unique NameCB290722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_LEPBL (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=metK PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.973e-57
Identity = 122/241 (50.62%), Postives = 161/241 (66.80%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            ++ F+FTSESV EGHPDK+CDQISDA+LDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ETPEFMP+    + +L   L  +R ++   +LRPD K+QVTVEY +      PVRV TV+ISTQH   V + +I   L E  IK VIP   L   T + +NP+G+F
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPEFMPMPIYYSHELVKHLAGLRHSNKLKFLRPDAKSQVTVEYKDGK----PVRVDTVVISTQHSPDVAHKQIEESLIEECIKKVIPANLL-VNTKYFINPTGQF 234          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_LEPBJ (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=metK PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.973e-57
Identity = 122/241 (50.62%), Postives = 161/241 (66.80%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            ++ F+FTSESV EGHPDK+CDQISDA+LDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ETPEFMP+    + +L   L  +R ++   +LRPD K+QVTVEY +      PVRV TV+ISTQH   V + +I   L E  IK VIP   L   T + +NP+G+F
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPEFMPMPIYYSHELVKHLAGLRHSNKLKFLRPDAKSQVTVEYKDGK----PVRVDTVVISTQHSPDVAHKQIEESLIEECIKKVIPANLL-VNTKYFINPTGQF 234          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_HERAR (S-adenosylmethionine synthetase OS=Herminiimonas arsenicoxydans GN=metK PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.973e-57
Identity = 118/235 (50.21%), Postives = 160/235 (68.09%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            FLFTSESV+EGHPDK+ DQISDA+LDA  +QDP+++VA ET   T +V++ GEITT A VDY ++ RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DETPE MP +   A ++  R +E+RK+    WLRPD K+QVT+ Y +      PV + T+++STQH   + + +I   + E +IKPV+P ++L + T F +NP+GRF
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFQQDPKARVAAETLCNTGLVVLAGEITTFANVDYIEVARDTIKRIGYDNADYGIDYKSCSVLVAYDKQSPDIAQGV-DEGAGIDLDQGAGDQGLMFGYACDETPELMPAAIHYAHRIVERQSELRKDGRLPWLRPDAKSQVTLRYVDGR----PVSIDTIVLSTQHAPEMQHKDIEEAVIESIIKPVVPAEWLKD-TRFLVNPTGRF 233          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_LEPIN (S-adenosylmethionine synthetase OS=Leptospira interrogans GN=metK PE=3 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.577e-57
Identity = 122/241 (50.62%), Postives = 161/241 (66.80%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            ++ F+FTSESV EGHPDK+CDQISDAVLDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ETPE MP+    + +L   L  +R  +   +LRPD K+QVTVEY +      PVR+ TV+ISTQH   VT+ +I   L E  IK VIP   L+  T + +NP+G+F
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAVLDAYLEQDPKSRVACETLVTTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPELMPMPIYYSHELVKHLAGLRHGNKLKFLRPDAKSQVTVEYKDGK----PVRIDTVVISTQHSPDVTHKQIEEALIEECIKKVIPANLLN-NTKYFINPTGQF 234          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_LEPIC (S-adenosylmethionine synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=metK PE=3 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.577e-57
Identity = 122/241 (50.62%), Postives = 161/241 (66.80%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            ++ F+FTSESV EGHPDK+CDQISDAVLDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ETPE MP+    + +L   L  +R  +   +LRPD K+QVTVEY +      PVR+ TV+ISTQH   VT+ +I   L E  IK VIP   L+  T + +NP+G+F
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAVLDAYLEQDPKSRVACETLVTTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPELMPMPIYYSHELVKHLAGLRHGNKLKFLRPDAKSQVTVEYKDGK----PVRIDTVVISTQHSPDVTHKQIEEALIEECIKKVIPANLLN-NTKYFINPTGQF 234          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_PROM0 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9301) GN=metK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.366e-57
Identity = 125/253 (49.41%), Postives = 168/253 (66.40%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGVHGH---FTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHD---ETVTNDE-----IAADLKEHVIKPVIPEKYLD---EKTIFHLNPSGRF 802
            M  F+FTSESV EGHPDK+CDQISDAVLDA L +DPES+VACET   T + ++ GEIT+KAKVDY K+VR+  + IG+      G DA+ C VLV +++QSPDI+QGV+          ++ GAGDQG MFGYA DETPE MPL   LA +L  +L +VR     ++L PDGKTQV+++Y       +PV ++T+LISTQH+   + VTN+E     I  DL ++V+ P   +  +     KT F +NP+G+F
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVNDADDINDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHEEVLNYLLPDGKTQVSIDYEKG----LPVSINTILISTQHNSEIDGVTNEEEIRQRIKEDLWKNVVIPATEDLEIKPNISKTRFLVNPTGKF 249          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_CORU7 (S-adenosylmethionine synthetase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=metK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.366e-57
Identity = 124/249 (49.80%), Postives = 156/249 (62.65%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEK----YLDEKTIFHLNPSGRF 802
            M   LFTSESV EGHPDK+CD ISD +LDA L +DP+++VA ET   T +V V GE+ T   V+  ++VRDT + IGF S D+G D   C V V+I  QSP+I  GV           T   +  GAGDQG MFGYAT+ETPE+MPL   +A +L  RLTEVRK    + LRPDGKTQVT EY   + A  PVR+ TV+ISTQHD   T DE+   L EHV+  V+ ++    ++ E     +NPSG F
Sbjct:    1 MSKRLFTSESVTEGHPDKICDAISDTILDAMLTEDPQARVAVETVVTTGLVHVVGEVRTSGYVEIPQLVRDTLKEIGFTSSDMGFDGTTCGVSVSIGAQSPEIGAGVDTSHEVRGSSSTDEDDRQGAGDQGLMFGYATNETPEYMPLPISVAHRLSRRLTEVRKEEIVTGLRPDGKTQVTFEY---DDAGTPVRLDTVVISTQHDPERTQDELRELLSEHVVGHVLADESLKPFVTEDLNLLVNPSGSF 246          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.396e-57
Identity = 120/238 (50.42%), Postives = 153/238 (64.29%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DETP+ MP     A +L  R +E+RK+    WLRPD K+QVT  Y +      P  V TV++STQH   ++   I   + E +IKP  PE  +  KT F +NP+GRF
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPEGLITPKTKFLVNPTGRF 235          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 4.396e-57
Identity = 120/238 (50.42%), Postives = 153/238 (64.29%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DETP+ MP     A +L  R +E+RK+    WLRPD K+QVT  Y +      P  V TV++STQH   ++   I   + E +IKP  PE  +  KT F +NP+GRF
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPEGLITPKTKFLVNPTGRF 235          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_BORBR (S-adenosylmethionine synthetase OS=Bordetella bronchiseptica GN=metK PE=3 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 4.396e-57
Identity = 120/238 (50.42%), Postives = 153/238 (64.29%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DETP+ MP     A +L  R +E+RK+    WLRPD K+QVT  Y +      P  V TV++STQH   ++   I   + E +IKP  PE  +  KT F +NP+GRF
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPEGLITPKTKFLVNPTGRF 235          
The following BLAST results are available for this feature:
BLAST of CB290722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LEPBL1.973e-5750.62S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_LEPBJ1.973e-5750.62S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_HERAR1.973e-5750.21S-adenosylmethionine synthetase OS=Herminiimonas a... [more]
METK_LEPIN2.577e-5750.62S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_LEPIC2.577e-5750.62S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_PROM03.366e-5749.41S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_CORU73.366e-5749.80S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_BORPE4.396e-5750.42S-adenosylmethionine synthetase OS=Bordetella pert... [more]
METK_BORPA4.396e-5750.42S-adenosylmethionine synthetase OS=Bordetella para... [more]
METK_BORBR4.396e-5750.42S-adenosylmethionine synthetase OS=Bordetella bron... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290722 ID=CB290722; Name=CB290722; organism=Citrus sinensis; type=EST; length=804bp
GCACTAGGTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCTTAG
ATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTT
CTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGA
CCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGA
GCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTT
GGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGA
CACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCG
ATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCC
CAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGG
TGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTA
TGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAG
GTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCA
GGTCACTGTTGAGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTG
TCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGAT
GAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGA
GAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTT
TTGT
back to top