CB290722

Overview
NameCB290722
Unique NameCB290722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.721e-56
Identity = 114/235 (48.51%), Postives = 158/235 (67.23%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            + FTSESV+EGHPDK+ DQISD++LDA L QDP ++VA ET   T +V++ GEITT A VDY ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MPL   L+ +L  R +++R++   +WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++   + E +IKPV+P+  +     F +NP+GRF
Sbjct:    5 YFFTSESVSEGHPDKVADQISDSILDAILAQDPTARVAAETLCNTGLVVLAGEITTNANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDD-GLDQGAGDQGLMFGYACDETAELMPLPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEDISLEKLREAVIEEIIKPVLPKHLIKGAINFLVNPTGRF 234          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.721e-56
Identity = 117/234 (50.00%), Postives = 153/234 (65.38%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            +FTSESV+EGHPDKL DQISDAVLDA L  DP ++VACET  KT + +V GEITT A VD E +VR   + I + S +VG D D C V+  I +QS DIAQGV     ++PED GAGDQG MFGYA++ET   MP     + +L  R  E RK+    WLRPD K+QVT  Y  +NG +  V +  V++STQHD  VT  ++   + E ++K  +P + L + T FH+NP+G+F
Sbjct:    6 IFTSESVSEGHPDKLADQISDAVLDAILTDDPHARVACETMVKTGVAIVGGEITTSAWVDLEDLVRGVIKDIDYTSSEVGYDGDTCGVINIIGKQSVDIAQGVD---RQKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHRLVQRQAEARKSGLLPWLRPDAKSQVTCRY--ENGKV--VGIDAVVLSTQHDPDVTQADLKEAVMELIVKHTLPAELLHKDTQFHINPTGKF 232          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ANAVT (S-adenosylmethionine synthetase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=metK PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.721e-56
Identity = 123/252 (48.81%), Postives = 156/252 (61.90%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPVIPEKYL--DEKTIFHLNPSGRF 802
            +LFTSESV EGHPDK+CDQISD +LD  L QDP S+VA E    T +V++ GEITTKA V+Y  I R     IG+ + D G  A    V+V +++QSPDIAQGV+     R +D       IGAGDQG MFG+A +ETPE MPL   LA ++  RL  VRK    S+LRPDGKTQVTV Y +      PV + TVLISTQH        DE     +I  DL   V++PV  +  +  D++T F +NP+G+F
Sbjct:    5 YLFTSESVTEGHPDKICDQISDTILDTLLTQDPTSRVAAEVVVNTGLVLITGEITTKANVNYANIARQKIAEIGYTNADNGFSASSTSVIVALDEQSPDIAQGVNTAQETREQDSEELFDKIGAGDQGIMFGFACNETPELMPLPICLAHRIARRLAAVRKTGELSYLRPDGKTQVTVVYEDGR----PVGIDTVLISTQHTATIGDITDEAAVQAKIKQDLWTAVVEPVFGDLEIKPDQETRFLVNPTGKF 252          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ACTPJ (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metK PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.721e-56
Identity = 116/234 (49.57%), Postives = 151/234 (64.53%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G DA  C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  +  +VRK+    WLRPD K+Q+T  Y N+      V +  V++STQH E V+  ++   + E +IKPV+P ++L + T + +NP+GRF
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGVD---RADPLEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMEQQAKVRKSGKLDWLRPDAKSQLTFAYENNK----IVGIDAVVLSTQHAEHVSQKDLVEGVMEEIIKPVLPSEWLSQNTKYFINPTGRF 231          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ACTP7 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metK PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.721e-56
Identity = 116/234 (49.57%), Postives = 151/234 (64.53%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G DA  C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  +  +VRK+    WLRPD K+Q+T  Y N+      V +  V++STQH E V+  ++   + E +IKPV+P ++L + T + +NP+GRF
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGVD---RADPLEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMEQQAKVRKSGKLDWLRPDAKSQLTFAYENNK----IVGIDAVVLSTQHAEHVSQKDLVEGVMEEIIKPVLPSEWLSQNTKYFINPTGRF 231          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ACTP2 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metK PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.721e-56
Identity = 116/234 (49.57%), Postives = 151/234 (64.53%), Query Frame = 2
Query:  101 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G DA  C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  +  +VRK+    WLRPD K+Q+T  Y N+      V +  V++STQH E V+  ++   + E +IKPV+P ++L + T + +NP+GRF
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGVD---RADPLEQGAGDQGIMFGYATNETDVLMPAPITYAHRLMEQQAKVRKSGKLDWLRPDAKSQLTFAYENNK----IVGIDAVVLSTQHAEHVSQKDLVEGVMEEIIKPVLPSEWLSQNTKYFINPTGRF 231          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_DEIDV (S-adenosylmethionine synthetase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=metK PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.860e-56
Identity = 123/247 (49.80%), Postives = 156/247 (63.16%), Query Frame = 2
Query:  104 FTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITT-KAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR---------PED----IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            +TSESV+EGHPDKL D ISD++LD  L Q+P S+VA ET   T M +V GE+    A VD +K VRD    +G+   + G DA++  VLV+I +QSP+IA+GV      R         PE+    +GAGDQG MFGYATDETPE MPL   LA +L  RL E+RKN T  +LRPD K QVTV    D        V T++ISTQH E VT ++I  D+ +HVI+ VIP +YL   T + +NPSGRF
Sbjct:    5 YTSESVSEGHPDKLADFISDSILDEFLRQEPTSRVAVETLVTTGMAVVAGEVRAITAHVDVQKTVRDAVMKVGYTRANYGFDAEYSAVLVSIHEQSPEIAEGVDHSEEWRGMSEAERALPENAYSLVGAGDQGLMFGYATDETPELMPLPISLAHQLTRRLAELRKNGTLPYLRPDAKAQVTVVRDGDVHDASETLVDTIVISTQHGEDVTQEQIRQDMLKHVIQAVIPAEYLTPDTKYFINPSGRF 251          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ACIF5 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metK PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.860e-56
Identity = 114/237 (48.10%), Postives = 154/237 (64.98%), Query Frame = 2
Query:   92 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            ++ LFTSESV+EGHPDK+ DQISDA+LDA L QDP  +VA ET   T ++++ GEITT A VDY  + R T R IG+ S D+G D   C V+  +++QSPDIAQGV         D GAGDQG MFG+A DET   MP     A +L  R   VRK+    WLRPD K+QVTV Y +D     PV + TV++STQH   +++ ++   ++E +IKPV+P + + + T + +NP+GRF
Sbjct:    3 KSHLFTSESVSEGHPDKVADQISDAILDAILAQDPRGRVAAETLITTGLIVLAGEITTTAVVDYADVARQTVRRIGYNSSDMGFDWASCAVVQTLDKQSPDIAQGV-DEGAGLDLDQGAGDQGLMFGFACDETDVLMPTPIYFAHRLTERQAMVRKDGRLPWLRPDAKSQVTVRYEDDR----PVAIDTVVLSTQHAPDISHADLVEAVREEIIKPVLPPEMIHKDTKYLINPTGRF 234          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ACIF2 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metK PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.860e-56
Identity = 114/237 (48.10%), Postives = 154/237 (64.98%), Query Frame = 2
Query:   92 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            ++ LFTSESV+EGHPDK+ DQISDA+LDA L QDP  +VA ET   T ++++ GEITT A VDY  + R T R IG+ S D+G D   C V+  +++QSPDIAQGV         D GAGDQG MFG+A DET   MP     A +L  R   VRK+    WLRPD K+QVTV Y +D     PV + TV++STQH   +++ ++   ++E +IKPV+P + + + T + +NP+GRF
Sbjct:    3 KSHLFTSESVSEGHPDKVADQISDAILDAILAQDPRGRVAAETLITTGLIVLAGEITTTAVVDYADVARQTVRRIGYNSSDMGFDWASCAVVQTLDKQSPDIAQGV-DEGAGLDLDQGAGDQGLMFGFACDETDVLMPTPIYFAHRLTERQAMVRKDGRLPWLRPDAKSQVTVRYEDDR----PVAIDTVVLSTQHAPDISHADLVEAVREEIIKPVLPPEMIHKDTKYLINPTGRF 234          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_RALEH (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metK PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.347e-56
Identity = 122/238 (51.26%), Postives = 156/238 (65.55%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            FLFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VA ET   T +V++ GEITT A VDY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV     +  +D    GAGDQG MFGYA DETPE MP     A +L  R + +R++    WLRPD K+QVTV Y +      P  V TV++STQH   +T  +I   + E +IKPV+P + L E T + +NP+GRF
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAVLDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGV----DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYAHRLVERQSLLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSVDTVVLSTQHSPDITQAQIREAVIEEIIKPVLPAEMLKE-TKYLVNPTGRF 233          
The following BLAST results are available for this feature:
BLAST of CB290722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_POLNS3.721e-5648.51S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_MARAV3.721e-5650.00S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_ANAVT3.721e-5648.81S-adenosylmethionine synthetase OS=Anabaena variab... [more]
METK_ACTPJ3.721e-5649.57S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP73.721e-5649.57S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP23.721e-5649.57S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_DEIDV4.860e-5649.80S-adenosylmethionine synthetase OS=Deinococcus des... [more]
METK_ACIF54.860e-5648.10S-adenosylmethionine synthetase OS=Acidithiobacill... [more]
METK_ACIF24.860e-5648.10S-adenosylmethionine synthetase OS=Acidithiobacill... [more]
METK_RALEH6.347e-5651.26S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290722 ID=CB290722; Name=CB290722; organism=Citrus sinensis; type=EST; length=804bp
GCACTAGGTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCTTAG
ATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTT
CTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGA
CCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGA
GCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTT
GGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGA
CACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCG
ATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCC
CAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGG
TGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTA
TGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAG
GTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCA
GGTCACTGTTGAGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTG
TCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGAT
GAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGA
GAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTT
TTGT
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