CB290722

Overview
NameCB290722
Unique NameCB290722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:160..963. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 6.433e-125
Identity = 211/238 (88.66%), Postives = 227/238 (95.38%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            ME+FLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACETCTKTNMVMVFGEITTKAKV+YEKIVRDTCR IGF S DVGLDADHCKVLVNIEQQSPDIAQGVHGH +K+PE+IGAGDQGHMFGYATDETPE MPL+HVLATKLGA+LTEVRKN+TC WLRPDGKTQVTVEY N+ GAMVPVRVHTVLISTQHDETVTN++IA DLKEHVIKPVIP +Y+D+ TIFHLNPSGRF
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFTSPDVGLDADHCKVLVNIEQQSPDIAQGVHGHLSKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNNTCPWLRPDGKTQVTVEYRNEGGAMVPVRVHTVLISTQHDETVTNEQIAKDLKEHVIKPVIPAQYMDDDTIFHLNPSGRF 238          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 446.047 bits (1146), Expect = 1.097e-124
Identity = 215/237 (90.72%), Postives = 225/237 (94.94%), Query Frame = 2
Query:   92 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            ETFLFTSESVNEGHPDKLCDQ+SDAVLDACL QD +SKVACET TKTNMVMV GEITTKA VDYEKIVRDTCR+IGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPE++GAGDQG MFGYATDETPE MPLSHVLATKLGARLTEVRKN TC+W+RPDGKTQVTVEY N++GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP KYLDE TIFHLNPSGRF
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDADSKVACETVTKTNMVMVLGEITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWVRPDGKTQVTVEYLNEDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPAKYLDENTIFHLNPSGRF 240          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 445.662 bits (1145), Expect = 1.433e-124
Identity = 211/238 (88.66%), Postives = 226/238 (94.96%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACETCTKTNMVMVFGEITTKA V+YEKIVRDTCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDETPE MPL+HVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEY N+ GAMVP+RVHTVLISTQHDETVTN++IA DLKEHVIKPVIP +YLD++TIFHLNPSGRF
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKATVNYEKIVRDTCRGIGFTSPDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNEQIAQDLKEHVIKPVIPAQYLDDQTIFHLNPSGRF 238          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 445.277 bits (1144), Expect = 1.872e-124
Identity = 209/238 (87.82%), Postives = 227/238 (95.38%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M+TFLFTSESVNEGHPDKLCDQ+SDA+LDACL+QDPESKVACE+CTKTNMVMVFGEITTKA+V+YEKIVRDTCR IGF S DVGLDADHCKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDETPE MPL+HVLATKLGA+LTEVRKNSTC WLRPDGKTQVTVEY N+ GAMVP+RVHTVLISTQHDETVTND+IA DLK+HVIKPV+P +YLD+ TIFHLNPSGRF
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLKQDPESKVACESCTKTNMVMVFGEITTKAQVNYEKIVRDTCRGIGFTSPDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNSTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIANDLKKHVIKPVVPAQYLDDNTIFHLNPSGRF 238          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 443.351 bits (1139), Expect = 7.112e-124
Identity = 209/238 (87.82%), Postives = 225/238 (94.54%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M+TFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDPESKVACETC+KTNMVMVFGEITTKA VDYEKIVRDTCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDETPE MPL+HVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEY N+ GAMVP+RVHT+LISTQHDE VTN++IAADLKEHVIKPVIP +YLD+KTIFHLNPSGRF
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLAQDPESKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNEGGAMVPIRVHTILISTQHDENVTNEQIAADLKEHVIKPVIPVQYLDDKTIFHLNPSGRF 238          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 401.749 bits (1031), Expect = 2.373e-111
Identity = 192/211 (91.00%), Postives = 202/211 (95.73%), Query Frame = 2
Query:  170 LDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            +DACLEQD +SKVACETCTKTN+VMVFGEITTKA VDYEKIVR+TCR+IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGHFTK+PE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC+WLRPDG TQVTVEYYND GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD KTI HLNPSGRF
Sbjct:    3 VDACLEQDSDSKVACETCTKTNLVMVFGEITTKANVDYEKIVRNTCRNIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGNTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDSKTICHLNPSGRF 213          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 2.009e-110
Identity = 188/205 (91.71%), Postives = 199/205 (97.07%), Query Frame = 2
Query:  188 QDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            QDP+SKVACETCTKTNMVMVFGEITTK  +DYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRK+ TC WLRPDGKTQVT+EYYN+NGAMVP+RVHTVLISTQHDETVTND+IAADLKEHVI+PVIPEKYLDEKTIFHLNPSGRF
Sbjct:    1 QDPDSKVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTIEYYNENGAMVPIRVHTVLISTQHDETVTNDKIAADLKEHVIRPVIPEKYLDEKTIFHLNPSGRF 205          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 2.624e-110
Identity = 188/238 (78.99%), Postives = 210/238 (88.24%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            +E+FL+TSESVNEGHPDK+CDQ+SDAVLDACLEQDP+SKVACETC KT MVMVFGEITTKAKVDYE IVR  C+ IGF S+DVGLDAD CKVLV+IE+QSPDI QGVHG  TK  E+IGAGDQGHMFGYATDETPE MPL+HVLAT+LG +LTEVRKN  C WLRPDGKTQVTVEY  + GAM+P RVHT+LISTQH+  VTN++I  DL EHVIKPV+P KYLD+KTIFHLNPSGRF
Sbjct:    4 LESFLYTSESVNEGHPDKICDQVSDAVLDACLEQDPDSKVACETCCKTGMVMVFGEITTKAKVDYEAIVRKVCKEIGFTSEDVGLDADKCKVLVHIEEQSPDIGQGVHGMGTKALEEIGAGDQGHMFGYATDETPELMPLTHVLATQLGYKLTEVRKNGVCPWLRPDGKTQVTVEYKREGGAMIPQRVHTILISTQHNPDVTNEKIREDLMEHVIKPVVPAKYLDDKTIFHLNPSGRF 241          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 8.175e-104
Identity = 180/235 (76.60%), Postives = 198/235 (84.26%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            FLFTSESVNEGHPDKL DQISD +LDACL QDP+SKVACET TKTNMVMVFGEITTKAKVDYE +VR  CR +GF+SD+ GLD + C+VLV +  QSPDI QGVHG  TK  EDIGAGDQGHMFGYATDETPE MPL+HVLATKLG RLT VRK+ TC W+ PDGKTQVT+EY N+ GAMVP RVHT+LISTQH E VTN++IA DL   VIK V+PEKYLD  TIFHLNPSGRF
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLAQDPDSKVACETATKTNMVMVFGEITTKAKVDYEAVVRQVCRDVGFISDETGLDGNKCRVLVELHDQSPDIGQGVHGMGTKSDEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKDGTCPWVLPDGKTQVTIEYENEGGAMVPKRVHTILISTQHIEGVTNEKIAEDLMNEVIKKVVPEKYLDADTIFHLNPSGRF 237          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 6.921e-103
Identity = 177/235 (75.32%), Postives = 200/235 (85.11%), Query Frame = 2
Query:   98 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            FLFTSESVNEGHPDKL DQISD +LDACLEQDP+SKVACET TKTNMVMVFGEITTKAKVDYE +VR  CR +GF+S++ GLD ++C+VLV +  QSPDI QGVHG  TK  E+IGAGDQGHMFGYATDETPE MPL+HVLATKLG RLT VRK+ TC W+ PDGKTQVT+EY N+ GAM+P RVHT+LISTQH E V+N++IA DL   VIK V+PEKYLD  TIFHLNPSGRF
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLEQDPDSKVACETATKTNMVMVFGEITTKAKVDYEAVVRQVCRDVGFISNETGLDGNNCRVLVELHDQSPDIGQGVHGMGTKSLEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKDGTCPWVLPDGKTQVTIEYENEGGAMIPKRVHTILISTQHIEGVSNEKIAEDLMNEVIKKVVPEKYLDADTIFHLNPSGRF 237          
The following BLAST results are available for this feature:
BLAST of CB290722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_ACTCH6.433e-12588.66S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK3_HORVU1.097e-12490.72S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK3_CATRO1.433e-12488.66S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK1_ACTCH1.872e-12487.82S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK4_POPTR7.112e-12487.82S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK1_PEA2.373e-11191.00S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK3_ACTCH2.009e-11091.71S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]
METK_CHLRE2.624e-11078.99S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTLU8.175e-10476.60S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]
METK_OSTTA6.921e-10375.32S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290722 ID=CB290722; Name=CB290722; organism=Citrus sinensis; type=EST; length=804bp
GCACTAGGTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCTTAG
ATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTT
CTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGA
CCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGA
GCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTT
GGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGA
CACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCG
ATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCC
CAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGG
TGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTA
TGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAG
GTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCA
GGTCACTGTTGAGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTG
TCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGAT
GAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGA
GAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTT
TTGT
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