CB290722

Overview
NameCB290722
Unique NameCB290722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 6.719e-90
Identity = 161/238 (67.65%), Postives = 188/238 (78.99%), Query Frame = 2
Query:   89 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            M ++LFTSESV EGHPDK+CDQ+SDAVLDACL QDP SKVACET TKT MVM+ GEITTKA VDY+K+VR+  + IG+     G D   C VLV IEQQSPDIAQGVH      PEDIGAGDQGHMFGYAT+ETP  MPL+H LA++L  +LTE+R N T +W RPD KTQVTVEY  +   + PVRVHT++ISTQHDE VTN++I ADLKE VIK V+P +YLD+ TI+HLNPSGRF
Sbjct:    1 MSSYLFTSESVTEGHPDKICDQVSDAVLDACLAQDPLSKVACETATKTGMVMILGEITTKANVDYQKVVREAVKKIGYDDSSKGFDYKTCNVLVAIEQQSPDIAQGVHIGKVN-PEDIGAGDQGHMFGYATNETPTLMPLTHFLASELVNKLTELRHNGTLAWARPDAKTQVTVEYKKEGHKITPVRVHTIVISTQHDEKVTNEQIRADLKELVIKAVVPAQYLDDNTIYHLNPSGRF 237          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.553e-89
Identity = 157/237 (66.24%), Postives = 187/237 (78.90%), Query Frame = 2
Query:   92 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            +T LFTSE V+E HPDKLCDQ+SDA+LDACL  DP SKVACET +KT MVMVFGEITTK+  DY+K++R+T + IGF    +G D   C +LV IEQQSPDIAQGVH    +  +D+GAGDQGHMFG+AT+ETPEFMP++HVLAT+L  R+TEVR NS  SW+RPD KTQVTVEY N+NG ++P+R HTV+IS QH E VTN+EI   L E VIKP IP   LD +TIFHLNPSGRF
Sbjct:    5 KTLLFTSECVSESHPDKLCDQVSDAILDACLANDPYSKVACETASKTGMVMVFGEITTKSSFDYQKVIRETVKRIGFTDSSIGFDYKTCNILVAIEQQSPDIAQGVH--VGRSDDDLGAGDQGHMFGHATNETPEFMPMTHVLATRLCQRMTEVRNNSILSWMRPDAKTQVTVEYRNENGTLIPLRRHTVVISVQHSEDVTNEEIRKRLMEEVIKPSIPAHLLDGETIFHLNPSGRF 239          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.450e-84
Identity = 154/236 (65.25%), Postives = 183/236 (77.54%), Query Frame = 2
Query:   95 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A VDY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGVH    +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N T  WLRPD KTQVTV+Y  D GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+HL PSGRF
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRF 250          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.450e-84
Identity = 154/236 (65.25%), Postives = 183/236 (77.54%), Query Frame = 2
Query:   95 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A VDY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGVH    +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N T  WLRPD KTQVTV+Y  D GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+HL PSGRF
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRF 250          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.450e-84
Identity = 154/236 (65.25%), Postives = 183/236 (77.54%), Query Frame = 2
Query:   95 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A VDY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGVH    +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N T  WLRPD KTQVTV+Y  D GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+HL PSGRF
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRF 250          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 312.383 bits (799), Expect = 1.894e-84
Identity = 153/236 (64.83%), Postives = 183/236 (77.54%), Query Frame = 2
Query:   95 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A +DY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGVH    +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N T  WLRPD KTQVTV+Y  D GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+HL PSGRF
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRF 250          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.509e-84
Identity = 151/236 (63.98%), Postives = 183/236 (77.54%), Query Frame = 2
Query:   95 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            TFLFTSESV EGHPDK+CDQI+DAVLDA L+QDP++KVACET  KT M+++ GEIT++A +DY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGVH    +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N T  WLRPD KTQVTV+Y  D GA++P+RVHT++IS QHDE V  DE+   LKE +IK V+P KYLDE TI+HL PSGRF
Sbjct:   17 TFLFTSESVGEGHPDKICDQINDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVIPIRVHTIVISVQHDEEVCLDEMRDALKEKLIKAVVPAKYLDEDTIYHLQPSGRF 250          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.796e-82
Identity = 139/237 (58.65%), Postives = 189/237 (79.75%), Query Frame = 2
Query:   92 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            +TFLFTSESV EGHPDK+CDQISDA+LDACL+ DP SKVACET +KT MVMVFGEITT++++DY+K++R+T +SIG+   + G D   C VLV IEQQSPDIAQG+  H+ K  E++GAGDQG MFGYATDETPE +PL+ +LA KL A ++  R++ +  WLRPD KTQVT+EY  +NGA++P RV T+++S QH ++++ +++ +++ E +IKP +P   LDEKT++H+ PSGRF
Sbjct:    3 QTFLFTSESVGEGHPDKICDQISDAILDACLKDDPFSKVACETASKTGMVMVFGEITTRSQIDYQKVIRNTIKSIGYDDSEKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPEKLPLTILLAHKLNAAMSVARRDGSLPWLRPDTKTQVTIEYEEENGAVIPRRVDTIVVSAQHADSISTEDLRSEILEKIIKPTVPAHLLDEKTVYHIQPSGRF 237          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2)

HSP 1 Score: 302.368 bits (773), Expect = 1.959e-81
Identity = 148/245 (60.41%), Postives = 182/245 (74.29%), Query Frame = 2
Query:   68 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A +DY+++VRDT + IG+     G D   C VLV +EQQSPDIAQ VH    +  ED+GAGDQG MFGYATDET E MPL+ VLA KL  R+ ++R++    WLRPD KTQVTV+Y  DNGA++PVRVHT++IS QH+E +T + +   LKE VIK V+P KYLDE TI+HL PSGRF
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMIDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVH--LDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRMADLRRSGVLPWLRPDSKTQVTVQYVQDNGAVIPVRVHTIVISVQHNEDITLEAMREALKEQVIKAVVPAKYLDEDTIYHLQPSGRF 251          
BLAST of CB290722 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.342e-81
Identity = 147/245 (60.00%), Postives = 182/245 (74.29%), Query Frame = 2
Query:   68 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 802
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VRDT + IG+     G D   C VLV +EQQSPDIAQ VH    +  ED+GAGDQG MFGYATDET E MPL+ VLA KL  R+ ++R++    WLRPD KTQVTV+Y  DNGA++PVR+HT++IS QH+E +T + +   LKE VIK V+P KYLDE T++HL PSGRF
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSVAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVH--LDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRIADLRRSGVLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEAMQEALKEQVIKAVVPAKYLDEDTVYHLQPSGRF 251          
The following BLAST results are available for this feature:
BLAST of CB290722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DICDI6.719e-9067.65S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_ACACA2.553e-8966.24S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK2_PONAB1.450e-8465.25S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA1.450e-8465.25S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN1.450e-8465.25S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE1.894e-8464.83S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_RAT5.509e-8463.98S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_SCHPO8.796e-8258.65S-adenosylmethionine synthetase OS=Schizosaccharom... [more]
METK1_RAT1.959e-8160.41S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_MOUSE3.342e-8160.00S-adenosylmethionine synthetase isoform type-1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290722 ID=CB290722; Name=CB290722; organism=Citrus sinensis; type=EST; length=804bp
GCACTAGGTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCTTAG
ATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTT
CTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGA
CCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGA
GCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTT
GGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGA
CACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCG
ATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCC
CAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGG
TGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTA
TGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAG
GTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCA
GGTCACTGTTGAGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTG
TCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGAT
GAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGA
GAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTT
TTGT
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