CB290724

Overview
NameCB290724
Unique NameCB290724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.083e-64
Identity = 129/257 (50.19%), Postives = 173/257 (67.32%), Query Frame = 3
Query:   36 MGLFRSPTMAMFLLFLFTVS--SALDMSIVSYDKTHESKSSSWRT----DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD-TYRKNAKVVTIDDY 785
            MG  +S  M +FLL L   S  +A+DMS+VS +  H   +   R     D E   MFE+W VKHGK Y+++ EKE+R  IF+DNLRFI   N+EN +Y++GLNRFADL+  EY  +  GA     R  +    S+RY    G+ LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG ++ A+EFI++NGG+ T+ DYPYKA++G C+   +++ K V ID Y
Sbjct:    1 MGYAKS-AMLIFLLALVIASCATAMDMSVVSSNDNHHVTAGPGRRQGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNVMIDGY 255          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.038e-63
Identity = 123/252 (48.81%), Postives = 170/252 (67.46%), Query Frame = 3
Query:   36 MGLFRSPTMAMFL-LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD-TYRKNAKVVTIDDY 785
            MG  +S  + + + + + + ++A+DMS+VSYD  +   S     D E   +FE+W VKHGK Y ++ EKE+R  IF+DNLRFI+  N+EN +Y++GL  FADL+  EY+ +  GA     R  +    SDRY     + LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG ++ A+EFI+ NGG+ T+ DYPYKA++G CD   ++N K V ID Y
Sbjct:    1 MGSAKSAMLILLVAMVIASCATAIDMSVVSYDDNNRLHSVF---DAEASLIFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCDGRLKENNKNVMIDGY 248          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.831e-60
Identity = 132/260 (50.77%), Postives = 167/260 (64.23%), Query Frame = 3
Query:   60 MAMFLLFL--FTVSSALD----MSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKH------GKAYNALGEKEKRFEIFKDNLRFIDEHNS---ENRTYKVGLNRFADLTNEEYRSMYLGAR-FGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAV-AEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 785
            MA FLL L  F   +A      MSI+ Y+  H  +    RT+ E    ++ W  +H      G     +GE E+RF +F DNL+F+D HN+   E   +++G+NRFADLTN E+R+ YLG    G  R   ++ R D       EALPDSVDWR KGAV A VK+QG CGSCWAFS +AAVEGINKIVTG L+SLSEQELV+C     N GCNGG+MD AF FI  NGG+DTEEDYPY A+DG C+  +++ KVV+ID +
Sbjct:   15 MACFLLILAAFAPPAAAAPPDIMSIIRYNAEHGVRGLE-RTEAEARAAYDLWLARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAGRGRRVGEAYRHDGV-----EALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGF 268          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.960e-60
Identity = 117/236 (49.58%), Postives = 154/236 (65.25%), Query Frame = 3
Query:   81 LFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSD-RYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 785
            L  +S AL ++I      HE +  S   ++ + G++E W   H     +L EK+KRF +FK N   +   N  ++ YK+ LN+FAD+TN E+R+ Y G++    R      R +  ++    + +P SVDWRKKGAV  VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCDT  N+GCNGGLMDYAFEFI   GGI TE +YPY+A DG+CD  ++NA  V+ID +
Sbjct:    6 LLALSLALVLAITESFDFHEKELES---EESLWGLYERWR-SHHTVSRSLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGH 237          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.475e-57
Identity = 115/237 (48.52%), Postives = 154/237 (64.98%), Query Frame = 3
Query:   84 FTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTS--LKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 785
            F   + + +S +S  ++         ++D +  ++E W   H  A + L EK +RF +FK+N++FI E N + +  YK+ LN+F D+TN+E+RS Y G++    R+   ++          VG     S+DWR KGAV  VKDQG CGSCWAFSTIA+VEGIN+I TG L+SLSEQELVDCDTSYNEGCNGGLMDYAFEFI  N GI TE+ YPY   DG+C +   N+ VV+ID +
Sbjct:    6 FIALALVALSFLSIAQSIPFTEKDLASEDSLWNLYEKWRTHHTVARD-LDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDYAFEFIQKN-GITTEDSYPYAEQDGTCASNLLNSPVVSIDGH 240          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.668e-56
Identity = 114/243 (46.91%), Postives = 153/243 (62.96%), Query Frame = 3
Query:   60 MAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR-SDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 785
            MAM  L    +S +L + + +    HE    S   ++ +  ++E W   H     +LGEK KRF +FK N+  +   N  ++ YK+ LN+FAD+TN E+RS Y G++    +    S+  S  ++     ++P SVDWRKKGAV +VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCD   N+GCNGGLM+ AFEFI   GGI TE +YPY A +G+CD  + N   V+ID +
Sbjct:    1 MAMKKLLWVVLSLSLVLGVANSFDFHEKDLES---EESLWDLYERWR-SHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTCDESKVNDLAVSIDGH 239          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.040e-55
Identity = 111/241 (46.06%), Postives = 152/241 (63.07%), Query Frame = 3
Query:   66 MFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSD-RYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 785
            ++++  F++   +  S   +DK   S+ S W        ++E W   H     +LGEK KRF +FK NL  +   N  ++ YK+ LN+FAD+TN E+RS Y G++    R    +   +  ++     ++P SVDWRKKGAV +VKDQG CGSCWAFST+ AVEGIN+I T  L++LSEQELVDCD   N+GCNGGLM+ AFEFI   GGI TE +YPYKA +G+CD  + N   V+ID +
Sbjct:    7 LWVVLSFSLVLGVANSFDFHDKDLASEESLW-------DLYERWR-SHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDASKVNDLAVSIDGH 239          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.774e-55
Identity = 116/233 (49.79%), Postives = 159/233 (68.24%), Query Frame = 3
Query:  102 LDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVA-EVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAID-GSCDTYR-KNAKVVTIDDY 785
            L + ++S      + + S R + EV+ M+E W V++GK YN LGEKE+RF+IFKDNL+ I+EHNS+ NR+Y+ GLN+F+DLT +E+++ YLG +   K  S     ++RY  + G+ LPD VDWR++GAV   VK QG CGSCWAF+   AVEGIN+I TG L+SLSEQEL+DCD  + N GC GG   +AFEFI +NGGI ++E Y Y   D  +C     K  +VVTI+ +
Sbjct:   13 LSVLLISISLGVVTATESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLS---DVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGEDTAACKAIEMKTTRVVTINGH 242          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.741e-55
Identity = 97/128 (75.78%), Postives = 111/128 (86.72%), Query Frame = 3
Query:  402 LKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 785
            L   +SDRYLP+VG++LP+S+DWR+KG +  VKDQGSCGSCWAFS +AA+E IN IVTG+LISLSEQELVDCD SYNEGC+GGLMDYAFEF+I NGGIDTEEDYPYK  +G CD YRKNAKVV ID Y
Sbjct:    2 LSKNKSDRYLPKVGDSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSY 129          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.999e-50
Identity = 103/232 (44.40%), Postives = 141/232 (60.78%), Query Frame = 3
Query:   75 LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVV 770
            LF+    S  D SIV Y +   + +      + ++ +F +W + H K Y  + EK  RFEIFKDNL +IDE N +N +Y +GLN FADL+N+E+   Y+G+   A   +++    + ++      LP++VDWRKKGAV  V+ QGSCGSCWAFS +A VEGINKI TG L+ LSEQELVDC+   + GC GG   YA E++  N GI     YPYKA  G+C   +    +V
Sbjct:   17 LFVHMSVSFGDFSIVGYSQDDLTST------ERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDA---TIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR-SHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIV 237          
The following BLAST results are available for this feature:
BLAST of CB290724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CPR4_ARATH6.083e-6450.19Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPR3_ARATH1.038e-6348.81Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CYSP1_ORYSJ1.831e-6050.77Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSEP_RICCO6.960e-6049.58Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSP_HEMSP2.475e-5748.52Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CYSEP_VIGMU4.668e-5646.91Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSEP_PHAVU1.040e-5546.06Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CPR2_ARATH1.774e-5549.79Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CYSPL_SOLLC6.741e-5575.78Low-temperature-induced cysteine proteinase (Fragm... [more]
PAPA3_CARPA4.999e-5044.40Caricain OS=Carica papaya PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290724 ID=CB290724; Name=CB290724; organism=Citrus sinensis; type=EST; length=787bp
GCACTAGGGAAAAAAAAAAGCTCTTTTCTCCAAAGATGGGTTTGTTCAGA
TCACCAACCATGGCCATGTTTTTACTTTTTCTCTTCACTGTATCATCTGC
CTTGGACATGTCGATTGTATCTTATGATAAAACCCATGAGTCAAAATCTA
GCAGCTGGAGGACCGACGATGAGGTTATGGGTATGTTCGAGGCCTGGTTT
GTGAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTT
TGAGATCTTTAAGGACAATCTTAGGTTTATTGATGAACATAACTCAGAGA
ACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGACCAACGAG
GAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTC
CTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGT
TGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAA
GATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGT
AGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGC
AGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGT
TTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACAC
AGAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATC
GGAAAAATGCCAAAGTAGTTACCATTGATGACTATGA
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