CB290724

Overview
NameCB290724
Unique NameCB290724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:37..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 2.743e-48
Identity = 98/207 (47.34%), Postives = 138/207 (66.67%), Query Frame = 3
Query:  168 DEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKR-TSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 785
            + ++ +F++W +KH K Y ++ EK  RFEIF+DNL +IDE N +N +Y +GLN FADL+N+E++  Y+G  F A+  T L+   ++ +  +     P S+DWR KGAV  VK+QG+CGSCWAFSTIA VEGINKIVTG+L+ LSEQELVDCD  ++ GC GG    + +++ +N G+ T + YPY+A    C    K    V I  Y
Sbjct:   42 ERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVG--FVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCD-KHSYGCKGGYQTTSLQYVANN-GVHTSKVYPYQAKQYKCRATDKPGPKVKITGY 244          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.679e-48
Identity = 108/250 (43.20%), Postives = 146/250 (58.40%), Query Frame = 3
Query:   36 MGLFRSPTMAMFLLFLFTVSSALDM--SIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR--KNAKVV 770
            MGL     +   ++      +A+++  +I   DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+ ++G       +   S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY+A  G+C+  R  +N+ VV
Sbjct:    1 MGLLSKKLLVASMVAAVLAVAAVELCSAIPMEDKDLESEEALW-------DLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVV 242          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.111e-48
Identity = 108/250 (43.20%), Postives = 145/250 (58.00%), Query Frame = 3
Query:   36 MGLFRSPTMAMFLLFLFTVSSALDM--SIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR--KNAKVV 770
            MGL     +   ++      +A+++  +I   DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+ ++G           S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY+A  G+C+  R  +N+ VV
Sbjct:    1 MGLLSKKLLVASMVAAVLAVAAVELCSAIPMEDKDLESEEALW-------DLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVV 242          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 8.259e-45
Identity = 93/200 (46.50%), Postives = 124/200 (62.00%), Query Frame = 3
Query:  186 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 785
            F  W + H K+Y +  E   R+ IFK N+ ++ + NS+     +GLN FAD+TNEEYR+ YLG +F A  +SL   + ++       A   S DWR +GAV  VK+QG CG CW+FST  + EG +    G L+SLSEQ L+DC T  N GC+GGLM YAFE+II+N GIDTE  YPYKA +G C+ Y+      T+  Y
Sbjct:   30 FTDWMITHQKSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDA--SSLIGTQEEKVFTTSSAA---SKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE-NSGCDGGLMTYAFEYIINNNGIDTESSYPYKAENGKCE-YKSENSGATLSSY 221          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.992e-44
Identity = 98/235 (41.70%), Postives = 138/235 (58.72%), Query Frame = 3
Query:   75 LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTID 779
            LF++   S  D SIV Y +   + +      + ++ +FE+W +KH K Y  + EK  RFEIFKDNL++IDE N +N +Y +GLN FAD++N+E++  Y G+  G   T+  S   +  L      +P+ VDWR+KGAV  VK+QGSCGSCWAFS +  +EGI KI TG+L   SEQEL+DCD   + GCNGG    A + ++   GI     YPY+ +   C +  K       D
Sbjct:   17 LFVYMGLSFGDFSIVGYSQNDLTST------ERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSY--EEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR-SYGCNGGYPWSALQ-LVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTD 241          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.193e-43
Identity = 97/227 (42.73%), Postives = 136/227 (59.91%), Query Frame = 3
Query:   72 LLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMYLGARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 743
            L+FLF    A+  S         S +S    +D +M  FE W  ++G+ Y    EK +RF+IFK+N++ I+  NS N  +Y +G+N+F D+T  E+ + Y G       +R  + S            A+P S+DWR  GAV EVK+Q  CGSCW+F+ IA VEGI KI TG L+SLSEQE++DC  SY  GC GG ++ A++FII N G+ TEE+YPY A  G+C+
Sbjct:    7 LVFLFLFLCAMWAS--------PSAASRDEPNDPMMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNI-----SAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY--GCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCN 218          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.657e-43
Identity = 88/199 (44.22%), Postives = 124/199 (62.31%), Query Frame = 3
Query:  186 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTID 779
            F  + V++GK+Y +  E  KRF IF ++L+ +   N +  +Y++G+NRFAD++ EE+R+  LGA      T   + R    +     ALP++ DWR+ G V+ VK+QG CGSCW FST  A+E      TG  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTEE YPY+ ++G C    +N  V  +D
Sbjct:   59 FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHR----MRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLD 253          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 3.470e-43
Identity = 94/215 (43.72%), Postives = 127/215 (59.07%), Query Frame = 3
Query:   96 SALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 740
            S  D SIV Y +   + +      + ++ +F +W +KH K Y  + EK  RFEIFKDNL++IDE N     Y +GLN F+DL+N+E++  Y+G+              + ++      LP+SVDWR KGAV  VK QG C SCWAFST+A VEGINKI TG+L+ LSEQELVDCD   + GCN G    + +++  N GI     YPY A   +C
Sbjct:   24 SYCDFSIVGYSQDDLTST------ERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGS---LPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCD-KQSYGCNRGYQSTSLQYVAQN-GIHLRAKYPYIAKQQTC 227          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.470e-43
Identity = 94/198 (47.47%), Postives = 119/198 (60.10%), Query Frame = 3
Query:  186 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKN 758
            ++ W   H K Y    E+E R  I++ NL+FI  HN E      TY+VG+N   D+TNEE     +  R GA R S +S ++  +       LPD+VDWR+KG V EVK QGSCG+CWAFS + A+EG  K+ TG LISLS Q LVDC       N+GC GG M  AF++IIDNGGI+ +  YPYKA D  C    KN
Sbjct:   36 WDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEE-----ISCRMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYNSKN 228          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.319e-42
Identity = 88/199 (44.22%), Postives = 120/199 (60.30%), Query Frame = 3
Query:  186 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTID 779
            F  + V+HGK Y    E ++RF IF ++L  +   N     Y++G+NRFAD++ EE+++  LGA      T   + R      R   ALP++ DWR+ G V+ VKDQG CGSCW FST  ++E      TG  +SLSEQ+LVDC T+YN  GC+GGL   AFE+I  NGG+DTEE YPY  ++G C    +N  V  +D
Sbjct:   62 FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRM-----RDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLD 255          
The following BLAST results are available for this feature:
BLAST of CB290724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
PAPA2_CARPA2.743e-4847.34Chymopapain OS=Carica papaya PE=1 SV=2[more]
CYSP2_HORVU4.679e-4843.20Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU6.111e-4843.20Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CYSP5_DICDI8.259e-4546.50Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
PAPA1_CARPA6.992e-4441.70Papain OS=Carica papaya PE=1 SV=1[more]
BROM1_ANACO1.193e-4342.73Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP2_MAIZE2.657e-4344.22Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
PAPA4_CARPA3.470e-4343.72Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CATS_MOUSE3.470e-4347.47Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
ORYC_ORYSJ1.319e-4244.22Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290724 ID=CB290724; Name=CB290724; organism=Citrus sinensis; type=EST; length=787bp
GCACTAGGGAAAAAAAAAAGCTCTTTTCTCCAAAGATGGGTTTGTTCAGA
TCACCAACCATGGCCATGTTTTTACTTTTTCTCTTCACTGTATCATCTGC
CTTGGACATGTCGATTGTATCTTATGATAAAACCCATGAGTCAAAATCTA
GCAGCTGGAGGACCGACGATGAGGTTATGGGTATGTTCGAGGCCTGGTTT
GTGAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTT
TGAGATCTTTAAGGACAATCTTAGGTTTATTGATGAACATAACTCAGAGA
ACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGACCAACGAG
GAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTC
CTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGT
TGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAA
GATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGT
AGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGC
AGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGT
TTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACAC
AGAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATC
GGAAAAATGCCAAAGTAGTTACCATTGATGACTATGA
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