CB290724

Overview
NameCB290724
Unique NameCB290724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:37..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 5.540e-41
Identity = 86/203 (42.36%), Postives = 124/203 (61.08%), Query Frame = 3
Query:  141 SKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN-RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDT 746
            S +S     D +M  FE W  ++G+ Y    EK  RF+IFK+N+  I+  N+ N  +Y +G+N+F D+TN E+ + Y G        ++K +    +      ++P S+DWR  GAV  VK+QG CGSCWAF++IA VE I KI  G+L+SLSEQ+++DC  SY  GC GG ++ A+ FII N G+ +   YPYKA  G+C T
Sbjct:   22 SAASCDEPSDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPL---NIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY--GCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTCKT 219          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 89/203 (43.84%), Postives = 119/203 (58.62%), Query Frame = 3
Query:  195 WFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 785
            W   +GK Y    E+  R  I++ NL+F+  HN E+     +Y +G+N   D+T+EE  S+       + R   + +R+  Y       LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC T    N+GCNGG M  AF++IIDN GID++  YPYKA+D  C  Y    +  T   Y
Sbjct:   31 WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL-----MSSLRVPSQWQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQ-YDSKYRAATCSKY 227          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.612e-40
Identity = 98/252 (38.89%), Postives = 146/252 (57.94%), Query Frame = 3
Query:   60 MAMFLLFLFTVSSALDMSIVSYDKTHES----KSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRT---YKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEAL---PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 785
            M   +L LF   S L +S  S   TH S      + + T  +V  +F+ W  +HG+ Y+   E+ KR EIFK+N  +I + N+  ++   +++GLN+FAD+T +E+   YL A    K  S + K +++ + +   +    P S DWRKKG + +VK QG CG  WAFS   A+E  + I TG L+SLSEQELVDC    +EG   G    +FE+++++GGI T++DYPY+A +G C   +   K VTID Y
Sbjct:    1 MGFLVLLLF---SLLGLSSSSSISTHRSILDLDLTKFTTQKQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQA---PKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRCKANKIQDK-VTIDGY 244          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.612e-40
Identity = 94/222 (42.34%), Postives = 127/222 (57.21%), Query Frame = 3
Query:   60 MAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 722
            M + +  +FT+   L +S +S       K        +    F  W   + KAY    E   R+E FK N+ ++   NS+     +GLN+ ADL+NEEYR  YLG R   K      +     L R     P +VDWR+K AV  VKDQG CGSC++FST  +VEG+  I TG L+SLSEQ ++DC +S+ NEGCNGGLM  AFE+II N G+++EE YPY+
Sbjct:    1 MRLSITLIFTLI-VLSISFISAGNVFSHK--------QYQDSFIDWMRSNNKAYTHK-EFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYE 212          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.105e-40
Identity = 93/215 (43.26%), Postives = 127/215 (59.07%), Query Frame = 3
Query:  186 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR-------KNAKVVTIDD 782
            F ++  K  K+Y    E + RF +FK NL     H + + T + G+ +F+DLT  E+R  +LG +   KR  L +       LP     LP+  DWR+KGAV  VKDQGSCGSCWAFST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+++++GG+  E+DY Y   DGSC   +        N  VVT+D+
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLK---KRLRLPAHAQKAPILPTTN--LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKVVASVSNFSVVTLDE 257          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.591e-40
Identity = 83/187 (44.39%), Postives = 120/187 (64.17%), Query Frame = 3
Query:  204 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC--DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 740
            K G+ Y  L E+  R  +F DNL++I+E N +      TY + +N+F+D+TNE++ ++  G + G +  ++ +           +A P+S  VDWR KGAV  VKDQG CGSCWAFST   +EG + + TG L+SLSEQ+LVDC   + YN+GCNGG ++ A  ++ DNGG+DTE  YPY+A D +C
Sbjct:   26 KFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKGPRPAAVFTST---------DAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTC 203          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.591e-40
Identity = 91/201 (45.27%), Postives = 120/201 (59.70%), Query Frame = 3
Query:  168 DEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNS----ENRTYKVGLNRFADLTNEEYRSMYLG-----ARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 740
            D +   +  + ++H K Y    E+  R +IF +N   I +HN        +YK+GLN++AD+ + E++    G      +   +RT L       Y+P     +P SVDWR+ GAV  VKDQG CGSCWAFS+  A+EG +    G L+SLSEQ LVDC T Y N GCNGGLMD AF +I DNGGIDTE+ YPY+ ID SC
Sbjct:   22 DLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGAT---YIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSC 219          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.690e-40
Identity = 88/197 (44.67%), Postives = 117/197 (59.39%), Query Frame = 3
Query:  165 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 740
            D      +  W   H + Y    E+E R  I++ N+R I  HN E       + + +N F D+TNEE+R +  G R        K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC  +  N+GCNGGLMD+AF++I +NGG+D+EE YPY+A DGSC
Sbjct:   22 DQTFSAEWHQWKSTHRRLYGT-NEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQ------KHKKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSC 211          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 8.000e-40
Identity = 88/197 (44.67%), Postives = 116/197 (58.88%), Query Frame = 3
Query:  165 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 740
            D      +  W   H + Y    E+E R  +++ N+R I  HN E    K G    +N F D+TNEE+R +  G R        K K+   +   +   +P +VDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC     N+GCNGGLMD+AF++I +NGG+D+EE YPY+A DGSC
Sbjct:   22 DQTFNAQWHQWKSTHRRLYGT-NEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQ------KHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSC 211          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.045e-39
Identity = 89/202 (44.06%), Postives = 116/202 (57.43%), Query Frame = 3
Query:  204 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 785
            K GK Y +  E + RF +FK NLR    H   + +   G+ +F+DLT  E+R  +LG R G K    K       LP   E LP+  DWR  GAV  VK+QGSCGSCW+FS   A+EG N + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  EEDYPY   DG      K+  V ++ ++
Sbjct:   57 KFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLP--KDANKAPILPT--ENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNF 254          
The following BLAST results are available for this feature:
BLAST of CB290724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
ANAN_ANACO5.540e-4142.36Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CATS_HUMAN1.234e-4043.84Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
P34_SOYBN1.612e-4038.89P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CYSP3_DICDI1.612e-4042.34Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CYSP_PEA2.105e-4043.26Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CYSP1_HOMAM3.591e-4044.39Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATL_SARPE3.591e-4045.27Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATL1_MOUSE4.690e-4044.67Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATL1_RAT8.000e-4044.67Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
RD19A_ARATH1.045e-3944.06Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290724 ID=CB290724; Name=CB290724; organism=Citrus sinensis; type=EST; length=787bp
GCACTAGGGAAAAAAAAAAGCTCTTTTCTCCAAAGATGGGTTTGTTCAGA
TCACCAACCATGGCCATGTTTTTACTTTTTCTCTTCACTGTATCATCTGC
CTTGGACATGTCGATTGTATCTTATGATAAAACCCATGAGTCAAAATCTA
GCAGCTGGAGGACCGACGATGAGGTTATGGGTATGTTCGAGGCCTGGTTT
GTGAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTT
TGAGATCTTTAAGGACAATCTTAGGTTTATTGATGAACATAACTCAGAGA
ACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGACCAACGAG
GAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTC
CTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGT
TGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAA
GATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGT
AGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGC
AGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGT
TTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACAC
AGAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATC
GGAAAAATGCCAAAGTAGTTACCATTGATGACTATGA
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