CB290724

Overview
NameCB290724
Unique NameCB290724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:37..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.493e-33
Identity = 81/203 (39.90%), Postives = 117/203 (57.64%), Query Frame = 3
Query:  147 SSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 740
            SS+   ++ +   +E W   + K YN+  ++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G +         S+ +D  Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   D +C
Sbjct:   14 SSALYPEEILDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENC 211          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.255e-33
Identity = 79/197 (40.10%), Postives = 116/197 (58.88%), Query Frame = 3
Query:  171 EVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFID--EHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDW--RKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDT 746
            +   ++  W +K+ + Y +  ++  RF++F DNL +I   + ++E+ TY + LN+FAD++ +E+ S YL  R    +T+  +  +  +  +  E     VDW   KK     VK+QGSCGSCWAFS + A+E    I       LSEQ+LVDC   Y NEGCNGG MD AFE++ DN G+   +DYPY A DG+C T
Sbjct:   21 DTANLYANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLR--VPKTAKLNASNANFQYKGAE-----VDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVADN-GLAEAKDYPYTAKDGTCKT 209          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.237e-32
Identity = 80/196 (40.82%), Postives = 112/196 (57.14%), Query Frame = 3
Query:  153 SWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN--GGIDTEEDYPYKAIDG 734
            S   ++ +   F A+  K+GK Y    E+  RF  F++N+       + N     G+  F+D+T EE+R+ Y   R GA   +   KR  + +       P +VDWR+KGAV  VK QG CGSCWAFSTI  +EG  ++    L+SLSEQ LV CDT  + GCNGGLMD AF +I+++  G + TE  YPY + +G
Sbjct:   30 SLHVEESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARY---RNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT-IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNG 221          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.616e-32
Identity = 78/178 (43.82%), Postives = 104/178 (58.43%), Query Frame = 3
Query:  243 KRFEIFKDNLRFIDEHN----SENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD---------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGS 737
            +RFEIFK NL  I+E N    +     K G+N+FADL+++E+++ YL  +       L    +D        ++P + DWR +GAV  VK+QG CGSCW+FST   VEG + I    L+SLSEQ LVDCD          + +EGCNGGL   A+ +II NGGI TE  YPY A  G+
Sbjct:   47 ERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPV--ADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGT 222          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.047e-31
Identity = 76/204 (37.25%), Postives = 113/204 (55.39%), Query Frame = 3
Query:  165 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNA 761
            D  +   ++ W  K+ K+Y+ + E+ KR  ++++NL+ I  HN EN   K G    +N FAD T EE+R         A  T+  +++      +V   LP+  DWRK+G V  V++QG CGSCWAF+ + A+EG     TG+L  LS Q L+DC  S  N GC  G    AF +++ N G++ E  YPY+  DG C  + +NA
Sbjct:   22 DPNLDAEWQDWKTKYAKSYSPVEEELKR-AVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQK------QVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKDGPCRYHSENA 218          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.786e-31
Identity = 73/185 (39.46%), Postives = 107/185 (57.84%), Query Frame = 3
Query:  186 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 740
            FE +  K  K Y++  EK +RF+IF+ NL  I   N  + T +  +N+F+DL+ +E  S Y G     +  +         L R  +  P   DWR+   V  VK+QG CG+CWAF+T+A++E    I    LI+LSEQ+L+DCD   + GCNGGL+  A+E ++  GG+  E DYPY+  DG+C
Sbjct:   28 FEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVV---VLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCD-YVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNC 208          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.786e-31
Identity = 73/185 (39.46%), Postives = 107/185 (57.84%), Query Frame = 3
Query:  186 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 740
            FE +  K  K+Y++  EK +RF+IF+ NL  I   N  + T +  +N+FADL+ +E  S Y G     +  +         L R  +  P   DWR+   V  VK+QG CG+CWAF+T+ ++E    I     I+LSEQ+L+DCD   + GC+GGL+  AFE +++ GGI  E DYPY+A +G C
Sbjct:   28 FEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVV---VLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCD-FVDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDC 208          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.786e-31
Identity = 74/193 (38.34%), Postives = 107/193 (55.44%), Query Frame = 3
Query:  186 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYL--------PRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 740
            FE + + + K Y     K  RF+IFK NL  I+E N  N +    +N+F+DL+  E  + Y G    +K+ S   + +  +         P V + LP + DWR    +  VKDQG+CGSCWA + +  +E +  I    LI+LSEQ+L+DCD S N  C+GGLM  AFE +++ GG+  E DYPY+   G C
Sbjct:   32 FETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLT--SKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD-SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTKGVC 221          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.786e-31
Identity = 78/204 (38.24%), Postives = 118/204 (57.84%), Query Frame = 3
Query:  171 EVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTID 779
            ++  +F+ + + + + Y +  E   R  +F +N+    +  + +R T + G+ +F+DLT EE+R++YL      K    K K++      VG+  P   DWR KGAV +VKDQG CGSCWAFS    VEG   +  G+L+SLSEQEL+DCD   ++ C GGL   A+  I + GG++TE+DY Y+    SC+   + AKV   D
Sbjct:  182 KMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLL-RKEPGNKMKQAKS----VGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD-KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYIND 379          
BLAST of CB290724 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.333e-31
Identity = 84/236 (35.59%), Postives = 123/236 (52.12%), Query Frame = 3
Query:   72 LLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLG-ARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNA 761
            +LFL  +   +D +  + D + + + + WRT             KHGK YN   E+ KR  +++ N + I+ HN E       + + +N F DLTN E+  M  G  R   K+T +       Y+P+        VDWR+ G V  VK+QG C S WAFS   ++EG     T  LI LSEQ L+DC  ++   GC+GG M YAF+++ DNGG+ TEE YPY+     C  + +N+
Sbjct:    4 VLFLAILCLEVDSTAPTPDPSLDVEWNEWRT-------------KHGKTYNMNEERLKR-AVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLYVPK-------RVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRYHAENS 218          
The following BLAST results are available for this feature:
BLAST of CB290724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATK_PIG2.493e-3339.90Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATL2_PARTE3.255e-3340.10Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CYSP_TRYBB1.237e-3240.82Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CYSP1_DICDI1.616e-3243.82Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATJ_RAT1.047e-3137.25Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATV_NPVHC1.786e-3139.46Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATV_NPVCF1.786e-3139.46Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVAH1.786e-3138.34Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATF_HUMAN1.786e-3138.24Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
TEST2_RAT2.333e-3135.59Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290724 ID=CB290724; Name=CB290724; organism=Citrus sinensis; type=EST; length=787bp
GCACTAGGGAAAAAAAAAAGCTCTTTTCTCCAAAGATGGGTTTGTTCAGA
TCACCAACCATGGCCATGTTTTTACTTTTTCTCTTCACTGTATCATCTGC
CTTGGACATGTCGATTGTATCTTATGATAAAACCCATGAGTCAAAATCTA
GCAGCTGGAGGACCGACGATGAGGTTATGGGTATGTTCGAGGCCTGGTTT
GTGAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTT
TGAGATCTTTAAGGACAATCTTAGGTTTATTGATGAACATAACTCAGAGA
ACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGACCAACGAG
GAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTC
CTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGT
TGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAA
GATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGT
AGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGC
AGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGT
TTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACAC
AGAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATC
GGAAAAATGCCAAAGTAGTTACCATTGATGACTATGA
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