CB290730

Overview
NameCB290730
Unique NameCB290730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290730 vs. ExPASy Swiss-Prot
Match: UDA1_CAEEL (Nucleoside-diphosphatase uda-1 OS=Caenorhabditis elegans GN=uda-1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.586e-27
Identity = 70/182 (38.46%), Postives = 105/182 (57.69%), Query Frame = 1
Query:  256 NLKLSKSYAVIFDAGSSGSRVHVYCFDQNLDL----VPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNL-------GKKYS--NTVGVVDLGGGSVQMAY 762
            N    + + ++ DAGS+G+R+H+Y F  +  +    +P   + E+F + KPGLS++A  P +AA+SL  LL +A+  VP  +  KTP+ + ATAGLR L  D +D IL++V + +     F + P+ V V+ GS EG Y W T+N LL  L       G K +   +V   DLGGGS Q+ Y
Sbjct:   36 NQHTCRFFTIVIDAGSTGTRLHLYKFIHDPAIASHGMPFKVEKEIFQEVKPGLSSFAKSPSSAADSLEPLLQRARKEVPHFMWEKTPITLKATAGLRLLPGDMADDILESVEERIFNSGFFAAFPDAVNVMPGSDEGVYSWFTLNILLETLFTDEPTVGHKPAAHRSVAAFDLGGGSTQLTY 217          
BLAST of CB290730 vs. ExPASy Swiss-Prot
Match: ENTP6_RAT (Ectonucleoside triphosphate diphosphohydrolase 6 OS=Rattus norvegicus GN=Entpd6 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.690e-26
Identity = 64/162 (39.51%), Postives = 102/162 (62.96%), Query Frame = 1
Query:  277 YAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAY 762
            Y ++FDAGS+G+R+HV+ F +     P     E F   KPGLSAYA D + +A  +  LL+ A+  +P D    TP+ + ATAGLR L  + + ++LQ V+++ K  S F    + V++++G+ EG   W+T+N+L G+L    S++VG++DLGGGS Q+ +
Sbjct:   74 YGIMFDAGSTGTRIHVFQFARPPGETPTLTH-ETFKALKPGLSAYADDVEKSAQGIQELLNVAKQHIPYDFWKATPLVLKATAGLRLLPGEKAQKLLQKVKEVFK-ASPFLVGDDCVSIMNGTDEGVSAWITVNFLTGSLKTPGSSSVGMLDLGGGSTQITF 233          
BLAST of CB290730 vs. ExPASy Swiss-Prot
Match: ENTP5_MOUSE (Ectonucleoside triphosphate diphosphohydrolase 5 OS=Mus musculus GN=Entpd5 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.917e-26
Identity = 65/169 (38.46%), Postives = 96/169 (56.80%), Query Frame = 1
Query:  256 NLKLSKSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAY 762
            N+     Y ++FDAGS+G+R+HVY F Q         + E+F   KPGLSA+   P+  A ++  LL+ A+  +P+    +TPV + ATAGLR L    +  +L  V ++ K  S F      V+++DGS EG   WVT+N+L G L  +   TVG +DLGG S Q+ +
Sbjct:   41 NVSAGTFYGIMFDAGSTGTRIHVYTFVQKTAGQLPFLEGEIFDSVKPGLSAFVDQPKQGAETVQELLEVAKDSIPRSHWERTPVVLKATAGLRLLPEQKAQALLLEVEEIFK-NSPFLVPDGSVSIMDGSYEGILAWVTVNFLTGQLHGRGQETVGTLDLGGASTQITF 208          
BLAST of CB290730 vs. ExPASy Swiss-Prot
Match: YND1_SCHPO (Golgi apyrase OS=Schizosaccharomyces pombe GN=ynd1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.100e-25
Identity = 66/182 (36.26%), Postives = 103/182 (56.59%), Query Frame = 1
Query:  271 KSYAVIFDAGSSGSRVHVYCFDQNLDL-------------VPIGKDLELFVQTKPGLSAYASDPQAAANS-LASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLK--YKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAYAI 768
            + Y +  DAGSSGSR+ +Y +D + D                IG   +  ++ +PG+S++A++P+      L  LLD A   +P+D+  +TPV + ATAG+R LGVDA ++IL      +K  Y     +    + V+DG  EG Y W+  NYLL  L +K ++TVG +D+GG SVQ+A+ +
Sbjct:    3 RKYGIFIDAGSSGSRLLIYSWDYDTDSSLSDKVKKLPLIETGIGDGGKWSLKVQPGISSFANNPKHVGKKHLKELLDFAAHAIPKDVHKETPVFLSATAGMRLLGVDAQNKILSHACRYIKKNYDFDIPNCSNSIRVIDGKAEGMYGWLATNYLLKTLEEKDTSTVGFLDMGGASVQIAFEL 184          
BLAST of CB290730 vs. ExPASy Swiss-Prot
Match: MIG23_CAEBR (Nucleoside-diphosphatase mig-23 OS=Caenorhabditis briggsae GN=mig-23 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.525e-22
Identity = 61/188 (32.45%), Postives = 103/188 (54.79%), Query Frame = 1
Query:  262 KLSKSYAVIFDAGSSGSRVHVYCFDQNLD-----LVPIGKDLE-LFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNL-------------GKKYSNTVGVVDLGGGSVQMAYAI 768
            K  +SY VI DAGS+G+R+ VY +    D     + P+  D + +  +  PGLS + + P  AA  L  L++ A+  +P++ RP TPV + ATAG+R +  +  + +L  +R  L   ++ +   E + +++G  EG Y W+ +NY LG               G++ S TVG++D+GG S Q+A+ +
Sbjct:   39 KQERSYGVICDAGSTGTRLFVYNWVSTSDSELIQIEPVIYDNKPVMKKISPGLSTFGTKPDEAAEYLRPLMELAELHIPEEKRPYTPVFIFATAGMRLIPDEQKEAVLTNLRTELPKITSMQVLKEHIRIIEGKWEGIYSWIAVNYALGKFNRTFTPDFPGTSPGQQRSKTVGMIDMGGASAQIAFEL 226          
BLAST of CB290730 vs. ExPASy Swiss-Prot
Match: MIG23_CAEEL (Nucleoside-diphosphatase mig-23 OS=Caenorhabditis elegans GN=mig-23 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.626e-22
Identity = 65/231 (28.14%), Postives = 118/231 (51.08%), Query Frame = 1
Query:  133 SVLLVISIPVMLIAVVLLLMPGRAAPSDVAMDYGLSRKFSPNLKLSKSYAVIFDAGSSGSRVHVYCFDQNLD-----LVPIGKDLE-LFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYS-------------NTVGVVDLGGGSVQMAYAI 768
            ++L V ++    + V + ++    +P  +A D              +SY VI DAGS+G+R+ VY +    D     + P+  D + +  +  PGLS + + P  AA  L  L++ A+  +P++ RP TPV + ATAG+R +  +  + +L+ +R+ L   ++ +   E + +++G  EG Y W+ +NY LG   K  +              TVG++D+GG S Q+A+ +
Sbjct:    8 TILAVSAMIFFPVIVFIYVVEAHTSPKVIADDQ------------ERSYGVICDAGSTGTRLFVYNWISTSDSELIQIEPVIYDNKPVMKKISPGLSTFGTKPAQAAEYLRPLMELAERHIPEEKRPYTPVFIFATAGMRLIPDEQKEAVLKNLRNKLPKITSMQVLKEHIRIIEGKWEGIYSWIAVNYALGKFNKTATLDFPGTSPAHARQKTVGMIDMGGASAQIAFEL 226          
BLAST of CB290730 vs. ExPASy Swiss-Prot
Match: NTP1_CAEEL (Nucleoside-triphosphatase ntp-1 OS=Caenorhabditis elegans GN=ntp-1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.347e-22
Identity = 58/170 (34.12%), Postives = 96/170 (56.47%), Query Frame = 1
Query:  277 YAVIFDAGSSGSRVHVYCFDQ------NLDLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAYAI 768
            Y VI DAGSSG+R+ VY          N+D + I +   +  +  PGLS++   P+     L  LL  A+  +P +   +T + + ATAG+R L     D I++ +++ LK  +A +     + ++DG+ EG Y W+ +NY+LG   K+  + VG++D+GG SVQ+A+ I
Sbjct:   25 YGVICDAGSSGTRLFVYTLKPLSGGLTNIDTL-IHESEPVVKKVTPGLSSFGDKPEQVVEYLTPLLRFAEEHIPYEQLGETDLLIFATAGMRLLPEAQKDAIIKNLQNGLKSVTALRVSDSNIRIIDGAWEGIYSWIAVNYILGRFDKENDSKVGMIDMGGASVQIAFEI 193          
BLAST of CB290730 vs. ExPASy Swiss-Prot
Match: ENTP8_MOUSE (Ectonucleoside triphosphate diphosphohydrolase 8 OS=Mus musculus GN=Entpd8 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 3.087e-20
Identity = 74/212 (34.91%), Postives = 112/212 (52.83%), Query Frame = 1
Query:  178 VLLLMPGRAAPSDVAM-DYGLSRKFSPNLKLSKSYAVIFDAGSSGSRVHVYCFDQNL--DLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPE---W-VTVLDGSQEGSYQWVTINYLLGNLGKKYSN----------TVGVVDLGGGSVQMAY 762
            V + + G AA S + M    L +  +  L     + ++FDAGSS + + VY +  N   D   + + L   ++  PG+S+Y SDP  A  SL S L++A +++PQ   P+TP  +G+TAG+R L    S +     RD+L   S   SK     W   +L G  EG++ W+TINY+LG L  KYS+           VG +DLGG S Q+++
Sbjct:    9 VFMALLGVAAASGLTMLVLILVKAINVLLPADTKFGIVFDAGSSHTSLFVYQWPANKEKDTGVVSQALTCQIEG-PGISSYTSDPTQAGESLKSCLEEALALIPQAQHPETPTFLGSTAGMRLL----SQKNSSQARDILAAVSQTLSKSPVDFWGAKILAGQDEGAFGWITINYVLGML-LKYSSGQWILPEEGMLVGALDLGGASTQISF 214          
BLAST of CB290730 vs. ExPASy Swiss-Prot
Match: ENTP8_CHICK (Ectonucleoside triphosphate diphosphohydrolase 8 OS=Gallus gallus GN=ENTPD8 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.613e-19
Identity = 58/173 (33.53%), Postives = 92/173 (53.18%), Query Frame = 1
Query:  277 YAVIFDAGSSGSRVHVYCFDQNLDL-VPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGK----------KYSNTVGVVDLGGGSVQMAY 762
            Y ++FDAGS+ + ++VY +  + +    I   +E       G+S+YA DP  A  SL   LDKA +V+P + + +TP  +GATAG+R L    S +  Q   ++ K    F        +L G++EGS+ W+T+NYLL  L K          + +  +G +DLGG S Q+ +
Sbjct:   41 YGLVFDAGSTHTALYVYQWPADKENGTGIVSQVESCTVNGSGISSYADDPAGAGASLKPCLDKAMAVIPVEQQWQTPTYLGATAGMRLLREQNSTKAEQVFAEVSKAIREFPVDFRGAQILTGNEEGSFGWITVNYLLETLIKFSFAGKWEHPQNTEVLGALDLGGASTQITF 213          
BLAST of CB290730 vs. ExPASy Swiss-Prot
Match: ENTP8_RAT (Ectonucleoside triphosphate diphosphohydrolase 8 OS=Rattus norvegicus GN=Entpd8 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.413e-19
Identity = 73/212 (34.43%), Postives = 111/212 (52.36%), Query Frame = 1
Query:  178 VLLLMPGRAAPSDVAM-DYGLSRKFSPNLKLSKSYAVIFDAGSSGSRVHVYCFDQNL--DLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPE---W-VTVLDGSQEGSYQWVTINYLLGNLGKKYSN----------TVGVVDLGGGSVQMAY 762
            V +++ G AA S + M    L +  +  L     + ++FDAGSS + + VY +  N   D   + + L   V+  PG+S+Y SDP  A  SL S L +A +++PQ   P TP  +GATAG+R L    S +     +D+L   S   S+     W   +L G  EG++ W+T+NY+LG L  KYS+           VG +DLGG S Q+++
Sbjct:    9 VFMVLLGVAAASGLTMLILILVKATNVLLPADTKFGILFDAGSSHTSLFVYQWPANKEKDTGVVSQALACQVEG-PGISSYTSDPTQAGESLKSCLQEALALIPQTQHPVTPAFLGATAGMRLL----SQKNSSQAQDILAAVSQTLSRAPVDFWGARILAGQDEGAFGWITVNYVLGML-LKYSSGQWILPEDGTLVGALDLGGASTQISF 214          
The following BLAST results are available for this feature:
BLAST of CB290730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
UDA1_CAEEL7.586e-2738.46Nucleoside-diphosphatase uda-1 OS=Caenorhabditis e... [more]
ENTP6_RAT1.690e-2639.51Ectonucleoside triphosphate diphosphohydrolase 6 O... [more]
ENTP5_MOUSE4.917e-2638.46Ectonucleoside triphosphate diphosphohydrolase 5 O... [more]
YND1_SCHPO7.100e-2536.26Golgi apyrase OS=Schizosaccharomyces pombe GN=ynd1... [more]
MIG23_CAEBR2.525e-2232.45Nucleoside-diphosphatase mig-23 OS=Caenorhabditis ... [more]
MIG23_CAEEL5.626e-2228.14Nucleoside-diphosphatase mig-23 OS=Caenorhabditis ... [more]
NTP1_CAEEL7.347e-2234.12Nucleoside-triphosphatase ntp-1 OS=Caenorhabditis ... [more]
ENTP8_MOUSE3.087e-2034.91Ectonucleoside triphosphate diphosphohydrolase 8 O... [more]
ENTP8_CHICK2.613e-1933.53Ectonucleoside triphosphate diphosphohydrolase 8 O... [more]
ENTP8_RAT3.413e-1934.43Ectonucleoside triphosphate diphosphohydrolase 8 O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dc01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dc01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290730 ID=CB290730; Name=CB290730; organism=Citrus sinensis; type=EST; length=770bp
GGCAACGGTCAGATCCGGTACCGATCCCCTTCCTCCGCAGAGCTCCTCGA
GACCGGCTCCTCGGACAAAATGATCAAGCGGCCTCACAATCGCCAGCACG
ACTCCTTCTCCGACAAGATCCAGCGTTACCGCAGCGTTCTGCTCGTCATT
TCCATCCCCGTCATGTTGATTGCCGTCGTCTTGCTTCTCATGCCCGGCCG
CGCCGCCCCCTCCGACGTCGCTATGGATTACGGTCTCAGCCGCAAGTTTT
CCCCCAATTTGAAGCTCTCCAAGAGTTACGCTGTTATTTTTGACGCCGGC
AGTTCGGGCAGTCGTGTGCACGTGTATTGCTTTGATCAGAACTTGGATCT
TGTGCCAATTGGCAAAGATCTCGAGCTTTTTGTTCAGACTAAACCAGGTT
TGAGTGCATATGCAAGTGATCCGCAAGCAGCAGCAAACTCACTAGCCTCG
CTTCTTGATAAGGCTCAAAGTGTTGTGCCACAAGATTTGCGACCAAAGAC
ACCAGTTAAAGTTGGGGCAACTGCAGGGTTAAGGCAATTGGGAGTTGATG
CATCTGATAGAATTTTGCAAGCAGTTAGGGATCTCCTTAAATATAAAAGT
GCCTTCAAATCTAAGCCAGAGTGGGTTACTGTTTTGGATGGTTCCCAAGA
AGGTTCTTATCAGTGGGTAACAATAAACTATCTCTTAGGGAATTTGGGGA
AGAAATATTCAAACACAGTTGGAGTGGTTGATCTTGGCGGTGGATCTGTA
CAAATGGCTTATGCAATCTC
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