CB290735

Overview
NameCB290735
Unique NameCB290735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL2_KLULA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Kluyveromyces lactis GN=VMA11 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.717e-28
Identity = 70/162 (43.21%), Postives = 98/162 (60.49%), Query Frame = -2
Query:  356 MSSAFSGDETAPXXXXXXXXXXXXF----SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 829
            MS A S D+ AP            F    SC+GAA GTAKSG+G++ +G  +PEL+MKS++PVVM+G+L +YGL++AV+I+ G++P  + Y LF+G+                G AIGIVGD GVR    QP+LFVG+           LYG+IV +IL++R
Sbjct:    1 MSQAISEDQYAPLFAPFFGFAGCAFAMILSCLGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILAVYGLVVAVLIAGGLSP-TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGIVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTR 161          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL_CANTR (V-type proton ATPase 16 kDa proteolipid subunit OS=Candida tropicalis GN=VMA3 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28
Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = -2
Query:  347 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQ 754
            +C GA+YGTAKSGVG+ +  V RP+L++K++VPVVMAG++ IYGL+++V++S  ++ K     L+ G+                G AIGIVGDAGVR  AQQP+LFVGM           LYGLIV ++L+SRA Q
Sbjct:   24 TCFGASYGTAKSGVGICATSVTRPDLLVKNVVPVVMAGIIAIYGLVVSVLVSDSLSQKQA---LYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRASQ 156          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL2_YEAST (V-type proton ATPase subunit c' OS=Saccharomyces cerevisiae GN=VMA11 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27
Identity = 62/136 (45.59%), Postives = 89/136 (65.44%), Query Frame = -2
Query:  347 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQ 754
            SC+GAA GTAKSG+G+A +G  +PEL+MKS++PVVM+G+L IYGL++AV+I+  ++P  + Y LF+G+                G AIG+VGD GVR    QP+LFVG+           LYG+IV +IL++R  +
Sbjct:   30 SCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE 164          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL2_CANGA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Candida glabrata GN=VMA11 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.300e-27
Identity = 61/136 (44.85%), Postives = 89/136 (65.44%), Query Frame = -2
Query:  347 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQ 754
            SC+GAA GTAKSG+G+A +G  +PEL+MKS++PVVM+G+L IYGL++AV+I+  ++P  + Y LF+G+                G AIGIVGD GVR    QP+LFVG+           LYG+I+ +IL+++  +
Sbjct:   30 SCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEEYTLFNGFMHLSCGLCVGFACLSSGYAIGIVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIIALILNTKGSE 164          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL_DICDI (V-type proton ATPase proteolipid subunit OS=Dictyostelium discoideum GN=vatP PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.004e-27
Identity = 68/130 (52.31%), Postives = 86/130 (66.15%), Query Frame = -2
Query:  359 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSS 748
            MGAAYGTAK+ VG+++MGVM+P+LV+K+ +PV+ AGV+ IYGLII VI+  GI P A +Y L   +                GMAIGIVGD+GVRA  QQPKL+V M           LYGLI+GI+LSS
Sbjct:   45 MGAAYGTAKASVGISNMGVMKPDLVIKAFIPVIFAGVIAIYGLIICVILVGGIKPNA-NYTLMKSFTDLGAGLTVGLCGLAAGMAIGIVGDSGVRAFGQQPKLYVIMMLILIFSEALGLYGLIIGILLSS 173          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL2_ASHGO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Ashbya gossypii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.141e-26
Identity = 60/133 (45.11%), Postives = 88/133 (66.17%), Query Frame = -2
Query:  356 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 754
            S +GAA GTAKSG+G++ +G  RPEL+MKS++PVVM+G+L +YGL++AV+++ G++P  + Y LF+G+                G AIGIVGD GVR    QP+LFVG+           LYG+I+ +IL++R
Sbjct:   29 SSLGAAIGTAKSGIGISGIGTFRPELIMKSLIPVVMSGILAVYGLVVAVLVAGGLSP-TEEYTLFNGFMHLAAGLCVGFACLSSGYAIGIVGDVGVRKFMHQPRLFVGIVLILIFAEVLGLYGMIIALILNTR 160          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL1_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 1 OS=Caenorhabditis elegans GN=vha-1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.491e-26
Identity = 62/129 (48.06%), Postives = 84/129 (65.12%), Query Frame = -2
Query:  359 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSS 745
            G+AYGTAK+G G+ASM V RP+LVMK+I+PVVMAG++ IYGL++AVI+S  + P   +Y + + +                G AIGI GDAGVRA +QQP++FVGM           LYG+IV +IL +
Sbjct:   40 GSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALILGA 168          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL2_DEBHA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Debaryomyces hansenii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.321e-26
Identity = 58/133 (43.61%), Postives = 89/133 (66.92%), Query Frame = -2
Query:  356 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 754
            SC GAA GTAKSG+G++ +G  +PEL+MKS++PVVM+G+L +YGL+++V+I+ G++P  ++Y LF+G+                G +IGIVGD GVR    QP+LFVG+           LYG+I+ +IL+++
Sbjct:   29 SCAGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILSVYGLVVSVLIAGGLSP-TENYSLFNGFMHLACGLSVGFACLASGYSIGIVGDEGVRQFMHQPRLFVGIVLILIFAEVLGLYGMIIALILNTK 160          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit OS=Schizosaccharomyces pombe GN=vma3 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.665e-26
Identity = 62/131 (47.33%), Postives = 87/131 (66.41%), Query Frame = -2
Query:  353 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRA 745
            GAAYGTAK+GVG+++MGV+RP+L++K+ +PVVMAG++ IYGL+++V+IS  +    +   L+ G+                G AIGIVGDAGVR  AQQP+LFV M           LYGLIV ++L++RA
Sbjct:   28 GAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAIYGLVVSVLISGNLK---QILSLYSGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVAMILILIFAEVLGLYGLIVALLLNTRA 155          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL1_YEAST (V-type proton ATPase subunit c OS=Saccharomyces cerevisiae GN=VMA3 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.665e-26
Identity = 63/134 (47.01%), Postives = 87/134 (64.93%), Query Frame = -2
Query:  347 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQ 748
            +GAAYGTAKSGVG+ +  V+RP+L+ K+IVPV+MAG++ IYGL+++V++   +  K     L+ G+                G AIGIVGDAGVR ++QQP+LFVGM           LYGLIV ++L+SRA Q
Sbjct:   26 LGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQA---LYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQ 156          
The following BLAST results are available for this feature:
BLAST of CB290735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL2_KLULA2.717e-2843.21V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL_CANTR6.053e-2847.79V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_YEAST1.761e-2745.59V-type proton ATPase subunit c' OS=Saccharomyces c... [more]
VATL2_CANGA2.300e-2744.85V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL_DICDI3.004e-2752.31V-type proton ATPase proteolipid subunit OS=Dictyo... [more]
VATL2_ASHGO1.141e-2645.11V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL1_CAEEL1.491e-2648.06V-type proton ATPase 16 kDa proteolipid subunit 1 ... [more]
VATL2_DEBHA3.321e-2643.61V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL_SCHPO5.665e-2647.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL1_YEAST5.665e-2647.01V-type proton ATPase subunit c OS=Saccharomyces ce... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dc04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dc04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290735 ID=CB290735; Name=CB290735; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTTTTTTTTAGACATAACCACACAATCAATTCGTGCACAGAA
ATTTGTAAACCCCAAAAGCCAACAAATAACACAAACCATAATGTGTAAGG
ATGGTTCTTTCATACGTCTGATTTCACAGTAAAAATACAACAATACATGT
CGAGAACTCAAGCATTATTTTAAGGGGAAAATCTTGCCCTTAATGGTACA
GGCAGAATGGAGCTACTTAATAATCTAGTGGGATATTGACAAACACCTCA
ACATTTCACATGGTGTCCTAGCATCATCTAAGTGAGCATGACCAAATAAT
TTTGAGAAACCTCTGTTCTGAACCACGCATCCTAATCTGCTCTGGATTGG
CCAGCTCGGGAAGAAAGAATAATGCCAACAATGAGACCATACAACGCCAA
TGCCTCAGCAAAAATGAGAATGAGAATCATTCCAACAAAAAGCTTTGGTT
GCTGTGCATTAGCTCTGACACCAGCATCACCAACGATGCCAATAGCCATA
CCAGCAGAGAGACCAGCGAGGCCGCAAGCGAGACCCGAAGACAAATGAGC
GTAGCCATCGAATAGATAATATGATTTGGCCTTTGGGTTAATGCCAGTAC
TAATAATAACAGCAATAATTAAACCATAAATACCTAACACTCCCGCCATC
ACAACTGGCACAATCGATTTCATTACAAGCTCTGGCCTCATCACTCCCAT
CGATGCTACGCCCACTCCACTCTTCGCCGTCCCATACGCCGCTCCCATGC
AGGAGAAAACAAGGGCAGCAGCGGCGCCGAGGAACCCGAAAAAAGGCGCC
GTTTCATCGCCACTGAATGCGGATGACATTTCAATTCCTCCTAAA
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