CB290737

Overview
NameCB290737
Unique NameCB290737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.317e-44
Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = -1
Query:  406 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSL 861
            + K L  NP +G  AG ++E N FEW   I+GP DT +E G F AI++FP +YP+SPP +RFT EM+HPN+YPDG+VCISILH PGDDP GYE + ERW+PV +VE            PNDES AN+DA+K WR+ +++F K   + V+KSL
Sbjct:   12 EYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQKSL 163          
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.250e-44
Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = -1
Query:  406 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSL 861
            + K L  NP +G  AG ++E N FEW   I+GP DT +E G F AI++FP +YP+SPP +RFT EM+HPN+YPDG+VCISILH PGDDP GYE + ERW+PV +VE            PNDES AN+DA+K WR+ +++F K   + V+KSL
Sbjct:   12 EYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSL 163          
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.250e-44
Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = -1
Query:  406 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSL 861
            + K L  NP +G  AG ++E N FEW   I+GP DT +E G F AI++FP +YP+SPP +RFT EM+HPN+YPDG+VCISILH PGDDP GYE + ERW+PV +VE            PNDES AN+DA+K WR+ +++F K   + V+KSL
Sbjct:   12 EYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSL 163          
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.250e-44
Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = -1
Query:  406 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSL 861
            + K L  NP +G  AG ++E N FEW   I+GP DT +E G F AI++FP +YP+SPP +RFT EM+HPN+YPDG+VCISILH PGDDP GYE + ERW+PV +VE            PNDES AN+DA+K WR+ +++F K   + V+KSL
Sbjct:   12 EYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSL 163          
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 7.227e-40
Identity = 77/153 (50.33%), Postives = 100/153 (65.36%), Query Frame = -1
Query:  406 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSL 864
            K+ K+L +N  DG +AG  +E + F W   I GP  T +EGG + A + FP +YP+ PPT++F  E +HPNVY DG VCISILH PGDDPN YE ++ERW+PV +VE            PNDES ANIDA K WRE ++E+ + V R  RK+L
Sbjct:   12 KEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARKTL 164          
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.746e-39
Identity = 78/153 (50.98%), Postives = 99/153 (64.71%), Query Frame = -1
Query:  406 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSL 864
            K+L+ L K+   G  AG   E+N+F W   I GPPDT Y  G FNA + FP +YP+SPP + FT  + HPN+YP+G+VCISILH PGDDPN YELA ERW+PV +VE            PN ES ANIDA   WR+ + EF+++V   + KSL
Sbjct:   11 KELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSL 163          
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.746e-39
Identity = 76/155 (49.03%), Postives = 102/155 (65.81%), Query Frame = -1
Query:  406 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAA---KEWRERKDEFKKKVSRCVRKSL 861
            +LK L + PV+GF   LVDES+++ W V+I GPP+TLYEGG+F A + FP +YP SPPT RF ++MWHPN+Y +G VCISILHPP DDP   EL +ERW P   V             PN  SPAN+DA+   ++WR+ K +  K+ +  +RK +
Sbjct:   16 ELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGK-DKEYAEIIRKQV 169          
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.746e-39
Identity = 76/155 (49.03%), Postives = 102/155 (65.81%), Query Frame = -1
Query:  406 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAA---KEWRERKDEFKKKVSRCVRKSL 861
            +LK L + PV+GF   LVDES+++ W V+I GPP+TLYEGG+F A + FP +YP SPPT RF ++MWHPN+Y +G VCISILHPP DDP   EL +ERW P   V             PN  SPAN+DA+   ++WR+ K +  K+ +  +RK +
Sbjct:   16 ELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGK-DKEYAEIIRKQV 169          
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.746e-39
Identity = 76/155 (49.03%), Postives = 102/155 (65.81%), Query Frame = -1
Query:  406 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAA---KEWRERKDEFKKKVSRCVRKSL 861
            +LK L + PV+GF   LVDES+++ W V+I GPP+TLYEGG+F A + FP +YP SPPT RF ++MWHPN+Y +G VCISILHPP DDP   EL +ERW P   V             PN  SPAN+DA+   ++WR+ K +  K+ +  +RK +
Sbjct:   16 ELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGK-DKEYAEIIRKQV 169          
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.727e-37
Identity = 72/155 (46.45%), Postives = 98/155 (63.23%), Query Frame = -1
Query:  406 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAA---KEWRERKDEFKKKVSRCVRKSL 861
            +LK L + PV+GF   LVDE +++ W V+I GPP+T YEGG+F A + FP +YP SPP  RF ++MWHPN+Y  G VCISILHPP DDP   EL +ERW P   V             PN  SPAN+DA+   ++W+E K +  ++ +  +RK +
Sbjct:   16 ELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGK-DREYTDIIRKQV 169          
The following BLAST results are available for this feature:
BLAST of CB290737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
UB2G2_BOVIN6.317e-4453.29Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus G... [more]
UB2G2_PONAB8.250e-4453.29Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii... [more]
UB2G2_MOUSE8.250e-4453.29Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus... [more]
UB2G2_HUMAN8.250e-4453.29Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens... [more]
UBC7_SCHPO7.227e-4050.33Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosa... [more]
UBC7_YEAST2.746e-3950.98Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharo... [more]
UB2R2_RABIT2.746e-3949.03Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus ... [more]
UB2R2_MOUSE2.746e-3949.03Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus... [more]
UB2R2_HUMAN2.746e-3949.03Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens... [more]
UB2R1_MOUSE5.727e-3746.45Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dc05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dc05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290737 ID=CB290737; Name=CB290737; organism=Citrus sinensis; type=EST; length=867bp
TTTTTTTTTTTTTTTTTAATCGTAAACATAACCTATATTCTCGATACCAT
GAAATAGCAAATATAACAAAATTAGAGATTTAGAGCTATCCAATCAATCT
TGAAAGAGGAGATTAGACAGCTCCATGCTTGAATCAGCAGGCTAAGGTTG
GGGCAAGACAGAAGAAAGAATTGCAAAGAAATCATCAACAATCAAACTAG
CACAAGTTTTAAGAATTGCAAAAAGAAAAGTCGAGGTTATAAAGGATTGA
GAAACAAGAAAAAAAAAAAAAAACTTAATTTTAGTTCTACAAGCTGCAAT
TTATTGTCCGATGACCACCAATCCCTTTTTCCAATGAAAAAAGGCGTGAT
GCTCCTAAACAGAGATGCATTGCAGCACGCAATTGGAAAATCAACTCAAC
ATTTCTAGTGATTTTCTAACACAGCGACTAACTTTCTTCTTAAATTCATC
CTTTCTTTCTCTCCATTCTTTCGCAGCATCAATGTTTGCAGGAGATTCGT
CATTTGGGCTGGAAAGCATTGAGATAATACTTAAAACTATGCTCTCAACC
GTATGTACGGGAGTCCACCGTTCGGTTGCAAGCTCATAGCCATTTGGATC
ATCACCCGGGGGATGAAGAATTGAAATGCAAACCTTTCCGTCAGGGTAAA
CATTAGGATGCCACATCTCTGATGTAAACCTCACAGTTGGAGGACTCACA
GGGTAATTATCAGGAAAAGTCATTATGGCATTGAAGAATCCCCCCTCATA
TAAAGTATCAGGGGGTCCAATAATGGACACACTCCATTCAAAGACATTGC
TCTCATCCACCAACCCAGCAGAGAATCCATCAACTGGGTTCTTACAAAGA
TCTTTGAGCTGCTTCTG
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