CB290737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.058e-14 Identity = 42/135 (31.11%), Postives = 67/135 (49.63%), Query Frame = -1 Query: 460 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWR 864 K+ + L PV G A DESN + V I GP D+ +EGG F + P+ YP++ P VRF ++++HPNV G++C+ IL ++W+P + +PN + P D A++W+ Sbjct: 10 KETQRLLAEPVPGIKAE-PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.058e-14 Identity = 41/151 (27.15%), Postives = 74/151 (49.01%), Query Frame = -1 Query: 412 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 864 K+L DL ++P SAG V + +++ W SI+GP D+ Y GG F + FP +YP PP + FT++++HPN+ +G +C+ IL ++W+P T+ N + P + A ++ + +++ +K Sbjct: 9 KELSDLERDPPTSCSAGPVGD-DLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDIL-------------KDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKK 145
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.058e-14 Identity = 41/140 (29.29%), Postives = 71/140 (50.71%), Query Frame = -1 Query: 445 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDE 864 K+++ L ++P G A E N+ + +++ GP + YEGG F+ + PD YP+ PP VRF ++++HPNV G++C+S L + W+P + +PN + P + D AK W+E + + Sbjct: 9 KEIETLTRDPPPGIVAAPT-EDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTL-------------KKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQ 134
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.993e-14 Identity = 39/131 (29.77%), Postives = 65/131 (49.62%), Query Frame = -1 Query: 433 FSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKK 825 FS G + +N++EW+ I GP T YEGG FN + FP +YP PP F + ++HPN+ +G +C++IL ++WTP VE PN + P + + ++ + +F ++ Sbjct: 27 FSIGQ-NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNIL-------------KDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQR 143
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.993e-14 Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = -1 Query: 475 LVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV-YPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDA 813 + D++N+F+W+ I GP +T YEGG F + P+ YP+ PP VRF ++++HPNV + G++C+ IL W+P T++ P +SP N D+ Sbjct: 28 ICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDIL-------------KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDS 128
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14 Identity = 36/112 (32.14%), Postives = 60/112 (53.57%), Query Frame = -1 Query: 475 DESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV-YPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDA 807 DES+++ W I GPPDT YE G F ++ P NYP+ PPT++F ++++HPN+ + G++C+ +L W+ ++T++ P +SP N DA Sbjct: 26 DESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYPLQPPTIKFVTKIFHPNIHFKTGEICLDLL-------------KTSWSAIYTLQSVCRSIIALLSLPEADSPLNCDA 124
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14 Identity = 41/142 (28.87%), Postives = 72/142 (50.70%), Query Frame = -1 Query: 439 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFK 864 K+LK+L ++P SAG E ++F W +I+GP ++ Y GG F + FP +YP PP V F ++++HPN+ +G +C+ IL ++W+P T+ PN + P + A ++ K +++ Sbjct: 8 KELKELQRDPPVSCSAGPTGE-DMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDIL-------------KDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYE 135
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14 Identity = 42/138 (30.43%), Postives = 68/138 (49.28%), Query Frame = -1 Query: 451 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERK 864 K+ + L PV G A DESN + V I GP D+ +EGG F + P+ YP++ P VRF ++++HPNV G++C+ IL ++W+P + +PN + P D A++W+ + Sbjct: 10 KETQRLLAEPVPGIKAE-PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNE 133
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14 Identity = 40/140 (28.57%), Postives = 72/140 (51.43%), Query Frame = -1 Query: 445 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDE 864 K+ + L + PV G +A + DE+N + V + GP D+ +EGG F + P++YP+S P VRF ++++HPN+ G++C+ +L ++W+P + +PN + P D A+ W+ + E Sbjct: 10 KETQRLMQEPVPGINA-IPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVL-------------KDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAE 135
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14 Identity = 40/140 (28.57%), Postives = 69/140 (49.29%), Query Frame = -1 Query: 445 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDE 864 K+ + L P G SA E N+ ++V I+GP + YEGG F + P+ YP++ P VRF ++++HPN+ G++C+ IL ++W+P + +PN + P + + AK W+ + E Sbjct: 12 KETQRLLSEPAPGISAS-PSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAE 137 The following BLAST results are available for this feature:
BLAST of CB290737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290737 ID=CB290737; Name=CB290737; organism=Citrus sinensis; type=EST; length=867bpback to top |