CB290737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 38/144 (26.39%), Postives = 70/144 (48.61%), Query Frame = -1 Query: 433 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKK 864 ++L+++ P +G L++ES+V + I GP T Y G F +T ++P++PP F ++++HPNV +G++C++ L + W P ++ PN ES N +A K ER D++ ++ Sbjct: 21 RELQEMETTPPEGIKV-LINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTL-------------KKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQR 150
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 38/144 (26.39%), Postives = 70/144 (48.61%), Query Frame = -1 Query: 433 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKK 864 ++L+++ P +G L++ES+V + I GP T Y G F +T ++P++PP F ++++HPNV +G++C++ L + W P ++ PN ES N +A K ER D++ ++ Sbjct: 21 RELQEMETTPPEGIKV-LINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTL-------------KKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQR 150
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 38/127 (29.92%), Postives = 60/127 (47.24%), Query Frame = -1 Query: 436 LVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKK 813 LVDE N E I GPPDT YEGG + + P+ YP +PP VRF +++WHPN+ G +C+ IL ++W T+ + + P + A ++++ + FK+ Sbjct: 31 LVDE-NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL-------------KDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQ 143
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 38/127 (29.92%), Postives = 60/127 (47.24%), Query Frame = -1 Query: 436 LVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKK 813 LVDE N E I GPPDT YEGG + + P+ YP +PP VRF +++WHPN+ G +C+ IL ++W T+ + + P + A ++++ + FK+ Sbjct: 31 LVDE-NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL-------------KDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQ 143
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 38/127 (29.92%), Postives = 60/127 (47.24%), Query Frame = -1 Query: 436 LVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKK 813 LVDE N E I GPPDT YEGG + + P+ YP +PP VRF +++WHPN+ G +C+ IL ++W T+ + + P + A ++++ + FK+ Sbjct: 31 LVDE-NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL-------------KDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQ 143
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 35/121 (28.93%), Postives = 59/121 (48.76%), Query Frame = -1 Query: 412 IGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV-EXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 771 + P + Y+GG F + PD Y + PP V+ +++WHPN+ G++C+S+L D G W P T+ + N P NI+AA+ + K++F+ KV +R+ Sbjct: 69 VSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTG-------WAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEHHLQDKEDFRDKVDEYIRR 182
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 39/152 (25.66%), Postives = 65/152 (42.76%), Query Frame = -1 Query: 412 QKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 867 +++L L P G + D+ + + I+G +T YE G F + P+ YP PP +RF + ++HPN+ G++C+ +L P P G W P + PN + P D + E++ K F K + K Sbjct: 8 KRELHMLATEPPPGITCWQ-DKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLP---PKG------AWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEK 149
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 46/169 (27.22%), Postives = 77/169 (45.56%), Query Frame = -1 Query: 418 QKQLKDLCKNPVDGFSAGLVDES-NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV-YPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPAN--------------IDAAKEWRE---RKDEFKKKVSRCV 867 QK+L+D C+ D + +S N+ + +I GP T YEGG F +T PD YP PP ++F++++WHPN+ G +C+ IL ++W+P T++ +P + P + + A+ W E +K ++KV R V Sbjct: 8 QKELQD-CERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDIL-------------KDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSSLEEKVKRLV 162
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 48/166 (28.92%), Postives = 75/166 (45.18%), Query Frame = -1 Query: 373 QKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDT-LYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSLEMLS*FSNCVL 867 QK +++L P ++ N E S++II PD Y+GG F TF + YP+ PP V ++++HPN+ P GK+C++IL E W+P ++ PN P N +AA+ + K EF V R + S + CV+ Sbjct: 38 QKDIEELELPPT--VRVNIISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILR-------------EDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNLV-RLAMSGAMVGSTYYECVI 187 The following BLAST results are available for this feature:
BLAST of CB290737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290737 ID=CB290737; Name=CB290737; organism=Citrus sinensis; type=EST; length=867bpback to top |