CB290737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 5.727e-37 Identity = 72/155 (46.45%), Postives = 98/155 (63.23%), Query Frame = -1 Query: 406 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAA---KEWRERKDEFKKKVSRCVRKSL 861 +LK L + PV+GF LVDE +++ W V+I GPP+T YEGG+F A + FP +YP SPP RF ++MWHPN+Y G VCISILHPP DDP EL +ERW P V PN SPAN+DA+ ++W+E K + ++ + +RK + Sbjct: 16 ELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGK-DREYTDIIRKQV 169
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.490e-32 Identity = 69/161 (42.86%), Postives = 95/161 (59.01%), Query Frame = -1 Query: 394 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWR-----ERKDEFKKKVSRCVRKSLEMLS 861 + ++L +NP + F V+E+N+ EW V + GP DT YEGG F A +TFP NYP PP + FTSEMWHPN+YPDG++CISILH + G W+P +E PN +SPAN+DAAK +R E + + +V + V+KSL+ S Sbjct: 9 EYRNLTENPSEHFKVS-VNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGM-----TWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVKKTVKKSLDECS 163
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.490e-32 Identity = 68/161 (42.24%), Postives = 95/161 (59.01%), Query Frame = -1 Query: 394 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWR-----ERKDEFKKKVSRCVRKSLEMLS 861 + + L +NP + F V+E+N+ EW V + GPPDTLYEGG F A + FP YP +PP + FTSEMWHPN+YPDG++CISILH + G W+P ++ PN +SPAN+DAAK +R E + + +V + V+KSL+ S Sbjct: 9 EYRHLIENPSENFKIS-VNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGM-----TWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKEDLESYPMEVKKTVKKSLDECS 163
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.252e-32 Identity = 69/161 (42.86%), Postives = 95/161 (59.01%), Query Frame = -1 Query: 394 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWR-----ERKDEFKKKVSRCVRKSLEMLS 861 + + L +NP + F V+E+++ EW V + GPPDTLYEGG F A + FP YP +PP + FTSEMWHPN+YPDGK+CISILH + G W+P ++ PN +SPAN+DAAK +R E + + +V R V+KSL+ S Sbjct: 9 EYRHLIENPSENFKIS-VNENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGM-----TWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKLMHKEDLESYPMEVKRTVKKSLDECS 163
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.244e-32 Identity = 70/161 (43.48%), Postives = 94/161 (58.39%), Query Frame = -1 Query: 394 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWR-----ERKDEFKKKVSRCVRKSLEMLS 861 + + L +NP + F V+E+N+ EW V + GP DTLYEGG F A + FP NYP PP + FTSEMWHPN+Y DG+VCISILH + G W+PV ++ PN +SPAN+DAAK +R E + + +V R V+KSL+ S Sbjct: 9 EYRHLTENPSENFKVS-VNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGM-----TWSPVQKIDTILLSVISLLNEPNTDSPANVDAAKSYRRFVHKEDLESYPMEVKRTVKKSLDECS 163
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.753e-31 Identity = 69/161 (42.86%), Postives = 92/161 (57.14%), Query Frame = -1 Query: 394 QLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWR-----ERKDEFKKKVSRCVRKSLEMLS 861 + K+L NP + F V+E N+ EW V + GPPDTLYEGG F A + FP YP PP + FTSEMWHPN+Y DGK+CISILH + G W+P ++ PN +SPAN+DAAK +R E + + +V + V+KSL+ S Sbjct: 9 EYKNLIVNPSEHFKIS-VNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGM-----TWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYRKYLYKEDLESYPMEVKKTVKKSLDECS 163
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.973e-29 Identity = 63/146 (43.15%), Postives = 90/146 (61.64%), Query Frame = -1 Query: 409 KNPVDGFSAGLVDESNVFEWSVSI-IGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 843 K + F L D+SN+F W++ + + D++Y GGFF A M FP+++P SPP RFT ++HPNVY DG++CISILH G DP E E W+PV TVE PN SPAN+DAA ++R+ +++K++V V +S Sbjct: 23 KKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSG-DPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYKQRVKMEVERS 167
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23 Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = -1 Query: 409 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 864 + K L ++P G S G E+N+ +W+ I GP T +E G F ++ F + YP PPTVRF S+M+HPNVY DG +C+ IL RW+P + V PN SPAN AA+ ++E K E++K+VS V +S Sbjct: 11 RDFKRLQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23 Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = -1 Query: 409 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 864 + K L ++P G S G E+N+ +W+ I GP T +E G F ++ F + YP PPTVRF S+M+HPNVY DG +C+ IL RW+P + V PN SPAN AA+ ++E K E++K+VS V +S Sbjct: 11 RDFKRLQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23 Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = -1 Query: 409 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 864 + K L ++P G S G E+N+ +W+ I GP T +E G F ++ F + YP PPTVRF S+M+HPNVY DG +C+ IL RW+P + V PN SPAN AA+ ++E K E++K+VS V +S Sbjct: 11 RDFKRLQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148 The following BLAST results are available for this feature:
BLAST of CB290737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290737 ID=CB290737; Name=CB290737; organism=Citrus sinensis; type=EST; length=867bpback to top |