CB290737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19 Identity = 47/152 (30.92%), Postives = 79/152 (51.97%), Query Frame = -1 Query: 412 QKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 867 QK+L DL ++P SAG V + ++F W +I+GPPD+ Y+GG F + FP +YP PP + FT++++HPN+ +G +C+ IL +W+P TV PN + P D A+ ++ K+++ + +K Sbjct: 7 QKELSDLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK 144
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19 Identity = 47/152 (30.92%), Postives = 79/152 (51.97%), Query Frame = -1 Query: 412 QKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 867 QK+L DL ++P SAG V + ++F W +I+GPPD+ Y+GG F + FP +YP PP + FT++++HPN+ +G +C+ IL +W+P TV PN + P D A+ ++ K+++ + +K Sbjct: 7 QKELSDLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK 144
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19 Identity = 47/152 (30.92%), Postives = 79/152 (51.97%), Query Frame = -1 Query: 412 QKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 867 QK+L DL ++P SAG V + ++F W +I+GPPD+ Y+GG F + FP +YP PP + FT++++HPN+ +G +C+ IL +W+P TV PN + P D A+ ++ K+++ + +K Sbjct: 7 QKELSDLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK 144
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.200e-18 Identity = 52/148 (35.14%), Postives = 75/148 (50.68%), Query Frame = -1 Query: 424 QKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSR 867 Q +L +L P G SA D N+F W +I G DT+YE F + FP +YP PPTV+F ++ +HPNV +G +C+ IL ++W+PV+ V PN+ESP N AA W +DE+KK + + Sbjct: 12 QSELMNLMMGPSPGISA-FPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDIL-------------KDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLW-SNQDEYKKVLDK 144
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.954e-18 Identity = 46/130 (35.38%), Postives = 66/130 (50.77%), Query Frame = -1 Query: 409 NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 798 ++ W V I G P T +EGG + M FP+ YP PP RFT ++HPNVYP G VC+SIL+ E W P T++ PN SPA +A +++ K E++K+V R++ Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILN-----------EEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQAREN 155
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.326e-17 Identity = 45/151 (29.80%), Postives = 78/151 (51.66%), Query Frame = -1 Query: 412 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 864 K+L+DL ++P SAG V + ++F W +I+GPPD+ Y+GG F + FP +YP PP V FT+ ++HPN+ +G +C+ IL +W+P T+ PN + P + A+ ++ ++++ + RK Sbjct: 8 KELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 144
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.955e-17 Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = -1 Query: 412 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 864 K+LKDL K+P SAG V E ++F W +I+GP D+ Y GG F + FP +YP PP V F ++++HPN+ +G +C+ IL E+W+P T+ PN + P + A ++ K++++ +K Sbjct: 8 KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQK 144
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.955e-17 Identity = 46/151 (30.46%), Postives = 76/151 (50.33%), Query Frame = -1 Query: 412 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 864 K+LKDL K+P SAG V E ++F W +I+GPP++ Y GG F + FP +YP PP V F ++++HPN+ +G +C+ IL E+W+P T+ PN + P + A ++ + +++ +K Sbjct: 8 KELKDLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQK 144
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.955e-17 Identity = 46/151 (30.46%), Postives = 75/151 (49.67%), Query Frame = -1 Query: 412 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 864 K+L DL ++P SAG V E ++F W +I+GP D+ Y+GG F + FP YP PP V FT+ ++HPNV +G +C+ IL +W+P T+ PN + P + A+ ++ +D++ + +K Sbjct: 8 KELNDLAQDPPAQCSAGPVGE-DMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILR-------------SQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQK 144
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.955e-17 Identity = 46/151 (30.46%), Postives = 75/151 (49.67%), Query Frame = -1 Query: 412 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 864 K+L DL ++P SAG V E ++F W +I+GP D+ Y+GG F + FP YP PP V FT+ ++HPNV +G +C+ IL +W+P T+ PN + P + A+ ++ +D++ + +K Sbjct: 8 KELNDLAQDPPAQCSAGPVGE-DMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILR-------------SQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQK 144 The following BLAST results are available for this feature:
BLAST of CB290737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290737 ID=CB290737; Name=CB290737; organism=Citrus sinensis; type=EST; length=867bpback to top |