CB290737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.267e-16 Identity = 44/151 (29.14%), Postives = 73/151 (48.34%), Query Frame = -1 Query: 412 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 864 ++L DL K+P SAG V + ++F W +I+GP D+ Y GG F + FP +YP PP V FT+ ++HPN+ +G +C+ IL ++W+P T+ PN + P + A ++ + ++ RK Sbjct: 8 RELADLGKDPPSSCSAGPVGD-DLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILR-------------DQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRK 144
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.267e-16 Identity = 45/151 (29.80%), Postives = 75/151 (49.67%), Query Frame = -1 Query: 412 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 864 K+LKDL K+P SAG V E ++F W +I+GP ++ Y GG F + FP +YP PP V F ++++HPN+ +G +C+ IL E+W+P T+ PN + P + A ++ + +++ +K Sbjct: 8 KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQK 144
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.572e-16 Identity = 42/143 (29.37%), Postives = 73/143 (51.05%), Query Frame = -1 Query: 436 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKK 864 K+L DL ++P SAG V + ++F W +I+GP D+ Y+GG F + FP +YP PP V FT+ ++HPN+ + +C+ IL +W+P T+ PN + P + A+ ++ +D++ + Sbjct: 8 KELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15 Identity = 40/125 (32.00%), Postives = 65/125 (52.00%), Query Frame = -1 Query: 424 NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSR 798 N+F W +I G DT++EGG + M F D++P +PP +F ++HPNVYP G VC+S+L D W P +++ PN E PA +A + + + + E++K+V + Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15 Identity = 41/151 (27.15%), Postives = 76/151 (50.33%), Query Frame = -1 Query: 412 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 864 K+L DL ++P SAG V + +++ W SI+GPPD+ Y GG F + FP +YP+ PP + T++++HPN+ +G +C+ IL ++W+P T+ N + P + A +++ + +++ +K Sbjct: 8 KELSDLGRDPPSSCSAGPVGD-DLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDIL-------------KDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKEWTKK 144
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.118e-15 Identity = 46/143 (32.17%), Postives = 72/143 (50.35%), Query Frame = -1 Query: 436 KQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKK 864 K+L +L G SA D N+F+W +I GP +T+Y G + + FP++YP + P V+F + +HPNV G +C+ IL ++W+ ++ V PN+ESP N AA W ++K E+KK Sbjct: 39 KELMNLMMANERGISA-FPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDIL-------------KDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQK-EYKK 166
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.766e-15 Identity = 43/129 (33.33%), Postives = 62/129 (48.06%), Query Frame = -1 Query: 412 NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 798 N+ W +I G T +EGG F M F D+YP SPP +F ++HPNVYP G VC+SIL D W P T++ PN + PA +A + + + E++K+V +K Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKK 154
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.766e-15 Identity = 43/129 (33.33%), Postives = 62/129 (48.06%), Query Frame = -1 Query: 412 NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 798 N+ W +I G T +EGG F M F D+YP SPP +F ++HPNVYP G VC+SIL D W P T++ PN + PA +A + + + E++K+V +K Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKK 154
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.766e-15 Identity = 43/129 (33.33%), Postives = 62/129 (48.06%), Query Frame = -1 Query: 412 NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 798 N+ W +I G T +EGG F M F D+YP SPP +F ++HPNVYP G VC+SIL D W P T++ PN + PA +A + + + E++K+V +K Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKK 154
BLAST of CB290737 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.766e-15 Identity = 43/129 (33.33%), Postives = 62/129 (48.06%), Query Frame = -1 Query: 412 NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 798 N+ W +I G T +EGG F M F D+YP SPP +F ++HPNVYP G VC+SIL D W P T++ PN + PA +A + + + E++K+V +K Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKK 154 The following BLAST results are available for this feature:
BLAST of CB290737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290737 ID=CB290737; Name=CB290737; organism=Citrus sinensis; type=EST; length=867bpback to top |