CB290756

Overview
NameCB290756
Unique NameCB290756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AK1CL_MOUSE (Aldo-keto reductase family 1 member C21 OS=Mus musculus GN=Akr1c21 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.939e-22
Identity = 70/202 (34.65%), Postives = 106/202 (52.48%), Query Frame = 1
Query:  193 VLNTGAKIPAIGLGT---WQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNR--LKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            +LN G  IP +G GT    +       E  K A+  G+ + D A +Y  E  VGEA+  +   G+++RED+F TS ++C+      +   +  SL+ L   Y+DLYL+H+P   A   G+   P  + G   +   +R  L   W+AME   D+GL ++IGVSNF   Q++ +L     K  P  NQVE HP+  Q +L+ F
Sbjct:    9 ILNDGNFIPVLGFGTALPLECPKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYP--MALKPGEENFPVDEHG---KLIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPYLNQMKLLDF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: YOF5_CAEEL (Uncharacterized oxidoreductase ZK1290.5 OS=Caenorhabditis elegans GN=ZK1290.5 PE=2 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 2.532e-22
Identity = 65/194 (33.51%), Postives = 107/194 (55.15%), Query Frame = 1
Query:  193 VLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVKF 774
            VL+   ++P IGLGT  +GG      + +    GYR ID A  YG E ++G A+      S+ RE++FL++ L+  ++  +++ N  + S + L   YLD+Y++H P+            P    +++       +K W+ ME L +   VR+IGVSN+ +  + ELL+FA I+P  NQVELHP++ Q +L  +
Sbjct:    6 VLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKNC---SVPREEMFLSTKLW-PVDCGDEVYNAFQTSCEKLQTDYLDMYMIHMPQL-----------PDWIVNQKET----KEKTWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQVELHPWFHQADLKNY 180          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y4205_MYCGI (Uncharacterized oxidoreductase Mflv_4205 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_4205 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.641e-22
Identity = 65/190 (34.21%), Postives = 94/190 (49.47%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDEL 765
            LN    +P IGLG  +       +AV  AL  GYR ID A  YGNE  VG A+  +    + R+++F+T+ L          ++ +R SL+ LG+ Y+DLYL+HWP    S  G   D                  +W  +    + GL R+IGV+NF    + +++  +   PAVNQ+ELHP   Q EL
Sbjct:   12 LNDDNTMPVIGLGVGELSDAETEQAVTAALEAGYRLIDTAAAYGNEAAVGRAIAAS---GVPRDELFVTTKLATEDAGFQSSQDALRASLERLGLDYVDLYLIHWP---VSQQGKHVD------------------SWGGLMKSKEVGLTRSIGVANFHGHHLDDIISLSFFTPAVNQIELHPLLNQAEL 177          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y4483_MYCA1 (Uncharacterized oxidoreductase MAV_4483 OS=Mycobacterium avium (strain 104) GN=MAV_4483 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.368e-22
Identity = 69/193 (35.75%), Postives = 98/193 (50.78%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDS---GLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDEL 765
            LN  AK+P +GLG  +   E    +V  AL  G R ID A  YGNE  VG A+  +    + RE++F+T+ L  S    +  +   + SL  LG+ YLDLYL+HWP                          +L K  ++ EG++++   G VR+IGVSNF    +  +++    +PAVNQVELHP   Q EL
Sbjct:   19 LNDEAKMPVLGLGVAKLSDEETESSVLAALEAGCRLIDTAASYGNEAAVGRAIAAS---GIPREELFVTTKLGTSRQGFHSAQESCKESLDRLGLDYLDLYLIHWP------------------------APKLGKYVESFEGMIEARERGHVRSIGVSNFTEDLLATVIEETDEVPAVNQVELHPRLNQAEL 184          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y1744_MYCMM (Uncharacterized oxidoreductase MMAR_1744 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1744 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.623e-22
Identity = 65/200 (32.50%), Postives = 94/200 (47.00%), Query Frame = 1
Query:  172 SPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVK 771
            SP +    LN    +P +G+G      +    AV  AL +G R ID A  YGNE  VG A+  +    + R ++F+T+ +  + +         + SL  LG+ Y+DLYL+HWP  +A  + DA     ++  E                     G  R+IGVSNF    +  ++    + PAVNQVELHP   QDEL K
Sbjct:    6 SPSAPSIALNDENTMPVLGMGVAGLSDDETERAVSAALEIGCRLIDTAAAYGNEAAVGRAIAAS---GIPRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPAPAAGKYVDAFGGLIQARGE---------------------GFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVELHPLLNQDELRK 181          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y1987_MYCUA (Uncharacterized oxidoreductase MUL_1987 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_1987 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.641e-21
Identity = 65/200 (32.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  172 SPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVK 771
            SP +    LN    +P +G+G      +    AV  AL +G R ID A  YGNE  VG AL  +    + R ++F+T+ +  + +         + SL  LG+ Y+DLYL+HWP  +   + DA     ++  E                     G  R+IGVSNF    +  ++    + PAVNQVELHP   QDEL K
Sbjct:    7 SPSAPSIALNDENTMPVLGMGVAGLSDDETERAVSAALEIGCRLIDTAAAYGNEAAVGRALAAS---GIPRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPAPAVGKYVDAFGGLIQARGE---------------------GFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVELHPLLNQDELRK 182          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y4149_MYCPA (Uncharacterized oxidoreductase MAP_4149 OS=Mycobacterium paratuberculosis GN=MAP_4149 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.800e-21
Identity = 69/193 (35.75%), Postives = 97/193 (50.26%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDS---GLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDEL 765
            LN  AK P +GLG  +   E    +V  AL  G R ID A  YGNE  VG A+  +    + RE++F+T+ L  S    +  +   + SL  LG+ YLDLYL+HWP  +                        L K  ++ EG++++   G VR+IGVSNF    +  +++    +PAVNQVELHP   Q EL
Sbjct:   19 LNDEAKKPVLGLGVAKLSDEETESSVLAALEAGCRLIDTAASYGNEAAVGRAIAAS---GIPREELFVTTKLGTSRQGFHSAQESCKESLDRLGLDYLDLYLIHWPAPT------------------------LGKYVESFEGMIEARERGHVRSIGVSNFTEDLLATVIEETNEVPAVNQVELHPRLNQAEL 184          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: DKGB_CORSS (2,5-diketo-D-gluconic acid reductase B OS=Corynebacterium sp. (strain SHS752001) GN=dkgB PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.390e-20
Identity = 66/193 (34.20%), Postives = 96/193 (49.74%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVKF 774
            LN G      GLGT+   G+  V A+  A+  GYR +D A  Y NE EVG A+  +   S+ R+++ + S +    +   +  + +R SL  LG+  +DL L+HWP  S   + D                      W+ M    ++GLVR+IGVSNF    +K L+    + PAVNQVELHP++ Q  L  F
Sbjct:    9 LNDGRPFAEPGLGTYNLRGDEGVAAMVAAIDSGYRLLDTAVNYENESEVGRAVRAS---SVDRDELIVASKIPGRQHGRAEAVDSIRGSLDRLGLDVIDLQLIHWPNPSVGRWLDT---------------------WRGMIDAREAGLVRSIGVSNFTEPMLKTLIDETGVTPAVNQVELHPYFPQAALRAF 177          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLE (Uncharacterized oxidoreductase ML1669 OS=Mycobacterium leprae GN=ML1669 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.007e-20
Identity = 63/192 (32.81%), Postives = 88/192 (45.83%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVK 771
            LN    +P +GLG  +   +    AV  AL +G R ID A  YGNE  V  A+  +    + R  +F+T+ L        K ++    SL  LG+ Y+DLYL+HWP            PP          + +   AW  M      G  R+IGV NF    +  ++    + PAVNQ+ELHP   QDE+ K
Sbjct:   15 LNDENTMPLLGLGVAELSEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAAS---GIPRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPA-----------PP----------VGQYVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRK 182          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLB (Uncharacterized oxidoreductase MLBr01669 OS=Mycobacterium leprae (strain Br4923) GN=MLBr01669 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.007e-20
Identity = 63/192 (32.81%), Postives = 88/192 (45.83%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVK 771
            LN    +P +GLG  +   +    AV  AL +G R ID A  YGNE  V  A+  +    + R  +F+T+ L        K ++    SL  LG+ Y+DLYL+HWP            PP          + +   AW  M      G  R+IGV NF    +  ++    + PAVNQ+ELHP   QDE+ K
Sbjct:   15 LNDENTMPLLGLGVAELSEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAAS---GIPRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPA-----------PP----------VGQYVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRK 182          
The following BLAST results are available for this feature:
BLAST of CB290756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
AK1CL_MOUSE1.939e-2234.65Aldo-keto reductase family 1 member C21 OS=Mus mus... [more]
YOF5_CAEEL2.532e-2233.51Uncharacterized oxidoreductase ZK1290.5 OS=Caenorh... [more]
Y4205_MYCGI5.641e-2234.21Uncharacterized oxidoreductase Mflv_4205 OS=Mycoba... [more]
Y4483_MYCA17.368e-2235.75Uncharacterized oxidoreductase MAV_4483 OS=Mycobac... [more]
Y1744_MYCMM9.623e-2232.50Uncharacterized oxidoreductase MMAR_1744 OS=Mycoba... [more]
Y1987_MYCUA1.641e-2132.50Uncharacterized oxidoreductase MUL_1987 OS=Mycobac... [more]
Y4149_MYCPA2.800e-2135.75Uncharacterized oxidoreductase MAP_4149 OS=Mycobac... [more]
DKGB_CORSS1.390e-2034.202,5-diketo-D-gluconic acid reductase B OS=Coryneba... [more]
Y1669_MYCLE9.007e-2032.81Uncharacterized oxidoreductase ML1669 OS=Mycobacte... [more]
Y1669_MYCLB9.007e-2032.81Uncharacterized oxidoreductase MLBr01669 OS=Mycoba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dd05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dd05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290756 ID=CB290756; Name=CB290756; organism=Citrus sinensis; type=EST; length=775bp
GCACGTGGGACAAACACTTGGCCTGCACTTTTTAATACTGTCAAAAGCTT
TGAAGTGAAAAAAAAAATGCAAACTCTCGTCTGGGTTTTGTGATTTTTGG
TTTGATTTGGTATCTGTGTTTTTGATCTTTTTTTCTTTTTGTTCATTTGG
GAAATGAAAGGGAGATTTGCTAGTCCAGGGAGTAGTTACTTTGTGTTGAA
CACAGGAGCTAAAATTCCAGCCATTGGATTGGGAACATGGCAAACTGGGG
GAGAGCTTTGTGTTGAGGCTGTGAAAACAGCATTGTCAGTGGGTTACCGT
AATATAGATTGTGCTCATCTTTATGGGAATGAGATTGAAGTTGGGGAAGC
ACTTGATGAAGCTTTCAAAGGATCTCTCAAGAGAGAGGATGTGTTCCTGA
CCTCAACTCTCTATTGTAGTATGAATTCAATCAATAAGATTGAAAATTAC
GTCAGAGTGTCTCTTAAGAATCTTGGAGTTTCATATTTGGATCTCTATTT
AATGCATTGGCCTGAGTGCTCTGCTTCTGGTTTTGGGGATGCTACTGATC
CTCCTTCTAAGTCCGGGAGTGAGCGTAGGCAGTTTTTAAATCGCTTGAAG
AAAGCATGGAAAGCCATGGAAGGTCTCGTGGACTCGGGATTGGTCAGAGC
TATTGGTGTCAGTAATTTTGGGGTTTCACAGATCAAAGAGTTGCTTAAAT
TTGCCAAAATTATGCCTGCGGTGAATCAGGTGGAGTTGCATCCTTTTTGG
AGGCAGGATGAACTAGTAAAATTCT
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