CB290756

Overview
NameCB290756
Unique NameCB290756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: YEAE_ECOLI (Uncharacterized protein yeaE OS=Escherichia coli (strain K12) GN=yeaE PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.430e-11
Identity = 61/185 (32.97%), Postives = 80/185 (43.24%), Query Frame = 1
Query:  214 IPAIGLGTWQTGGELC-----VEAVKTALSVGYRNIDCAHLY---GNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKF-AKIMPAVNQVELH 741
            +PA+G GTW  G +       V A++  + +G   ID A +Y   G E  VGEAL         RE VFL S +Y       K  N    SL+ L   YLDLYL+HW                 SGS         ++   AME L+  G +R  GVSN   + ++EL +       A NQV  H
Sbjct:   14 LPAVGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGL------REKVFLVSKVYPWNAGGQKAINACEASLRRLNTDYLDLYLLHW-----------------SGS------FAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCATNQVLYH 169          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: YHH5_SCHPO (Uncharacterized oxidoreductase C28F2.05 OS=Schizosaccharomyces pombe GN=SPBC28F2.05c PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11
Identity = 47/165 (28.48%), Postives = 76/165 (46.06%), Query Frame = 1
Query:  259 CVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS--LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPF 747
            C + V  ALS+G R ID A  Y NE E  +A+ +    +  +KRED+ L + +  S+    +    V  SL+  G   LD+ L+H P+                         R  ++W+A+      G +  IGVSN+ +  ++E++     +PA+NQVE   F
Sbjct:   26 CYQQVIEALSLGIRVIDSAITYRNEKECEQAIQDFCHQNVNIKREDITLITKIPDSLQGFERTWKAVEQSLRRTGRPKLDVVLIHSPKWPV----------------------RRIESWRALLQHQKEGRINKIGVSNYNIHHLEEIISLGLPLPAINQVEFSAF 168          
The following BLAST results are available for this feature:
BLAST of CB290756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
YEAE_ECOLI3.430e-1132.97Uncharacterized protein yeaE OS=Escherichia coli (... [more]
YHH5_SCHPO7.642e-1128.48Uncharacterized oxidoreductase C28F2.05 OS=Schizos... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dd05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dd05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290756 ID=CB290756; Name=CB290756; organism=Citrus sinensis; type=EST; length=775bp
GCACGTGGGACAAACACTTGGCCTGCACTTTTTAATACTGTCAAAAGCTT
TGAAGTGAAAAAAAAAATGCAAACTCTCGTCTGGGTTTTGTGATTTTTGG
TTTGATTTGGTATCTGTGTTTTTGATCTTTTTTTCTTTTTGTTCATTTGG
GAAATGAAAGGGAGATTTGCTAGTCCAGGGAGTAGTTACTTTGTGTTGAA
CACAGGAGCTAAAATTCCAGCCATTGGATTGGGAACATGGCAAACTGGGG
GAGAGCTTTGTGTTGAGGCTGTGAAAACAGCATTGTCAGTGGGTTACCGT
AATATAGATTGTGCTCATCTTTATGGGAATGAGATTGAAGTTGGGGAAGC
ACTTGATGAAGCTTTCAAAGGATCTCTCAAGAGAGAGGATGTGTTCCTGA
CCTCAACTCTCTATTGTAGTATGAATTCAATCAATAAGATTGAAAATTAC
GTCAGAGTGTCTCTTAAGAATCTTGGAGTTTCATATTTGGATCTCTATTT
AATGCATTGGCCTGAGTGCTCTGCTTCTGGTTTTGGGGATGCTACTGATC
CTCCTTCTAAGTCCGGGAGTGAGCGTAGGCAGTTTTTAAATCGCTTGAAG
AAAGCATGGAAAGCCATGGAAGGTCTCGTGGACTCGGGATTGGTCAGAGC
TATTGGTGTCAGTAATTTTGGGGTTTCACAGATCAAAGAGTTGCTTAAAT
TTGCCAAAATTATGCCTGCGGTGAATCAGGTGGAGTTGCATCCTTTTTGG
AGGCAGGATGAACTAGTAAAATTCT
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