CB290756

Overview
NameCB290756
Unique NameCB290756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: XYL1_CANTR (NAD(P)H-dependent D-xylose reductase I,II OS=Candida tropicalis GN=xyrA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.223e-29
Identity = 69/197 (35.03%), Postives = 115/197 (58.38%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNR---LKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVKF 774
            LN+G ++P +G G W+       + +  A+  GYR  D A  YGNE EVGE ++ A K G +KRE++F+TS L+ + +    +E  +  +L +L + Y+DL+L+H+P        +   PP     +   F      L   WKA+E LV++G +++IG+SNF  + I +L++ A I PAV Q+E HP+ +Q +L+++
Sbjct:   12 LNSGYEMPLVGFGCWKVTNATAADQIYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLVKREELFITSKLWNNFHDPKNVETALNKTLSDLNLDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFHYEDVPLLDTWKALEKLVEAGKIKSIGISNFTGALIYDLIRGATIKPAVLQIEHHPYLQQPKLIEY 208          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 77/206 (37.38%), Postives = 118/206 (57.28%), Query Frame = 1
Query:  175 PGSSYFVLNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            P S    LN G  IP +G GT+   +      +EA K A+ VG+R++D AHLY NE +VG+A+  +   G++KRED+F TS L+C+      +   +  SL+NL + Y+DLY++H P       G+   P  +SG      ++ L   W+A+E   D+GL ++IGVSNF   Q++++L     K  P  NQVE HP+  Q +L++F
Sbjct:    3 PKSQRVKLNDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKP--GNKFVPKDESGKLIFDSVD-LCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYLNQSKLLEF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 76/189 (40.21%), Postives = 104/189 (55.03%), Query Frame = 1
Query:  214 IPAIGLGTWQ---TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSL--KREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDEL 765
            +P IG+GT     T  E    A+  A+ +GYR+ D A LY  E  V EA+ EA +  L   R DVF+TS L+CS     ++    R +L+NLG+ Y+DL L+HWP   A G  D   P      E       ++  W+ ME     GL RAIGVSNF   ++++LL FA + PA NQVE++P W+Q  L
Sbjct:   18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPATVAPGSYDFPFP-----KEEMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMNPMWQQRTL 201          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: ARA1_YEAST (D-arabinose dehydrogenase [NAD(P)+] heavy chain OS=Saccharomyces cerevisiae GN=ARA1 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 83/212 (39.15%), Postives = 118/212 (55.66%), Query Frame = 1
Query:  187 YFVLNTGAKIPAIGLGTWQTGGELCV--EAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLK----------KAWKAMEGLV---DSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVKF 774
            YF LN G +IPA+GLGT     +L    +AVK A+  GYR+ID A  Y  E  VGEA+ E  + GS+KRED+F+T+ ++  +   ++++  +  SLK LG+ Y+DL L HWP C    F    DP   SG  +    +  K          + +K +E +    +   VRAIGVSNF +  ++ L+K  ++ P VNQVE HP   Q EL KF
Sbjct:   24 YFSLNNGVRIPALGLGTANPHEKLAETKQAVKAAIKAGYRHIDTAWAYETEPFVGEAIKELLEDGSIKREDLFITTKVWPVL--WDEVDRSLNESLKALGLEYVDLLLQHWPLC----FEKIKDPKGISGLVKTPVDDSGKTMYAADGDYLETYKQLEKIYLDPNDHRVRAIGVSNFSIEYLERLIKECRVKPTVNQVETHPHLPQMELRKF 229          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AK1CN_HORSE (Aldo-keto reductase family 1 member C23 OS=Equus caballus GN=AKR1C23 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 79/199 (39.70%), Postives = 115/199 (57.79%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            LN G  I A+G GT+   +      VEA K+A+  G+R+IDCAHLY NE EVG A+    + G++KRED+F TS L+ +   +  +   +  SLKNL + Y+DLY++H+P   A   G+   P  + G      ++ L   W+AME   D+GL ++IGVSNF   Q++ +L     K  P  NQVE HP+  Q +L+ F
Sbjct:   10 LNDGHFIHALGFGTYAPNEVPKSKAVEATKSAIDAGFRHIDCAHLYDNEKEVGLAIRSKIQDGTVKREDIFCTSKLWATSLRLQLVRPALEKSLKNLQLDYVDLYIIHFP--VAVKPGEEHLPQDEQGRMIFDTVD-LCATWEAMEKCKDAGLTKSIGVSNFNRRQLEMILNKPGLKHKPVCNQVECHPYLNQSKLLDF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: XYL1_CANTE (NAD(P)H-dependent D-xylose reductase OS=Candida tenuis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.811e-28
Identity = 73/197 (37.06%), Postives = 115/197 (58.38%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNR---LKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVKF 774
            L++G  +P+IG G W+       E V  A+  GYR  D A  YGNE EVG+ +  A  +G +KRE++FLTS L+ + +    +E  +  +L +L V Y+DL+L+H+P        +   PP     +   F+     + + WKA+E LV +G +++IGVSNF  + + +LL+ A I PAV QVE HP+ +Q +L++F
Sbjct:   10 LSSGHLMPSIGFGCWKLANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEF 206          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AK1C1_HUMAN (Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.811e-28
Identity = 76/199 (38.19%), Postives = 115/199 (57.79%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            LN G  +P +G GT+   +      +EA K A+  G+R+ID AHLY NE +VG A+  +   GS+KRED+F TS L+C+ +    +   +  SLKNL + Y+DLYL+H+P       G+   P  ++G      ++ L   W+A+E   D+GL ++IGVSNF   Q++ +L     K  P  NQVE HP++ Q +L+ F
Sbjct:   10 LNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKP--GEEVIPKDENGKILFDTVD-LCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AKC1H_RAT (Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus GN=Akr1c18 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.088e-28
Identity = 75/199 (37.69%), Postives = 116/199 (58.29%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQTGGEL---CVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            LN G  IP +G GT+ T   L    +E+ K A+ VG+R+IDC+HLY NE E+G+A+    + G++KRED+F TS L+ + +    +   +  SL+ L + Y+DLYL+H+P       GD   P  + G+     ++ L   W+AME   D+GL ++IGVSNF   Q++++L     K  P  NQVE H +  Q +L+ +
Sbjct:   10 LNDGHSIPVLGFGTYATEENLRKKSMESTKIAIDVGFRHIDCSHLYQNEEEIGQAIVSKIEDGTVKREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKP--GDELLPQDEHGNLILDTVD-LCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKILNKPGLKHRPVCNQVECHLYLNQSKLLAY 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AK1C1_PONAB (Aldo-keto reductase family 1 member C1 homolog OS=Pongo abelii GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.088e-28
Identity = 76/199 (38.19%), Postives = 114/199 (57.29%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            LN    +P +G GT+   +      +EA K A+  G+R+ID AHLY NE +VG A+  +   GS+KRED+F TS L+C+ +    +   +  SLKNL + Y+DLYL+H+P       G+   P  ++G      ++ L   W+AME   D+GL ++IGVSNF   Q++ +L     K  P  NQVE HP++ Q +L+ F
Sbjct:   10 LNDSHFMPVLGFGTYAPPEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLVHFPVSVKP--GEEVIPKDENGKILFDTVD-LCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.033e-28
Identity = 77/195 (39.49%), Postives = 98/195 (50.26%), Query Frame = 1
Query:  181 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDEL 765
            S    LN G  IP +GLG WQT  E    AV  AL  GYR+ID A  Y NE E G A+  +    + RED+FL + L+ S    +        S++ LGV YLDLYL+HWP    + F D                      +KA   L D G +R+IGVSNF    +  L++   I+PAVNQ+ELHP   Q EL
Sbjct:    2 SPRITLNDGNSIPQVGLGVWQTPAEDTERAVAAALQAGYRHIDTAAAYRNETETGRAIANS---GVPREDIFLVTKLWNSDQGYDATLAAFDASVQRLGVDYLDLYLIHWPVPENNKFVD---------------------TFKAFAHLRDQGRIRSIGVSNFEPEHLTTLIEETGIVPAVNQIELHPLLPQQEL 172          
The following BLAST results are available for this feature:
BLAST of CB290756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
XYL1_CANTR6.223e-2935.03NAD(P)H-dependent D-xylose reductase I,II OS=Candi... [more]
PGFS1_BOVIN1.386e-2837.38Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
NADO2_ORYSJ1.386e-2840.21Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
ARA1_YEAST1.386e-2839.15D-arabinose dehydrogenase [NAD(P)+] heavy chain OS... [more]
AK1CN_HORSE1.386e-2839.70Aldo-keto reductase family 1 member C23 OS=Equus c... [more]
XYL1_CANTE1.811e-2837.06NAD(P)H-dependent D-xylose reductase OS=Candida te... [more]
AK1C1_HUMAN1.811e-2838.19Aldo-keto reductase family 1 member C1 OS=Homo sap... [more]
AKC1H_RAT3.088e-2837.69Aldo-keto reductase family 1 member C18 OS=Rattus ... [more]
AK1C1_PONAB3.088e-2838.19Aldo-keto reductase family 1 member C1 homolog OS=... [more]
Y2408_MYCS24.033e-2839.49Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01dd05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dd05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290756 ID=CB290756; Name=CB290756; organism=Citrus sinensis; type=EST; length=775bp
GCACGTGGGACAAACACTTGGCCTGCACTTTTTAATACTGTCAAAAGCTT
TGAAGTGAAAAAAAAAATGCAAACTCTCGTCTGGGTTTTGTGATTTTTGG
TTTGATTTGGTATCTGTGTTTTTGATCTTTTTTTCTTTTTGTTCATTTGG
GAAATGAAAGGGAGATTTGCTAGTCCAGGGAGTAGTTACTTTGTGTTGAA
CACAGGAGCTAAAATTCCAGCCATTGGATTGGGAACATGGCAAACTGGGG
GAGAGCTTTGTGTTGAGGCTGTGAAAACAGCATTGTCAGTGGGTTACCGT
AATATAGATTGTGCTCATCTTTATGGGAATGAGATTGAAGTTGGGGAAGC
ACTTGATGAAGCTTTCAAAGGATCTCTCAAGAGAGAGGATGTGTTCCTGA
CCTCAACTCTCTATTGTAGTATGAATTCAATCAATAAGATTGAAAATTAC
GTCAGAGTGTCTCTTAAGAATCTTGGAGTTTCATATTTGGATCTCTATTT
AATGCATTGGCCTGAGTGCTCTGCTTCTGGTTTTGGGGATGCTACTGATC
CTCCTTCTAAGTCCGGGAGTGAGCGTAGGCAGTTTTTAAATCGCTTGAAG
AAAGCATGGAAAGCCATGGAAGGTCTCGTGGACTCGGGATTGGTCAGAGC
TATTGGTGTCAGTAATTTTGGGGTTTCACAGATCAAAGAGTTGCTTAAAT
TTGCCAAAATTATGCCTGCGGTGAATCAGGTGGAGTTGCATCCTTTTTGG
AGGCAGGATGAACTAGTAAAATTCT
back to top