CB290756

Overview
NameCB290756
Unique NameCB290756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: PGFS2_BOVIN (Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.033e-28
Identity = 76/206 (36.89%), Postives = 117/206 (56.80%), Query Frame = 1
Query:  175 PGSSYFVLNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            P S     N G  IP +G GT+   +      +EA K A+ VG+R++D AHLY NE +VG+A+  +   G++KRED+F TS L+C+      +   +  SL+NL + Y+DLY++H P       G+   P  +SG      ++ L   W+A+E   D+GL ++IGVSNF   Q++++L     K  P  NQVE HP+  Q +L++F
Sbjct:    3 PKSQRVKFNDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKP--GNKFVPKDESGKLIFDSVD-LCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYLNQSKLLEF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: XYL1_PICST (NAD(P)H-dependent D-xylose reductase OS=Pichia stipitis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.880e-28
Identity = 73/197 (37.06%), Postives = 114/197 (57.87%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNR---LKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVKF 774
            LN+G  +PA+G G W+   + C E +  A+  GYR  D A  Y NE  VG  + +A  +G +KRED+FLTS L+ + +  + +E  +  +L +L V Y+DL+L+H+P        +   PP     +   F      + + WKA+E LV +G +R+IGVSNF  + + +LL+ A I P+V QVE HP+ +Q  L++F
Sbjct:    6 LNSGYDMPAVGFGCWKVDVDTCSEQIYRAIKTGYRLFDGAEDYANEKLVGAGVKKAIDEGIVKREDLFLTSKLWNNYHHPDNVEKALNRTLSDLQVDYVDLFLIHFPVTFKFVPLEEKYPPGFYCGKGDNFDYEDVPILETWKALEKLVKAGKIRSIGVSNFPGALLLDLLRGATIKPSVLQVEHHPYLQQPRLIEF 202          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AK1C4_HUMAN (Aldo-keto reductase family 1 member C4 OS=Homo sapiens GN=AKR1C4 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 6.880e-28
Identity = 75/199 (37.69%), Postives = 112/199 (56.28%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            LN G  +P +G GT+   +      VE  K A+  G+R+ID A+LY NE +VG A+  +   GS+KRED+F TS L+C+      ++  +  SLK L + Y+DLYL+H+P   A   G+   P  ++G      ++ L   W+ ME   D+GL ++IGVSNF   Q++ +L     K  P  NQVE HP+  Q +L+ F
Sbjct:   10 LNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFP--MALKPGETPLPKDENGKVIFDTVD-LSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: P100_LEIMA (Probable reductase OS=Leishmania major GN=P100/11E PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 8.986e-28
Identity = 77/194 (39.69%), Postives = 105/194 (54.12%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQT-GGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVKF 774
            L+ G K+P  GLG WQ+  GE+   AV  AL  GYR+ID A +Y NE  VG  L  +    + REDVF+T+ L+ +             S + LGV Y+DLYL+HWP           D  SK G   +++L+    +W+A E L     VRAIGVSNF +  ++++L    + P VNQVELHP   Q +L  F
Sbjct:   11 LSNGVKMPQFGLGVWQSPAGEVTENAVNWALCAGYRHIDTAAIYKNEESVGAGLRAS---GVPREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWPR--------GKDILSKEG---KKYLD----SWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQADLRAF 186          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFU (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fuscata fuscata GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.986e-28
Identity = 76/199 (38.19%), Postives = 113/199 (56.78%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            LN G  +P +G GT+   +      +EA K A+  G+R+ID AHLY NE  VG A+  +   G++KRED+F TS L+C+ +    +   +  SLKNL + Y+DLYL+H+P       G+   P  ++G      ++ L   W+AME   D+GL ++IGVSNF   Q++ +L     K  P  NQVE HP+  Q +L+ F
Sbjct:   10 LNDGHFMPVLGFGTYAPAEVPKNKAIEATKLAIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVKREDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKP--GEELIPKDENGKLLFDTVD-LCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQRKLLDF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFA (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fascicularis GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.533e-27
Identity = 76/199 (38.19%), Postives = 113/199 (56.78%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            LN G  +P +G GT+   +      +EA K A+  G+R+ID AHLY NE  VG A+  +   G++KRED+F TS L+C+ +    +   +  SLKNL + Y+DLYL+H+P       G+   P  ++G      ++ L   W+AME   D+GL ++IGVSNF   Q++ +L     K  P  NQVE HP+  Q +L+ F
Sbjct:   10 LNDGHFMPVLGFGTYAPAEVPKNKALEATKLAIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVKREDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKP--GEELIPKDENGKLLFDTVD-LCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQRKLLDF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFA (Aldo-keto reductase family 1 member C4 OS=Macaca fascicularis GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.002e-27
Identity = 76/199 (38.19%), Postives = 113/199 (56.78%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            LN G  +P +G GT+   +      VE  K A+  G+R+ID A+LY NE +VG A+  +   GS+KRED+F TS L+C+      ++  +  SLK L + Y+DLYL+H+P   A   G+   P  ++G      ++ L   W+AME   D+GL ++IGVSNF   Q++ +L     K  P  NQVE HP+  Q +L+ F
Sbjct:   10 LNDGHFMPVLGFGTYAPPEVPRNRVVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFP--MALKPGETPLPKDENGKVMFDTVD-LCAIWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNNPGLKYKPVCNQVECHPYLNQSKLLDF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.460e-27
Identity = 75/196 (38.27%), Postives = 99/196 (50.51%), Query Frame = 1
Query:  178 GSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDEL 765
            G+    LN G  IP +GLG WQT  E    AV  AL+ GYR++D A  YGNE + G A+ ++    L R  V+L + L+ S    +        S+  LGV YLDLYL+HWP             P K         N     +KA   L + G +R+IGVSNF    ++ L+    I+PAVNQ+ELHP   Q EL
Sbjct:    2 GAPLVALNDGNSIPQVGLGVWQTPPEDTERAVAAALAAGYRHVDTAAAYGNEEQTGRAIAQS---GLDRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWP------------VPEK---------NLFVDTFKAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQREL 173          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: DDBX_BOVIN (Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.460e-27
Identity = 73/199 (36.68%), Postives = 115/199 (57.79%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            LN G  IP +G GT+   +      +E  K A+  G+R+ID AHLY NE +VG+A+  +   G++KRED+F TS L+ +      +   +  SL NL + Y+DLY++H+P   A   G+   P  ++G      ++ L + W+A+E   D+GL ++IGVSNF   Q++++L     K  P  NQVE HP++ Q +L+ F
Sbjct:   10 LNDGHFIPVLGFGTFAPREVPKSEALEVTKFAIEAGFRHIDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWSTSLRPELVRPALEKSLNNLQLDYVDLYIIHFP--VALKPGETLFPTDENGKPIFDSVD-LCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYFNQSKLLDF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.824e-27
Identity = 74/194 (38.14%), Postives = 105/194 (54.12%), Query Frame = 1
Query:  214 IPAIGLGTWQ---TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSL--KREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDP-----PSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDEL 765
            +P +G+GT     T  E    A+  A+ +GYR+ D A +Y  E  VGEA+ EA +  L   R DVF+TS ++CS     ++    R +L+NLG+ Y+DL L+HWP     G  D   P     PS            ++  W+ ME     GL RAIGVSNF   ++++LL  A + PAVNQVE++P W+Q  L
Sbjct:   16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPVSLTPGNYDFPFPKEVILPSFD----------MEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSLAAVRPAVNQVEVNPMWQQRTL 199          
The following BLAST results are available for this feature:
BLAST of CB290756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
PGFS2_BOVIN4.033e-2836.89Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1[more]
XYL1_PICST6.880e-2837.06NAD(P)H-dependent D-xylose reductase OS=Pichia sti... [more]
AK1C4_HUMAN6.880e-2837.69Aldo-keto reductase family 1 member C4 OS=Homo sap... [more]
P100_LEIMA8.986e-2839.69Probable reductase OS=Leishmania major GN=P100/11E... [more]
AK1C1_MACFU8.986e-2838.19Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1C1_MACFA1.533e-2738.19Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1C4_MACFA2.002e-2738.19Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
Y1985_MYCSK4.460e-2738.27Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]
DDBX_BOVIN4.460e-2736.68Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=... [more]
NADO1_ORYSJ5.824e-2738.14Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dd05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dd05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290756 ID=CB290756; Name=CB290756; organism=Citrus sinensis; type=EST; length=775bp
GCACGTGGGACAAACACTTGGCCTGCACTTTTTAATACTGTCAAAAGCTT
TGAAGTGAAAAAAAAAATGCAAACTCTCGTCTGGGTTTTGTGATTTTTGG
TTTGATTTGGTATCTGTGTTTTTGATCTTTTTTTCTTTTTGTTCATTTGG
GAAATGAAAGGGAGATTTGCTAGTCCAGGGAGTAGTTACTTTGTGTTGAA
CACAGGAGCTAAAATTCCAGCCATTGGATTGGGAACATGGCAAACTGGGG
GAGAGCTTTGTGTTGAGGCTGTGAAAACAGCATTGTCAGTGGGTTACCGT
AATATAGATTGTGCTCATCTTTATGGGAATGAGATTGAAGTTGGGGAAGC
ACTTGATGAAGCTTTCAAAGGATCTCTCAAGAGAGAGGATGTGTTCCTGA
CCTCAACTCTCTATTGTAGTATGAATTCAATCAATAAGATTGAAAATTAC
GTCAGAGTGTCTCTTAAGAATCTTGGAGTTTCATATTTGGATCTCTATTT
AATGCATTGGCCTGAGTGCTCTGCTTCTGGTTTTGGGGATGCTACTGATC
CTCCTTCTAAGTCCGGGAGTGAGCGTAGGCAGTTTTTAAATCGCTTGAAG
AAAGCATGGAAAGCCATGGAAGGTCTCGTGGACTCGGGATTGGTCAGAGC
TATTGGTGTCAGTAATTTTGGGGTTTCACAGATCAAAGAGTTGCTTAAAT
TTGCCAAAATTATGCCTGCGGTGAATCAGGTGGAGTTGCATCCTTTTTGG
AGGCAGGATGAACTAGTAAAATTCT
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