CB290756

Overview
NameCB290756
Unique NameCB290756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AK1CO_HORSE (Aldo-keto reductase family 1 member C23-like protein OS=Equus caballus GN=PGFS PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.098e-25
Identity = 74/199 (37.19%), Postives = 110/199 (55.28%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            LN G  IP +G GT+   +      VE  K A+  G+R+ID A+ Y NE EVG+A+    + G++KRED+F TS L+ +      +   +  SL NL + Y+DLY++H+P   A   G+   P  + G      ++ L   W+AME   D+GL ++IGVSNF   Q++ +L     K  P  NQVE HP+  Q +L+ F
Sbjct:   10 LNDGHVIPVLGFGTYAPEEVPKSRTVEVTKLAIDAGFRHIDSAYSYNNEKEVGQAIRSKIEDGTVKREDIFYTSKLWLTFLRPELVRPALEKSLTNLQLDYVDLYIIHFP--IALKPGEELFPEDEHGKLIFDTVD-LCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDF 205          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: GR_BACSU (Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.196e-25
Identity = 72/191 (37.70%), Postives = 100/191 (52.36%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQT-GGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDEL 765
            L+ G ++P  GLG ++   G    E+VK A+  GYR+ID A +Y NE  VG  + E+    + RE++F+TS ++               SL+ L + YLDLYL+HWP                         ++ K  W+A+E L   G +RAIGVSNF V  ++ELLK A+I P VNQVE HP   Q EL
Sbjct:   11 LHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GVAREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPG-----------------------KDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKEL 175          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: 6DCS_SOYBN (NAD(P)H-dependent 6'-deoxychalcone synthase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.196e-25
Identity = 73/192 (38.02%), Postives = 110/192 (57.29%), Query Frame = 1
Query:  211 KIPAIGLGTWQ--TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASG-FGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVKF 774
            ++P +G+G+    T  +   EA+  A+  GYR+ D A  YG+E  +GEAL EA   G + R+D+F+TS L+ + N  + +   +R SLK L + YLDLYL+HWP  S  G F    +       +       +K  W++ME     GL +AIGVSNF V +++ LL  A I P V+QVE++  W+Q +L +F
Sbjct:   20 RMPVVGMGSAPDFTCKKDTKEAIIEAVKQGYRHFDTAAAYGSEQALGEALKEAIHLGLVSRQDLFVTSKLWVTENHPHLVLPALRKSLKTLQLEYLDLYLIHWPLSSQPGKFSFPIEVEDLLPFD-------VKGVWESMEECQKLGLTKAIGVSNFSVKKLQNLLSVATIRPVVDQVEMNLAWQQKKLREF 204          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.451e-25
Identity = 74/207 (35.75%), Postives = 118/207 (57.00%), Query Frame = 1
Query:  172 SPGSSYFVLNTGAKIPAIGLGTWQ----TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVK 771
            S  + +  LN G  IP IGLGT+       G+  + AVKTA+  GYR+ID A++Y NE EVGEA+ ++  +G +KRE++F    L+ + +    +   +  +L+ L + Y+DLY++  P   A   G+   P  ++G       N L   W+A+E   D+GLV+++GVSNF   Q++ +L     K  P  NQVE HP++ Q +L++
Sbjct:    4 STANHHIPLNDGNSIPIIGLGTYSDPRPVPGKTFI-AVKTAIDEGYRHIDGAYVYRNEHEVGEAIREKVAEGKVKREEIFYCGKLWSTDHDPEMVRPALERTLQTLKLDYIDLYIIEMP--MAFKPGEEFYPKDENGRVIYHKSN-LCATWEALEACKDAGLVKSLGVSNFNRRQLEVILNKPGLKYKPVTNQVECHPYFTQTKLLE 206          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y2999_MYCTA (Uncharacterized oxidoreductase MRA_2999 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_2999 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.120e-25
Identity = 71/206 (34.47%), Postives = 98/206 (47.57%), Query Frame = 1
Query:  154 MKGRFASPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVK 771
            M G   +  +    LN    +P +GLG  +   +    AV  AL +G R ID A+ YGNE  VG A+  +    + RE++F+T+ L        + +   R SL  LG+ Y+DLYL+HWP            PP          + +   AW  M      G  R+IGVSNF    I+ L+    + PAVNQ+ELHP   QDEL K
Sbjct:    1 MTGESGAAAAPSITLNDEHTMPVLGLGVAELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAAS---GVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPA-----------PP----------VGKYVDAWGGMIQSRGEGHARSIGVSNFTAENIENLIDLTFVTPAVNQIELHPLLNQDELRK 182          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y2996_MYCBO (Uncharacterized oxidoreductase Mb2996 OS=Mycobacterium bovis GN=Mb2996 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.120e-25
Identity = 71/206 (34.47%), Postives = 98/206 (47.57%), Query Frame = 1
Query:  154 MKGRFASPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVK 771
            M G   +  +    LN    +P +GLG  +   +    AV  AL +G R ID A+ YGNE  VG A+  +    + RE++F+T+ L        + +   R SL  LG+ Y+DLYL+HWP            PP          + +   AW  M      G  R+IGVSNF    I+ L+    + PAVNQ+ELHP   QDEL K
Sbjct:    1 MTGESGAAAAPSITLNDEHTMPVLGLGVAELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAAS---GVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPA-----------PP----------VGKYVDAWGGMIQSRGEGHARSIGVSNFTAEHIENLIDLTFVTPAVNQIELHPLLNQDELRK 182          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y2993_MYCBP (Uncharacterized oxidoreductase BCG_2993 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_2993 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.120e-25
Identity = 71/206 (34.47%), Postives = 98/206 (47.57%), Query Frame = 1
Query:  154 MKGRFASPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVK 771
            M G   +  +    LN    +P +GLG  +   +    AV  AL +G R ID A+ YGNE  VG A+  +    + RE++F+T+ L        + +   R SL  LG+ Y+DLYL+HWP            PP          + +   AW  M      G  R+IGVSNF    I+ L+    + PAVNQ+ELHP   QDEL K
Sbjct:    1 MTGESGAAAAPSITLNDEHTMPVLGLGVAELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAAS---GVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPA-----------PP----------VGKYVDAWGGMIQSRGEGHARSIGVSNFTAEHIENLIDLTFVTPAVNQIELHPLLNQDELRK 182          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: Y2971_MYCTU (Uncharacterized oxidoreductase Rv2971/MT3049 OS=Mycobacterium tuberculosis GN=Rv2971 PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 7.120e-25
Identity = 71/206 (34.47%), Postives = 98/206 (47.57%), Query Frame = 1
Query:  154 MKGRFASPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMPAVNQVELHPFWRQDELVK 771
            M G   +  +    LN    +P +GLG  +   +    AV  AL +G R ID A+ YGNE  VG A+  +    + RE++F+T+ L        + +   R SL  LG+ Y+DLYL+HWP            PP          + +   AW  M      G  R+IGVSNF    I+ L+    + PAVNQ+ELHP   QDEL K
Sbjct:    1 MTGESGAAAAPSITLNDEHTMPVLGLGVAELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAAS---GVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPA-----------PP----------VGKYVDAWGGMIQSRGEGHARSIGVSNFTAENIENLIDLTFVTPAVNQIELHPLLNQDELRK 182          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: AK1D1_MOUSE (3-oxo-5-beta-steroid 4-dehydrogenase OS=Mus musculus GN=Akr1d1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.586e-24
Identity = 77/200 (38.50%), Postives = 115/200 (57.50%), Query Frame = 1
Query:  196 LNTGAKIPAIGLGTWQ----TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLK--FAKIMPAVNQVELHPFWRQDELVKF 774
            L+ G  IP IGLGT+       G+  V AVKTA+  GYR+ID A++Y NE EVGEA+ E   +G +KRE++F    L+ + +  + +   +  +LK L + Y+DLY++  P   A   G    P  ++G       N L   W+A+E   D+GLV+++GVSNF   Q++ +L     K  P  NQVE HP++ Q +L+KF
Sbjct:   12 LSDGNNIPLIGLGTYSDPRPVPGKTYV-AVKTAIDEGYRHIDGAYVYHNEHEVGEAIREKIAEGKVKREEIFYCGKLWNTEHVPSMVLPALERTLKALKLDYIDLYIIELP--MAFKPGKEIYPRDENGRIIYDKTN-LCATWEALEACKDAGLVKSLGVSNFNRRQLELILNKPGLKYKPVTNQVECHPYFTQTKLLKF 207          
BLAST of CB290756 vs. ExPASy Swiss-Prot
Match: YJ66_YEAST (Uncharacterized oxidoreductase YJR096W OS=Saccharomyces cerevisiae GN=YJR096W PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.072e-24
Identity = 71/202 (35.15%), Postives = 108/202 (53.47%), Query Frame = 1
Query:  187 YFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK---GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNL-GVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKELLKFAKI--MPAVNQVELHPFWRQDELVKF 774
            ++ L+ G KIP+I LGT+        E V   +  GYR+ D A LYGNE EVG+ + +      G+ KRE++F T+ L+ S N   + +  +R  L  + G+ Y+DL L+H P                 GS+ R       + W+AM+  VD GLV++IGVSN+G   I ELL + ++   P VNQ+E+ P+  + EL  +
Sbjct:    5 FYKLSNGFKIPSIALGTYDIPRSQTAEIVYEGVKCGYRHFDTAVLYGNEKEVGDGIIKWLNEDPGNHKREEIFYTTKLWNSQNGYKRAKAAIRQCLNEVSGLQYIDLLLIHSP---------------LEGSKLR------LETWRAMQEAVDEGLVKSIGVSNYGKKHIDELLNWPELKHKPVVNQIEISPWIMRQELADY 185          
The following BLAST results are available for this feature:
BLAST of CB290756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
AK1CO_HORSE1.098e-2537.19Aldo-keto reductase family 1 member C23-like prote... [more]
GR_BACSU3.196e-2537.70Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=... [more]
6DCS_SOYBN3.196e-2538.02NAD(P)H-dependent 6'-deoxychalcone synthase OS=Gly... [more]
AK1D1_RAT5.451e-2535.753-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
Y2999_MYCTA7.120e-2534.47Uncharacterized oxidoreductase MRA_2999 OS=Mycobac... [more]
Y2996_MYCBO7.120e-2534.47Uncharacterized oxidoreductase Mb2996 OS=Mycobacte... [more]
Y2993_MYCBP7.120e-2534.47Uncharacterized oxidoreductase BCG_2993 OS=Mycobac... [more]
Y2971_MYCTU7.120e-2534.47Uncharacterized oxidoreductase Rv2971/MT3049 OS=My... [more]
AK1D1_MOUSE1.586e-2438.503-oxo-5-beta-steroid 4-dehydrogenase OS=Mus muscul... [more]
YJ66_YEAST2.072e-2435.15Uncharacterized oxidoreductase YJR096W OS=Saccharo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01dd05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dd05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290756 ID=CB290756; Name=CB290756; organism=Citrus sinensis; type=EST; length=775bp
GCACGTGGGACAAACACTTGGCCTGCACTTTTTAATACTGTCAAAAGCTT
TGAAGTGAAAAAAAAAATGCAAACTCTCGTCTGGGTTTTGTGATTTTTGG
TTTGATTTGGTATCTGTGTTTTTGATCTTTTTTTCTTTTTGTTCATTTGG
GAAATGAAAGGGAGATTTGCTAGTCCAGGGAGTAGTTACTTTGTGTTGAA
CACAGGAGCTAAAATTCCAGCCATTGGATTGGGAACATGGCAAACTGGGG
GAGAGCTTTGTGTTGAGGCTGTGAAAACAGCATTGTCAGTGGGTTACCGT
AATATAGATTGTGCTCATCTTTATGGGAATGAGATTGAAGTTGGGGAAGC
ACTTGATGAAGCTTTCAAAGGATCTCTCAAGAGAGAGGATGTGTTCCTGA
CCTCAACTCTCTATTGTAGTATGAATTCAATCAATAAGATTGAAAATTAC
GTCAGAGTGTCTCTTAAGAATCTTGGAGTTTCATATTTGGATCTCTATTT
AATGCATTGGCCTGAGTGCTCTGCTTCTGGTTTTGGGGATGCTACTGATC
CTCCTTCTAAGTCCGGGAGTGAGCGTAGGCAGTTTTTAAATCGCTTGAAG
AAAGCATGGAAAGCCATGGAAGGTCTCGTGGACTCGGGATTGGTCAGAGC
TATTGGTGTCAGTAATTTTGGGGTTTCACAGATCAAAGAGTTGCTTAAAT
TTGCCAAAATTATGCCTGCGGTGAATCAGGTGGAGTTGCATCCTTTTTGG
AGGCAGGATGAACTAGTAAAATTCT
back to top