CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_AQUAE (3-isopropylmalate dehydratase large subunit OS=Aquifex aeolicus GN=leuC PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.675e-32 Identity = 82/211 (38.86%), Postives = 115/211 (54.50%), Query Frame = -2 Query: 264 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF---LASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFLE 881 + D T +Y++ + P++ SD A + S Y +D S++EPLVA P+ P N E + ID+ +IGSCT G+ ED AAKVF L GKKV V ++PA++ ++ + IF EAGC S +CG CLGG A E C+ST+NRNFPGRMGH + + YLA+P AASA+ G + P E ++ Sbjct: 227 ISPDEKTIEYVKQRAKRPWKVYQSDPDAEYHSVYEWDASQIEPLVAWPYLPSNVHPVSESTHITIDQAFIGSCTNGRIEDLRVAAKVFEAALKQGKKVHPYVRCIVIPASKAIYKQALK--------EGLIDIFMEAGCVVSTS-TCGPCLGGHMGVLA---EGERCISTSNRNFPGRMGHPKSESYLANPAVVAASAIMGRIAHPDEVVK 425
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CLOBA (3-isopropylmalate dehydratase large subunit OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=leuC PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.412e-32 Identity = 82/202 (40.59%), Postives = 110/202 (54.46%), Query Frame = -2 Query: 279 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDP 878 P D T +YL++ T ++ +DE A + D+S L+P V+ PH PDN V ID+V IGSCT G+ D A + GKKVK + ++P TQK+++ + + EAG ++P+CG CLGG A+ CVSTTNRNF GRMGH E ++YLASP AAASALTG +TDP Sbjct: 229 PVDDKTVEYLKEHTEKEWKIYEADEDAEYDEVIEIDLSTLKPTVSFPHLPDNTRTIDNANRVNIDQVVIGSCTNGRISDLRIARGIL--KGKKVKKGIRCIVIPGTQKIYLQALE--------EGIIKDLIEAGA-VVSTPTCGPCLGGHMGILAKGER---CVSTTNRNFVGRMGHVESEVYLASPAVAAASALTGKITDP 416
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC2_THEMA (3-isopropylmalate dehydratase large subunit 2 OS=Thermotoga maritima GN=leuC2 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.412e-32 Identity = 81/204 (39.71%), Postives = 110/204 (53.92%), Query Frame = -2 Query: 273 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD--VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 878 P D T Y E + + E +Y DE A ++ E D+S+LEP VA P P N E + +KID+ IGSCT G+ ED AA++ V ++P +QKV+ + IF +AGC ++P+CG CLGG A E V +STTNRNF GRMGH +++LASP AAASA+ GY+ DPR+ Sbjct: 226 PVDEITIAY-ERERGIEVEEMYPDEDAKYVREVEMDLSELEPQVAYPFLPSNAKDVSEAEKERIKIDQAVIGSCTNGRIEDLRLAAQILKGRTVSPDVRCIIIPGSQKVYKQALK--------EGLIDIFIDAGCAV-STPTCGPCLGGHMGVLA---EGEVAISTTNRNFVGRMGHPNSKVFLASPAVAAASAIKGYIADPRK 416
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_DESHY (3-isopropylmalate dehydratase large subunit OS=Desulfitobacterium hafniense (strain Y51) GN=leuC PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.651e-31 Identity = 75/205 (36.59%), Postives = 110/205 (53.66%), Query Frame = -2 Query: 267 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 881 +P D T Y+ ++ PY+ +SD A ++ Y +D++ + VA PH P+N E K +KID+V IGSCT G+ ED AA++ V ++P TQ ++ + IF +AG ++P+CG CLGG A+ +STTNRNF GRMGH E ++YL+ P AAASA+TG ++ P E L Sbjct: 229 IPPDEKTLAYVNERAKRPYKVYHSDPDAQYVEVYEWDVADIPLQVAFPHLPENAKPVSEGKGIKIDQVVIGSCTNGRLEDMQVAAQILKGQKVHGDVRLIVIPGTQDIYKQAMQ--------EGLIDIFIDAGA-VVSTPTCGPCLGGYMGILAKGER---ALSTTNRNFVGRMGHPESEVYLSGPAVAAASAVTGEISHPEEVL 421
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CALS8 (3-isopropylmalate dehydratase large subunit OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=leuC PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.651e-31 Identity = 81/203 (39.90%), Postives = 114/203 (56.16%), Query Frame = -2 Query: 273 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 872 D T +Y++ ++ PY+ +DE A + Y DISK+ P VA PH P+N E + + ID+V IGSCT G+ ED AAK+ G+KVK + + PATQ ++ + +IF +AGC ++P+CG CLGG A E ++TTNRNF GRMGH ++YL+SP AAASA+ GY+ P E Sbjct: 233 DEKTIEYVKQHSTKPYKIFKADEDAEYSEVYEIDISKIRPTVAFPHLPENTKTIDEITEKIYIDQVVIGSCTNGRIEDLRIAAKIL--KGRKVKKGLRCIIFPATQNIYKQALK--------EGLIEIFIDAGC-VVSTPTCGPCLGGHMGILA---EGERALATTNRNFVGRMGHPNSEVYLSSPAIAAASAVLGYIGSPEE 421
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_HYDS0 (3-isopropylmalate dehydratase large subunit OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=leuC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.816e-31 Identity = 78/205 (38.05%), Postives = 111/205 (54.15%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + D T +Y+E + PY+ SD+ A ++ Y +D S +EP+VA P+ P N E + ID+ +IGSCT G+ ED AA + GKKV T ++PA++ V++ + IF EAGC S +CG CLGG A+ C+ST+NRNFPGRMGH + + YLA+P AASA+ G + P E Sbjct: 227 ISPDEKTIEYVEKRAKKPYKIYQSDKDAHYVEVYEWDASSIEPMVAWPYLPSNVHPVSESTHITIDQAFIGSCTNGRIEDLRIAASIL--KGKKVHPYTRCVVIPASKNVYLQAL--------HEGLVDIFIEAGCAVSTS-TCGPCLGGHMGILAKGER---CISTSNRNFPGRMGHPQSEAYLANPAVVAASAVLGRIAHPEE 417
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CLOBB (3-isopropylmalate dehydratase large subunit OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=leuC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.816e-31 Identity = 80/202 (39.60%), Postives = 109/202 (53.96%), Query Frame = -2 Query: 279 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDP 878 P D T +YL++ T +E +DE A + +++ L P V+ PH PDN D+ ID+V IGSCT G+ D A + GKKVK + ++P TQ +++ + + EAG ++P+CG CLGG A+ CVSTTNRNF GRMGH E ++YLASP AAASALTG +TDP Sbjct: 229 PVDDKTVEYLKEHTKKEWEVYKADEDAEYDEVIEIELNTLRPTVSFPHLPDNTRTIDNVGDIDIDQVVIGSCTNGRISDLRIARDIL--KGKKVKKGIRCIVIPGTQNIYLQALE--------EGIIKDLIEAGV-VVSTPTCGPCLGGHMGILAKGER---CVSTTNRNFVGRMGHVESEVYLASPAVAAASALTGKITDP 416
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC2_ARCFU (3-isopropylmalate dehydratase large subunit 2 OS=Archaeoglobus fulgidus GN=leuC2 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.816e-31 Identity = 78/189 (41.27%), Postives = 113/189 (59.79%), Query Frame = -2 Query: 267 YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 827 + V +DE A + E D+S L P+V+KPH+ DN A E + ++++VYIG+CT G+ D AA++ G+KVK V +VPA+++V++ K ++F EAG +P CG C+G + A + VC+ST NRNF GRMG+ +I+LASP TAAASA+ GY+ DPREFL Sbjct: 242 FREVKADEDAEYEKEIYMDVSSLVPVVSKPHNVDNVAEISEVEGTEVNQVYIGTCTNGRLSDLEVAARIL--KGRKVKEGVRLIVVPASRRVYLQAL--------DKGLIRVFVEAG-GMVLNPGCGPCVGIHQGILA---DGEVCISTQNRNFKGRMGNPNAEIFLASPATAAASAVKGYIADPREFL 416
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_SULTO (3-isopropylmalate dehydratase large subunit OS=Sulfolobus tokodaii GN=leuC PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.194e-31 Identity = 83/203 (40.89%), Postives = 109/203 (53.69%), Query Frame = -2 Query: 270 DGTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 872 D T Y+ KT+ YEP V DE A ++ EY D+ KLEPLVA PHS DN E + + +D+V+IGSCT G+ DF AAK+ GK+VK +PA+ ++ L + AGC +CG CLGG + VST++RNF GRMG + ++YLA P AAASAL G +TDPR F Sbjct: 228 DEETVNYI--KTNRGYEPNIVRPDEGAKYVDEYTIDLGKLEPLVAAPHSVDNVKTVNEVEGLDVDQVFIGSCTNGRISDFEIAAKIL--KGKRVKSRCIAIPASYDLFKKAMELGY--------IETLVNAGCIVTYG-TCGPCLGG---HFGVAGPGETIVSTSSRNFKGRMGSNDSKVYLAGPAVAAASALQGKITDPRRF 414
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_ANATD (3-isopropylmalate dehydratase large subunit OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=leuC PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.070e-30 Identity = 79/203 (38.92%), Postives = 114/203 (56.16%), Query Frame = -2 Query: 273 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 872 D T +Y++ ++ PY+ +DE A + + DISK+ P VA PH P+N E + + ID+V IGSCT G+ ED AAK+ G+KVK + + PATQ ++ + +IF +AGC ++P+CG CLGG A + + +TTNRNF GRMGH ++YL+SP AAASA+ GY+ P E Sbjct: 233 DEKTIEYVKQHSTKPYKIFKADEDAEYSQVFEIDISKIRPTVAFPHLPENTKTIDEITEKIYIDQVVIGSCTNGRIEDLRIAAKIL--KGRKVKKGLRCIIFPATQNIYKQALK--------EGFIEIFIDAGC-VVSTPTCGPCLGGHMGILADGEKAL---ATTNRNFVGRMGHPNSEVYLSSPAIAAASAVLGYIGSPEE 421 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |