CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BRUC2 (3-isopropylmalate dehydratase large subunit OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 83/251 (33.07%), Postives = 111/251 (44.22%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 + D TTF+Y++ + P ++ ++SDE A F D L P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED AAAKV GKKV PT V + VPGSG + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R Sbjct: 236 IAPDETTFEYIKGRPRAPQGETLEQAINYWKTLHSDEGAHFDKIVTLDAGSLPPIVSWGSSPEDVVSVTGVVPNPDDIADETKRASKWRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAAAKV--VEGKKV-APT------------VNAMIVPGSGLVKEQAEAEGLHKIFIEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BRUAB (3-isopropylmalate dehydratase large subunit OS=Brucella abortus GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 83/251 (33.07%), Postives = 111/251 (44.22%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 + D TTF+Y++ + P ++ ++SDE A F D L P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED AAAKV GKKV PT V + VPGSG + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R Sbjct: 236 IAPDETTFEYIKGRPRAPQGETLEQAINYWKTLHSDEGAHFDKIVTLDAGSLPPIVSWGSSPEDVVSVTGVVPNPDDIADETKRASKWRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAAAKV--VEGKKV-APT------------VNAMIVPGSGLVKEQAEAEGLHKIFIEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BRUA2 (3-isopropylmalate dehydratase large subunit OS=Brucella abortus (strain 2308) GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 83/251 (33.07%), Postives = 111/251 (44.22%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 + D TTF+Y++ + P ++ ++SDE A F D L P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED AAAKV GKKV PT V + VPGSG + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R Sbjct: 236 IAPDETTFEYIKGRPRAPQGETLEQAINYWKTLHSDEGAHFDKIVTLDAGSLPPIVSWGSSPEDVVSVTGVVPNPDDIADETKRASKWRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAAAKV--VEGKKV-APT------------VNAMIVPGSGLVKEQAEAEGLHKIFIEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BRUA1 (3-isopropylmalate dehydratase large subunit OS=Brucella abortus (strain S19) GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 83/251 (33.07%), Postives = 111/251 (44.22%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 + D TTF+Y++ + P ++ ++SDE A F D L P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED AAAKV GKKV PT V + VPGSG + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R Sbjct: 236 IAPDETTFEYIKGRPRAPQGETLEQAINYWKTLHSDEGAHFDKIVTLDAGSLPPIVSWGSSPEDVVSVTGVVPNPDDIADETKRASKWRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAAAKV--VEGKKV-APT------------VNAMIVPGSGLVKEQAEAEGLHKIFIEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_NITWN (3-isopropylmalate dehydratase large subunit OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=leuC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19 Identity = 79/253 (31.23%), Postives = 112/253 (44.27%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP-----------DNRALARECK--------------------DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D T +++L+ + P +E + SD+ A F E R D +KL P+V SP D A+ E K D+++DRV+IGSCT G+ ED AAAK+ A G+ V +V + VPGSG + +IF AG + P C CL D ++ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 235 IAPDETAYEFLKGRPKAPKGADWDAALRYWETLRSDDGAHFDHEIRLDAAKLPPIVTWGTSPEDVIAVTGKVPDPAAIEDEAKRLSKERALHYMGLLPGTKITDIRLDRVFIGSCTNGRIEDLRAAAKI--AEGRTVN-------------GNVSAMVVPGSGLVKEQAEAEGLDKIFTRAGFEW-REPGCSMCLAMNPD---KLKPDERCASTSNRNFEGRQGFK-GRTHLVSPSMAAAAAIAGHFVDIREW 467
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_RHISN (3-isopropylmalate dehydratase large subunit OS=Rhizobium sp. (strain NGR234) GN=leuC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.397e-19 Identity = 80/253 (31.62%), Postives = 112/253 (44.27%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D TTF Y++DK P ++ +++DE A + D + L P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED A AKV G+KV V + VPGSG + +IF+EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 236 IAPDETTFDYIKDKPRAPKGKAWDMALDYWKTLHTDEGAHYDRIVVLDAADLPPIVSWGSSPEDVISVQGAVPNPDDIQEETKRASKWRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAVAKV--VEGRKVA-------------STVSAMIVPGSGLVKEQAEAEGLDKIFKEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAVAGHFVDIREW 468
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_AGRVS (3-isopropylmalate dehydratase large subunit OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=leuC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.397e-19 Identity = 78/253 (30.83%), Postives = 111/253 (43.87%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D TF+Y++ K P ++ +++DE A F D + L P+V+ SP++ RAL + D+ IDRV+IGSCT G+ ED AAA V +KV V + VPGSG + +IF +AGC+ P C CL D R+ C ST+NRNF GR G+K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 236 IAPDEKTFEYIKGKPRAPKGEELEMALQYWKTLHTDEGAHFDRTVVLDAANLPPIVSWGSSPEDVISVQGVVPNPDDIADENKRTSKWRALDYMGLKPGTKITDITIDRVFIGSCTNGRIEDLRAAAAVL---------------KDRKVASTVSAMVVPGSGLVKEQAEAEGLDKIFLDAGCEW-REPGCSMCLAMNDD---RLKPEERCASTSNRNFEGRQGYK-GRTHLVSPAMAAAAAIAGHFVDIREW 468
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_RHOP2 (3-isopropylmalate dehydratase large subunit OS=Rhodopseudomonas palustris (strain HaA2) GN=leuC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.603e-18 Identity = 81/253 (32.02%), Postives = 111/253 (43.87%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D + YL+ + P ++ + SDE A F E R D + L P+V SP++ RALA + D+KIDR++IGSCT G+ ED AAAKV A GK V +V + VPGSG + +IF +AG + P C CL D A C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R++ Sbjct: 237 IAPDEKAYAYLKGRPMAPTGAHWDAAMRYWDTLRSDEGAHFDHELRLDAAALPPIVTWGTSPEDVISVTGKVPNPADIADEAKRLSKERALAYMGLTPGTKITDIKIDRMFIGSCTNGRIEDLRAAAKV--AEGKTVNA-------------NVNAIIVPGSGLVKEQAEAEGLDKIFVKAGFEW-REPGCSMCLAMNPDKLAPEER---CASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIRDW 469
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_RHOPS (3-isopropylmalate dehydratase large subunit OS=Rhodopseudomonas palustris (strain BisB5) GN=leuC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18 Identity = 82/253 (32.41%), Postives = 110/253 (43.48%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D + YL+ + P ++ + SDE A F E R D + L P+V SP++ RALA D+KIDR++IGSCT G+ ED AAAKV A GK V +V + VPGSG + +IF +AG + P C CL D A C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 237 IAPDEKAYAYLKGRPMAPTGANWDAAMRYWDTLRSDEGAHFDHELRLDAAALPPIVTWGTSPEDVISITGRVPNPADIADEAKRLSKERALAYMGLTPGTRITDIKIDRMFIGSCTNGRIEDLRAAAKV--AEGKTVN-------------GNVSAMIVPGSGLVKEQAEAEGLDKIFVKAGFEW-REPGCSMCLAMNPDKLAPEER---CASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIREW 469
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_RHOP5 (3-isopropylmalate dehydratase large subunit OS=Rhodopseudomonas palustris (strain BisA53) GN=leuC PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.734e-18 Identity = 78/224 (34.82%), Postives = 102/224 (45.54%), Query Frame = -2 Query: 270 YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 827 ++ + SDE A F E R D + L P+V SP++ RALA + D+KIDR++IGSCT G+ ED AAAKV A GK V +V + VPGSG + +IF AG + P C CL D A C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 266 WQTLRSDEGAHFDHEIRLDAAALPPIVTWGTSPEDVISITGKVPNPADIADEAKRLSKERALAYMGLNPGTKITDIKIDRMFIGSCTNGRIEDLRAAAKV--AEGKTVNA-------------NVNAIIVPGSGLVKEQAEAEGLDKIFIAAGFEW-REPGCSMCLAMNPDKLAPDER---CASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIREW 469 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |