CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_SOLUE (3-isopropylmalate dehydratase large subunit OS=Solibacter usitatus (strain Ellin6076) GN=leuC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16 Identity = 62/143 (43.36%), Postives = 75/143 (52.45%), Query Frame = -2 Query: 267 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 689 ID V+IGSCT + D AA L G+KV KV +VP +Q+V +P +IF AGCD P C C+ D A VST+NRNF GR G K G+ +LASP TAAASA+TG VTD R L Sbjct: 339 IDVVFIGSCTNSRISDLRTAAG--LLKGRKVSPKVRVMVVPGSQEVKRQAIAEGLP--------EIFRAAGCDY-REPGCSMCIAMNGDQLAPGE---YSVSTSNRNFEGRQG-KGGRTFLASPLTAAASAITGVVTDVRTLL 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_PROMH (3-isopropylmalate dehydratase large subunit OS=Proteus mirabilis (strain HI4320) GN=leuC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16 Identity = 79/253 (31.23%), Postives = 107/253 (42.29%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLPYEPVY-----------SDEKASFLSEYRFDISKLEPLVA-------------------KPHSPDNRALAREC------------KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 V D TTF YL+ + P P++ SDE A F + + +++ P V + P RA A + D+ ID+V+IGSCT + ED AAAK+ A G KV V + VPGSG + +IF EAG + P C CL D R+N C ST+NRNF GR G + G+ +L SP AAA+A+ G+ D R F Sbjct: 233 VAPDETTFAYLKGRQFAPQAPLWDEAVAYWKTLKSDEDAIFDATVTINAAEIAPQVTWGTNPGQVIAIDQIVPRLNSFNDPVERASAEKALAYMGLTEGVNLTDITIDKVFIGSCTNSRIEDLRAAAKI--AKGHKVA-------------SHVQAIVVPGSGPVKAQAEAEGLDKIFIEAGFEW-RLPGCSMCLAMNND---RLNPGERCASTSNRNFEGRQG-RGGRTHLVSPAMAAAAAIHGHFADIRTF 465
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_AGRRK (3-isopropylmalate dehydratase large subunit OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=leuC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16 Identity = 78/253 (30.83%), Postives = 108/253 (42.69%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D TTF+Y++ K P ++ + +DE A + D + L P+V+ SP++ RAL ++ IDRV+IGSCT G+ ED A AKV GK V V + VPGSG + +IF+ AG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 236 IAPDETTFEYIKGKPRSPTGEALEQAIAYWKTLQTDEGAHYDRVVVLDAAALPPIVSWGSSPEDVVSVQGIVPNPDEIQDENKRTSKWRALDYMGLKPGTPMTEINIDRVFIGSCTNGRIEDLRAVAKV--VEGKTVA-------------STVDAMIVPGSGLVKEQAEAEGLDKIFKAAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIREW 468
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_PROM0 (3-isopropylmalate dehydratase large subunit OS=Prochlorococcus marinus (strain MIT 9301) GN=leuC PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16 Identity = 69/243 (28.40%), Postives = 104/243 (42.80%), Query Frame = -2 Query: 267 DGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVA------------------KPHSPDNRALAREC------------KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 872 D TF Y+++K P ++ + SD + + + D SK+EP V + SPD++ +A+E KD ID +IGSCT G+ D AAKV + F+VP ++KV + + +IF +AG P C CL D ++ + S++NRNF GR G G+ L SP AA+A++G VTD R F+ Sbjct: 237 DEKTFSYIKNKLCAPRNENWDEALLWWKSLKSDANSIYDDVTKIDASKVEPTVTWGITPGQSVGINQKIPLLEELSPDDQFVAKEAYEYMGFKPGQSIKDTPIDVCFIGSCTNGRISDLRVAAKVVKDKKVSQNIKAFVVPGSEKVAKEAKI--------EGLDKIFLDAGFQW-REPGCSMCLAMNSD---KLIGNQLSASSSNRNFKGRQGSPNGRTLLMSPAMVAAAAISGKVTDIRNFM 467
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_NEIMA (3-isopropylmalate dehydratase large subunit OS=Neisseria meningitidis serogroup A GN=leuC PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16 Identity = 78/251 (31.08%), Postives = 102/251 (40.64%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD------------------------NRAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 V D TT Y++DK P + + SDE A F EYRF+ +EP V SP+ RAL ++ +D V+IGSCT + ED AA + K V L+ VPGSG + +IF EAG + P C CL D R+ C ST+NRNF GR G+ G+ +L SP AAA+A+TG TD R Sbjct: 235 VAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFDKEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLEAGTPLNEIPVDIVFIGSCTNSRVEDLREAAAIAKDRKKAANVQRVLI--------------VPGSGLVKEQAEKEGLDKIFIEAGFEW-REPGCSMCLAMNAD---RLTPGQRCASTSNRNFEGRQGN-GGRTHLVSPAMAAAAAVTGRFTDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_KINRD (3-isopropylmalate dehydratase large subunit OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=leuC PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16 Identity = 77/245 (31.43%), Postives = 102/245 (41.63%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 V D TTF YLE + P + + +D+ A F +E D S LEP V +P RAL +D+ +D V+IGSCT + ED AAA V K V +VP + KV L G T +F+E G D + C CLG D A C ST+NRNF GR G K G+ +L SP AAA+A+ G ++ P + Sbjct: 237 VAPDETTFAYLEGRPHAPQGADWDAAVEYWRTLRTDDDAEFDAEVVLDGSALEPFVTWGTNPGQGVPLSGSVPEPERIGDDGVRQGVERALEYMGLEGGTPMRDIAVDTVFIGSCTNSRIEDLRAAADVVRGRRKADSVRVMVVPGSAKV-----RLQAEAEGIDT---VFKEFGADWRFA-GCSMCLGMNPDQLAPGER---CASTSNRNFEGRQG-KGGRTHLVSPLVAAATAVRGTLSSPAD 468
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_HAEPS (3-isopropylmalate dehydratase large subunit OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=leuC PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16 Identity = 80/251 (31.87%), Postives = 110/251 (43.82%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RALAR-------ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 + D TTF YL+D+ S P ++ +++DE A F + + S++EP V +P + +ALA + DV ID+V+IGSCT + ED AAA V A G+KV V L VPGSG + +IF EAG + P C CL D R+ C ST+NRNF GR G + G+ +L SP AAA+A+ G D R Sbjct: 233 IAPDETTFAYLKDRPSAPKGKDWDDAVAYWKTLHTDEGAEFDTVVTLEASEIEPQVTWGTNPGHVIGINETIPNPADMADPIERQSAEKALAYMGLPHSIKLTDVAIDKVFIGSCTNSRIEDLRAAAAV--AKGRKVA-------------DGVQALVVPGSGLVREQAEKEGLDKIFIEAGFEW-RQPGCSMCLAMNND---RLEPGERCASTSNRNFEGRQG-RGGRTHLVSPAMAAAAAVHGKFVDIR 463
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_SILPO (3-isopropylmalate dehydratase large subunit OS=Silicibacter pomeroyi GN=leuC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.365e-16 Identity = 74/253 (29.25%), Postives = 113/253 (44.66%), Query Frame = -2 Query: 267 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-----------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 881 + D TTF Y++ + P ++ +YSD+ A F ++EP+V SP++ R++ ++ D++ID V+IGSCT G+ ED A A+V GKK+K + + VPGSG + + I ++AG + + C CL D A C +T+NRNF GR G+K G+ +L SP AAA+ALTG +TD RE + Sbjct: 236 IAPDQTTFDYVKGRPHAPKGAQWEAALAWWKTLYSDDGAHFDKIVTLKGEEIEPVVTWGTSPEDVLPITGVVPSPEDFTGGKVEAARRSIEYMGLTPGQKLTDIEIDTVFIGSCTNGRIEDLRAVAEV--VKGKKIK-------------SGLRAMVVPGSGLVRAQAEEEGIADILKDAGFEWRLA-GCSMCLAMNPDQLAPGER---CAATSNRNFEGRQGYK-GRTHLVSPAMAAAAALTGKLTDVRELI 468
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_RHIPU (3-isopropylmalate dehydratase OS=Rhizomucor pusillus GN=LEUA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.365e-16 Identity = 65/170 (38.24%), Postives = 88/170 (51.76%), Query Frame = -2 Query: 273 LEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 761 L+ + KP++P ++VKID+V+IGSCT + ED AAA + A G+ V W VY + VPGSG + +IF+EAG D C CLG D ++ C ST+NRNF GR G G+ +L SP AAA+A+TGY TD R+ Sbjct: 329 LDYIGLKPNTP--------MQEVKIDKVFIGSCTNSRIEDLRAAAAI--AKGRHV-----------ADW--VYAMVVPGSGLVKKQAEQEGLDRIFKEAGFDW-REAGCSMCLGMNPD---QLKPGERCASTSNRNFEGRQG-AGGRTHLMSPAMAAAAAVTGYFTDVRK 470
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_RHIL3 (3-isopropylmalate dehydratase large subunit OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=leuC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.365e-16 Identity = 78/253 (30.83%), Postives = 109/253 (43.08%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D TF+Y++ K P ++ + +DE A + D + L P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED AKV GK V PT V + VPGSG + +IF+ AG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 236 IAPDEKTFEYIKGKPRAPKGEALEQAIAYWKTLQTDEGAHYDRVVVLDAASLPPIVSWGSSPEDVISVQGIVPNPDDIPDETKRTSKWRALDYMGLKPGTKMTDITLDRVFIGSCTNGRIEDLREVAKV--VEGKTV-APT------------VDAMIVPGSGLVKEQAEAEGLDKIFKAAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIREW 468 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |