CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_THEYD (3-isopropylmalate dehydratase large subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=leuC PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.018e-29 Identity = 77/202 (38.12%), Postives = 111/202 (54.95%), Query Frame = -2 Query: 273 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 872 D T +Y++ + PY+ SD+ A + +D S++ P+VA PH P N A E +KID+V IGSCT G+ ED AA V G+KV +V ++PATQK++M + +IF +A + P+CG CLGG A+ ++TTNRNF GRMGH E ++YL++P AAAS + G + P E Sbjct: 231 DKITEEYVKLRAKRPYKIYNSDQDAKYFEIKEYDCSRIPPVVACPHLPSNVKPANELSHIKIDQVVIGSCTNGRLEDLREAAMVL--KGRKVHPEVRMIIIPATQKIYMQALK--------EGLIEIFIDAQA-VVSPPTCGPCLGGHMGILAKGER---AIATTNRNFVGRMGHPESEVYLSNPAVAAASGVLGRIGTPEE 418
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_METS5 (3-isopropylmalate dehydratase large subunit OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=leuC PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.018e-29 Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = -2 Query: 273 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 872 D T Y++ E V D A +L E+ ++ KLEPLVA P+S DN ARE V +D+VYIGSCT G+ DF A+++ GKKVK +P++ ++ + + AGC +CG CLGG + V VST++RNF GRMG E ++YL+ P AAASA TGY+TDPR+ Sbjct: 228 DVETKDYIKTMRGKEVELVTPDPGAKYLDEHTIELDKLEPLVAAPYSVDNVKTAREESKVPVDQVYIGSCTNGRLSDFRIASEIL--KGKKVKTRCIAIPSSYTMFKQAMEMGY--------IEDLVNAGC-VVTYGTCGPCLGG---HFGVAGPGEVIVSTSSRNFRGRMGSNEAKVYLSGPSVAAASAATGYITDPRD 413
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_PYRIL (3-isopropylmalate dehydratase large subunit OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=leuC PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.443e-29 Identity = 77/202 (38.12%), Postives = 112/202 (55.45%), Query Frame = -2 Query: 267 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 872 D T YL+ + + Y+P + ++ +Y ++SKLEPLVA P+S DN RE + V++D+V+IGSCT G+ DF AA++ +VK +PA+ ++ L I +AGC +CG CLGG + V VST+NRNF GRMGH + ++YLA+P TAAA+AL G + DPR +L Sbjct: 227 DVVTVDYLQRERGVSYKPP-DLQPGRYVDKYVVELSKLEPLVAAPYSVDNVKAVREVEGVEVDQVFIGSCTNGRLSDFEIAARILRRG--RVKSRCIAIPASYTIFRKALELGY--------IDILTKAGC-VVTYGTCGPCLGG---HFGVAGPGEVVVSTSNRNFKGRMGHPDSKVYLANPATAAAAALEGKIVDPRPYL 413
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_THENV (3-isopropylmalate dehydratase large subunit OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=leuC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.873e-29 Identity = 76/202 (37.62%), Postives = 111/202 (54.95%), Query Frame = -2 Query: 267 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 872 D T YL+ + + Y+P S E ++ Y ++ +LEPLVA P+S DN ARE + V++D+V+IGSCT G+ DF AA+V + K +PA+ V+ L + +AGC +CG CLGG + V V+T+NRNF GR+GH + ++YLA+P TAAA+AL G + DPR +L Sbjct: 227 DEVTADYLQRERGVSYKPP-SLEPGRYVDRYEVELQRLEPLVAAPYSVDNVKAAREVEGVEVDQVFIGSCTNGRLSDFEVAARVLKRG--RAKARCIAIPASYAVFRRAMELGY--------IDVLTKAGC-VVTYGTCGPCLGG---HFGVAGPGEVVVTTSNRNFKGRVGHPDSKVYLANPATAAAAALEGKIVDPRPYL 413
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_SULSO (3-isopropylmalate dehydratase large subunit OS=Sulfolobus solfataricus GN=leuC PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.670e-29 Identity = 75/199 (37.69%), Postives = 106/199 (53.27%), Query Frame = -2 Query: 276 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 872 D T +Y+++ E V D A ++ EY + ++EPLVA PHS DN + E + +D+VYIGSCT G+ DF AAK+ GKKVK +PA+ +++ + + Q +AGC +CG CLGG + VST++RNF GRMG E ++YL+ P AA SAL G +TDPR Sbjct: 230 DQETKRYIKEMRGYEPELVTPDNGAKYVDEYTIQLDEMEPLVAAPHSVDNVKVVNELEGTPVDQVYIGSCTNGRLSDFEIAAKIM--KGKKVKSRCIAIPASYRMFKEALE--------RGYIQTLVDAGCIVTYG-TCGPCLGG---HFGIAGPGENIVSTSSRNFKGRMGSNEAKVYLSGPAVAAISALEGKITDPR 414
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_NITSB (3-isopropylmalate dehydratase large subunit OS=Nitratiruptor sp. (strain SB155-2) GN=leuC PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.670e-29 Identity = 85/209 (40.67%), Postives = 116/209 (55.50%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK-DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + D T +L DK L EP YSDE A + D++ LEP++A PH P N R ++ K D+K+D+V+IGSCT G+ D AA++ G+KV T ++ PATQK+ + + I +AG ++P+CGACLGG A CVSTTNRNF GRMG + +IYLA+ AAASA+ G + DPRE Sbjct: 227 IAVDEVTKAFLADKP-LAREPKIHYSDEDAEYEQVIEIDVNNLEPVIAFPHLPSNGRPISEAAKMDLKVDQVFIGSCTNGRLSDIAIAAEIL--KGRKVARHTRMIVTPATQKILKEAEK--------RGYIDILIDAGA-VVSNPTCGACLGGYMGILADNER---CVSTTNRNFVGRMGARTSEIYLANSAVAAASAVAGKIADPRE 420
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_SULSY (3-isopropylmalate dehydratase large subunit OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=leuC PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.002e-28 Identity = 74/203 (36.45%), Postives = 107/203 (52.71%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + D T ++ +T+ ++ SD A + EY FD SK+EP+VA P P N E ID+V+IGSCT G+ D AA + + +V ++PA+ +++ + +I +AGC S +CG CLGG A E VC+ST+NRNF GRMGH + Q+YL+SP AAASA+ G + P E Sbjct: 228 IEPDEKTVDWVRKRTNREFKLYKSDPDAKYCCEYEFDASKIEPVVACPSLPSNVKPVSEVAGTHIDQVFIGSCTNGRLSDLRIAAAILKSKKVHPEVRCIVIPASDQIYKQAL--------HEGIIEILADAGCLISTS-TCGPCLGGHMGILA---EGEVCLSTSNRNFVGRMGHPKSQVYLSSPAVAAASAVLGRIAHPDE 418
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CLOD6 (3-isopropylmalate dehydratase large subunit OS=Clostridium difficile (strain 630) GN=leuC PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.002e-28 Identity = 83/211 (39.34%), Postives = 113/211 (53.55%), Query Frame = -2 Query: 267 PADGTTFKYLED---KTSLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 878 P D T +Y+ T +Y +DE A + Y D++KL+ VA PH P+N E KD+KID+V IGSCT G+ D A++ GKKV V + P TQKV+++ K F EAG ++P+CG CLGG A + +STTNRNF GRMGH + ++YLASP AAASA+TG ++ P E + Sbjct: 229 PVDDKTMEYINSHKCSTMTKDVNIYEADEDAVYDEVYEIDLAKLKETVAFPHLPENTRTVDEIDKDIKIDQVVIGSCTNGRISDLEVVAEIM--KGKKVADGVRVMIFPGTQKVYLEAIE--------KGYITTFIEAGAAV-STPTCGPCLGGHMGILAAGEKS---ISTTNRNFVGRMGHVDSEVYLASPAVAAASAITGKISKPSEII 425
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_THEPX (3-isopropylmalate dehydratase large subunit OS=Thermoanaerobacter sp. (strain X514) GN=leuC PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.308e-28 Identity = 76/202 (37.62%), Postives = 108/202 (53.47%), Query Frame = -2 Query: 273 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 872 D T Y++ + Y+ DE A + Y ++ ++ P VA PH P+N E VKID+V IGSCT G+ D A K+ GKKV V + PATQ+++++ + + F +AG ++P+CG CLGG AR ++TTNRNF GRMGH E ++YL+SP AAASA+ GY+ P E Sbjct: 229 DEITEAYVKGRAKREYKVFERDEDAEYSEVYEINLDEIRPQVAFPHLPENTRSIDEVGKVKIDQVVIGSCTNGRLSDMEIAYKIL--KGKKVHPDVRLLIFPATQEIYLECVK--------RGYIEEFIKAGA-AVSTPTCGPCLGGHMGILARGER---ALATTNRNFVGRMGHPESEVYLSSPAVAAASAIAGYIVSPEE 416
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CAMHC (3-isopropylmalate dehydratase large subunit OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=leuC PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.308e-28 Identity = 84/208 (40.38%), Postives = 115/208 (55.29%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 + AD T ++ +DK +L EP YSDE A + D+S LEP+VA P P N + ++KID+ +IGSCT G+ D AA++ GKKV T L+ PATQK++ + + IF +AG ++P+CGACLGG CVSTTNRNF GRMG + ++YLA+ AASA+TG +TDPR Sbjct: 226 IAADEITKQFFKDK-NLRAEPKYFYSDEDAFYERTVEIDMSALEPMVAYPFLPSNGKTITQAVADELKIDQAFIGSCTNGRLSDLRIAAEIL--KGKKVAKKTRLIITPATQKIYK--------AAEHEGLIDIFIDAGA-VVSNPTCGACLGGYMGILGANER---CVSTTNRNFVGRMGDRTSEVYLANSAVVAASAITGKITDPR 418 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |