CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_WOLSU (3-isopropylmalate dehydratase large subunit OS=Wolinella succinogenes GN=leuC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.232e-28 Identity = 77/207 (37.20%), Postives = 114/207 (55.07%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + AD T ++L + SL EP Y +D A + D+ KLEP++A P P N +++++ KD +KID+ +IGSCT G+ D AA++ V + P TQ+++ D + + EAG ++P+CGACLGG + + CVSTTNRNF GRMG + ++YLA+ AAASAL G +TDPR+ Sbjct: 227 IAADSITKEFLASRKSLRAEPKYYQADADALYEQTIEIDVEKLEPVIAYPFLPSNGKSISQAVKDDLKIDQAFIGSCTNGRLSDLRIAAQILKGKRVHPDVRLIITPGTQQIYKDAHQ--------EGLIDTLLEAGA-LISNPTCGACLGGYMGI---LGDNERCVSTTNRNFVGRMGARSSEVYLANSAVAAASALKGKITDPRK 421
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_PYRAE (3-isopropylmalate dehydratase large subunit OS=Pyrobaculum aerophilum GN=leuC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.232e-28 Identity = 75/202 (37.13%), Postives = 111/202 (54.95%), Query Frame = -2 Query: 267 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 872 D T +YL+ + + Y P E ++ +Y ++ +LEPLVA P+S DN RE + V++D+V+IGSCT G+ D AAK+ G++VK +PA+ +V+ L + EAGC +CG CLGG + V V+T+NRNF GR+GH + +IYLA+P AAA+A G + DPR +L Sbjct: 227 DVITAEYLKTERGVDYTPPRI-EPGNYADKYTVELPRLEPLVAAPYSVDNIKSVREVEGVEVDQVFIGSCTNGRLSDIAVAAKIL--KGRRVKSRCIAIPASYEVFRRAMKLGY--------IDVLTEAGC-VVTYGTCGPCLGG---HFGVAGPGEVVVTTSNRNFRGRVGHPDAKIYLANPAVAAATAAEGKIADPRPYL 413
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC2_DEIRA (3-isopropylmalate dehydratase large subunit 2 OS=Deinococcus radiodurans GN=leuC2 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.232e-28 Identity = 79/214 (36.92%), Postives = 111/214 (51.87%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP--YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG------GPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 V D TT Y++ + P Y SD A + D +++EP VA PH P N +A + +++ Y+GSCT G+ D A++ G+KV V +VPATQ +W + + +IF +AG + PSCGACLG GP D +C+S++NRNF GRMG QIYLASP T AASA+ G++ DPR + Sbjct: 228 VAVDDTTRAYMQQRGVSPEQYTEYQSDPDAKYKVVVEIDAAQVEPTVAYPHIPSNGRVAGSDR-IRVTHAYVGSCTNGRITDLRDVARIL--KGRKVAQDVQMIVVPATQAIWKQ--------AAQEGLLEIFVDAGASV-SYPSCGACLGMHSGVLGPDD---------ICISSSNRNFVGRMGDPSAQIYLASPATVAASAVEGFIADPRRY 420
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC1_PYRAB (3-isopropylmalate dehydratase large subunit 1 OS=Pyrococcus abyssi GN=leuC1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.232e-28 Identity = 76/210 (36.19%), Postives = 115/210 (54.76%), Query Frame = -2 Query: 264 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRA-LARECK-DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFLE 881 + D T Y++++ ++ SDE A + +D++ EP+VA PH P+N +++ K ++KID+V+IGSCT G+ ED AA++ G+KV V ++P + V+ + +IF EAG P+CG CLGG A VSTTNRNF GRMGH + ++YLA+PY AAASA+ G + P E ++ Sbjct: 228 IEPDKKTLDYVKERAKRKFKVYKSDEDAKYYKVIEYDVTNWEPVVAFPHLPENTVPISKAAKMNIKIDQVFIGSCTNGRIEDLRMAAEIL--EGQKVAKWVRLIVIPCSPTVYWKALK--------EGLIEIFLEAGA-VIGPPTCGPCLGGHMGVLASGER---AVSTTNRNFVGRMGHPKSEVYLANPYVAAASAVLGRIASPEEVVK 423
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_PYRCJ (3-isopropylmalate dehydratase large subunit OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=leuC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.915e-28 Identity = 75/202 (37.13%), Postives = 110/202 (54.46%), Query Frame = -2 Query: 267 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 872 D T YL + + Y+P + EY ++ +LEPLVA PHS DN E + +++D+V+IGSCT G+ D AAK+ L G+ VK +PA+ V+ L + +AGC +CG CLGG + V ++T+NRNF GR+GH + ++YLA+P AAA+ALTG +TDPR++L Sbjct: 227 DEVTVAYLHEARGVSYKPPALGG-GKYADEYTVELGRLEPLVAAPHSVDNVKAVAEVEGIEVDQVFIGSCTNGRLSDIEVAAKI-LRHGR-VKARCIAIPASYDVFRRAMELGYV--------DVLTKAGCVVTYG-TCGPCLGGH---FGVAGPGEVVLTTSNRNFKGRVGHPDSKVYLANPAVAAATALTGRITDPRQYL 413
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_ELUMP (3-isopropylmalate dehydratase large subunit OS=Elusimicrobium minutum (strain Pei191) GN=leuC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.915e-28 Identity = 70/188 (37.23%), Postives = 106/188 (56.38%), Query Frame = -2 Query: 264 YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFLE 827 ++ + +DE A + + D S LEP V+ PH+ DN E KD+K+++V+IG+CT G+ ED AA++ TF+ PA++ V + + +IF +AG +P CG C+G + + VC++T NRNF GRMG+ +G IYL+SP AA SAL GY++DPRE L+ Sbjct: 243 FKLISADEGADYEKVIKIDASSLEPTVSCPHTVDNTKTVGELKDIKVNQVFIGTCTNGRIEDLRIAAEILKDKKVNPGTRTFITPASRDVMLAALK--------EGLIEIFVKAGASV-QTPGCGPCVGVHGGI---LGDGEVCLATQNRNFQGRMGNTKGFIYLSSPAVAAYSALKGYISDPREILK 418
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_METJA (Isopropylmalate/citramalate isomerase large subunit OS=Methanocaldococcus jannaschii GN=leuC PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.806e-28 Identity = 77/209 (36.84%), Postives = 109/209 (52.15%), Query Frame = -2 Query: 273 VPADGTTFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV-KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + D T +Y+++ T P+E + DE A F Y + K+EP+ A PH+ DN ARE ID+V+IGSCT G+ ED A K+ G V + PA+++ ++ + + F + GC +PSC AC+G Y + VCVST+NRNF GR G E +IYLASP TAAA A+ G + DPR+ Sbjct: 227 IEPDEKTIQYVKEAMKKHGTERPFEVIKGDEDAEFAEVYEIEADKIEPVFACPHNVDNVKQAREVAGKPIDQVFIGSCTNGRLEDLRMAIKIIEKHGGIADDVRVVVTPASREEYLKALK--------EGIIEKFLKYGC-VVTNPSCSACMG---SLYGVLGPGEVCVSTSNRNFRGRQGSLEAEIYLASPITAAACAVKGELVDPRD 423
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_METB6 (3-isopropylmalate dehydratase large subunit OS=Methanoregula boonei (strain 6A8) GN=leuC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.108e-27 Identity = 72/203 (35.47%), Postives = 112/203 (55.17%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 VP D T++Y++ + + + SD+ A F + ++++ LEP VA PH+ D + + ID+V+IGSCT G+ ED + AA+V KV ++PA++ ++ + + F AG A P CG C+GG ++ + V ++T+NRNF GR G EG++YL SP TAAASA+ G +TDPRE Sbjct: 225 VPPDKVTWEYMKGRRKITPFALASDDDAKFAEKRTYNVADLEPQVAVPHNVDQGIPVGKVEGTHIDQVFIGSCTNGRYEDLVEAAEVLGKKKFDPKVRVLVIPASRDEYLKALEAGL--------VERFVRAGALVEA-PCCGPCMGG---SFGLIAAGEVSLATSNRNFRGRQGSTEGKVYLCSPATAAASAIKGEITDPRE 415
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CAMC5 (3-isopropylmalate dehydratase large subunit OS=Campylobacter curvus (strain 525.92) GN=leuC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.108e-27 Identity = 83/209 (39.71%), Postives = 113/209 (54.07%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + D TT ++L+ K +L EP YSDE A + KL+P++A P P N RE D+ ID+ +IGSCT G+ D AA++ G+KV T L+ PATQK+ + + + IF EAG ++P+CGACLGG CVSTTNRNF GRMG + ++YLA+ AAASA+ G + DPRE Sbjct: 227 IAVDETTREFLKGK-NLRAEPKFFYSDEGAGYERVLEIYADKLDPVIAYPFLPSNGKSVREAVKDDIAIDQAFIGSCTNGRLSDLRIAAEIL--KGRKVSRKTRLIITPATQKIAL--------AAQKEGLMDIFVEAGA-VVSNPTCGACLGGYMGILGAGER---CVSTTNRNFVGRMGDRTSEVYLANSAVAAASAIAGKIADPRE 420
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_GEOSL (3-isopropylmalate dehydratase large subunit OS=Geobacter sulfurreducens GN=leuC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.889e-27 Identity = 79/185 (42.70%), Postives = 103/185 (55.68%), Query Frame = -2 Query: 267 SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 812 SDE A + FD+S LEP+V + PD E +D+VY+GSCT G+ ED AA++ GKK+ V L PAT K++ D + IF EAG C T +P+CGACLG A E VC STTNRNF GRMG K G ++L SP T+AA+A+ G + DPR++L Sbjct: 259 SDEDAVYEQVLDFDVSSLEPIVTFGYKPDQVKPVSEIAGTPVDQVYLGSCTNGRLEDLRIAARIL--KGKKIAPTVRGILSPATPKIYQDAMR--------EGLIDIFMEAGFCVT--NPTCGACLGMSNGVLA---EGEVCASTTNRNFMGRMG-KGGMVHLMSPATSAATAIEGKIADPRKYL 427 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |