CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_THETN (3-isopropylmalate dehydratase large subunit OS=Thermoanaerobacter tengcongensis GN=leuC PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.222e-27 Identity = 74/202 (36.63%), Postives = 106/202 (52.48%), Query Frame = -2 Query: 273 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 872 D T Y++ + Y+ DE A + ++ + P VA PH P+N E VKID+V IGSCT G+ D A ++ GKKV V + PATQ+++++ + + F +AG ++P+CG CLGG A+ ++TTNRNF GRMGH E ++YLASP AAASA+ GY+ P E Sbjct: 229 DEITEAYVKKRAKREYKVFERDEDAEYSEVIEINLDDIRPQVAFPHLPENTRSIDEVGKVKIDQVVIGSCTNGRLSDMEIAYRIL--KGKKVHPDVRLIIFPATQEIYLECVK--------RGYIEEFIKAGA-AVSTPTCGPCLGGHMGVLAKGER---ALATTNRNFVGRMGHPESEVYLASPAVAAASAIAGYIVSPEE 416
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_THEP3 (3-isopropylmalate dehydratase large subunit OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=leuC PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.222e-27 Identity = 74/202 (36.63%), Postives = 106/202 (52.48%), Query Frame = -2 Query: 273 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 872 D T Y++ + Y+ D A + Y + ++ P VA PH P+N E VKID+V IGSCT G+ D A K+ GKKV V + PATQ+++++ + + F +AG ++P+CG CLGG A+ ++TTNRNF GRMGH E ++YL+SP AAASA+ GY+ P E Sbjct: 229 DEITEAYVKGRAKREYKVFERDVDAEYSEVYEISLDEIRPQVAFPHLPENTRNIDEVGKVKIDQVVIGSCTNGRISDMEIAYKIL--KGKKVHPDVRLLIFPATQEIYLECVK--------RGYIEEFIKAGA-AVSTPTCGPCLGGHMGILAKGER---ALATTNRNFVGRMGHPESEVYLSSPAVAAASAIAGYIVSPEE 416
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC1_THEMA (3-isopropylmalate dehydratase large subunit 1 OS=Thermotoga maritima GN=leuC1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.222e-27 Identity = 77/208 (37.02%), Postives = 113/208 (54.33%), Query Frame = -2 Query: 267 VPADGTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN--RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 881 +P+D T ++L+ + + +D A + +E D + LEPLV+ PH DN + E + +KID+V+IG+CT G+ +D A K+ GK V + PA++KV+MD K + F E G P CG C+G + + +ST NRNF GRMG+ +IYLASP TAAA+A+TGY+TDPR F+ Sbjct: 223 MPSDEKTREFLKKMGREEDFRELKADPDAVYETEIEIDATTLEPLVSLPHYVDNVRKVSEVEKEKIKIDQVFIGTCTNGRLQDLEIALKILEKHGKHPDVRLIVGPASRKVYMDALE--------KGIIKKFVELGAAV-IPPGCGPCVGIHMGV---LGDGERVLSTQNRNFKGRMGNPNAEIYLASPATAAATAVTGYITDPRRFI 418
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_SULNB (3-isopropylmalate dehydratase large subunit OS=Sulfurovum sp. (strain NBC37-1) GN=leuC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.376e-27 Identity = 82/213 (38.50%), Postives = 112/213 (52.58%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTS----LPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + D T YL ++ L EP YSDE A++ D+ L P++A P P N + D+KID+V IGSCT G+ ED AA++ GK+V T ++ PATQK+ M + I EAG ++P+CGACLGG + + CV+TTNRNF GRMG + +IYLA+ AAASA+ G + DPRE Sbjct: 227 IAVDNITEAYLIERAEANGGLRSEPKIHYSDEDATYCQVVTIDVENLSPVIAYPFLPSNGKPVEQAVKDDLKIDQVMIGSCTNGRIEDLRIAAEIM--KGKRVAKHTRMIVTPATQKILMQAQH--------EGLMDILIEAGA-VVSNPTCGACLGGYMGI---LGDGERCVATTNRNFVGRMGARTSEIYLANSAVAAASAIAGKIVDPRE 425
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_GEOUR (3-isopropylmalate dehydratase large subunit OS=Geobacter uraniireducens (strain Rf4) GN=leuC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.376e-27 Identity = 87/215 (40.47%), Postives = 113/215 (52.56%), Query Frame = -2 Query: 267 DGTTFKYL-----EDKTS-----LPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 872 D T YL ED S + ++ +SDE A + DIS LEP+V + PD E +D+VY+GSCT G+ ED AA++ GKK+ V L PAT KV+ D + IF EAG C T +P+CGACLG A E VC STTNRNF GRMG K G ++L SP T+AA+A+ G + DPR++L Sbjct: 229 DSVTVDYLWPFISEDYASKEAALVEFKKWWSDEDAVYERVLDLDISGLEPVVTFGYKPDQVKTITEMAGTPVDQVYLGSCTNGRLEDLRVAAEIL--KGKKIAPTVRAILSPATPKVYSDAL--------HEGLIDIFMEAGFCVT--NPTCGACLGMSNGVLA---EGEVCASTTNRNFMGRMG-KGGMVHLMSPATSAATAIEGKMADPRKYL 427
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CAMC1 (3-isopropylmalate dehydratase large subunit OS=Campylobacter concisus (strain 13826) GN=leuC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.376e-27 Identity = 80/209 (38.28%), Postives = 113/209 (54.07%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + D T ++L+DK +L +P YSDE A + D++ L+P++A P P N R+ D+ ID+ +IGSCT G+ D AA++ GKKV T L+ PATQK+ + + IF EAG ++P+CGACLGG C+STTNRNF GRMG + +IYLA+ AASA+ G + DPR+ Sbjct: 227 IAVDEITKEFLKDK-NLRDKPKFFYSDEGAKYDKILEIDVTNLDPVIAYPFLPSNGKSVRQAVRDDLAIDQAFIGSCTNGRLSDLRIAAQIL--KGKKVARKTRLIITPATQKI--------ARAAEKEGLIDIFIEAGA-VVSNPTCGACLGGYMGILGANER---CISTTNRNFVGRMGDRTSEIYLANSAVVAASAIAGKIADPRD 420
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_GEOMG (3-isopropylmalate dehydratase large subunit OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=leuC PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.225e-26 Identity = 78/185 (42.16%), Postives = 103/185 (55.68%), Query Frame = -2 Query: 267 SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 812 SD+ A + FD+S LEP+V + PD E +D+VY+GSCT G+ ED AA++ GKK+ V L PAT K++ D + IF EAG C T +P+CGACLG A E VC STTNRNF GRMG K G ++L SP T+AA+A+ G + DPR++L Sbjct: 259 SDDDAVYERVLDFDVSVLEPIVTFGYKPDQVKPISEIAGSPVDQVYLGSCTNGRLEDLRIAARIL--KGKKIAPSVRGILSPATPKIYKDAM--------AEGLIDIFMEAGFCVT--NPTCGACLGMSNGVLA---EGEVCASTTNRNFMGRMG-KGGMVHLMSPATSAATAIEGVIADPRKYL 427
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC1_ARCFU (3-isopropylmalate dehydratase large subunit 1 OS=Archaeoglobus fulgidus GN=leuC1 PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.225e-26 Identity = 77/205 (37.56%), Postives = 110/205 (53.66%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 V D TT +YL+ PYE + SDE A F E D++ +EP VA PH DN E + ++D+V+IGSCT G+ ED AA++ V ++PA+ + + + +IF +AG A P CG C+GG ++ + V VST+NRNF GR G EG+IYL +P AAA+A+ G +TDPR+ Sbjct: 226 VEPDKTTLEYLK-AMGRPYEGELLKSDEDAEF-QEVELDVTGMEPQVAAPHRVDNVVGISEVEGTRVDQVFIGSCTNGRYEDLKIAAEILKGEKVASNVRLIVIPASHREYRRALK--------EGLIEIFVDAGALVEA-PCCGPCMGG---SFGLIASGEVSVSTSNRNFIGRQGSPEGKIYLVNPAVAAATAIYGEITDPRK 416
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: HACA_METJA (Homoaconitase large subunit OS=Methanocaldococcus jannaschii GN=hacA PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.225e-26 Identity = 74/209 (35.41%), Postives = 108/209 (51.67%), Query Frame = -2 Query: 282 VPADGTTFKYLEDKTSLPYEPV---------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTD 881 + AD T+ YL+ + L E + + ++A++ E DI+ +E VA PH PDN + + +I++V+IGSCT G+ D AAK V ++PA++KV++ + IF +AG +P CG CLG + A E +C+STTNRNF GRMGH IYLASP AA SA+ GY+T+ Sbjct: 221 IEADEITYDYLKKERGLSDEDIAKLKKERITVNRDEANYYKEIEIDITDMEEQVAVPHHPDNVKPISDVEGTEINQVFIGSCTNGRLSDLREAAKYLKGREVHKDVKLIVIPASKKVFLQALK--------EGIIDIFVKAGA-MICTPGCGPCLGAHQGVLA---EGEICLSTTNRNFKGRMGHINSYIYLASPKIAAISAVKGYITN 417
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_SULDN (3-isopropylmalate dehydratase large subunit OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=leuC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.089e-26 Identity = 77/206 (37.38%), Postives = 111/206 (53.88%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 V D TT +L DK +L EP YSD AS++ D++ L+P++A P P N ++ + KD +KID+ +IGSCT G+ D AA++ V + P TQ + + L I +AG ++P+CGACLGG + + V +STTNRNF GRMG + ++YLA+ AA SA+ GY+TDPR Sbjct: 227 VAYDETTKAFLADK-NLAREPRIHYSDADASYVQILNIDVASLDPVIAYPFLPSNGHSVVQAQKDNIKIDQAFIGSCTNGRLSDLKVAAEILKGKRVHPDVRLIVTPGTQMILREANKLGY--------IDIIVDAG-GVVSNPTCGACLGGYMGI---LGDNEVAISTTNRNFVGRMGSRSSKVYLANSAVAAISAIKGYITDPR 419 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |