CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_PICTO (3-isopropylmalate dehydratase large subunit OS=Picrophilus torridus GN=leuC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.146e-24 Identity = 74/201 (36.82%), Postives = 103/201 (51.24%), Query Frame = -2 Query: 273 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 875 AD T Y+ +KT+ Y+ DE A + D S++EP VA P+SPDN + + +ID+ YIGSCT G+ ED AA + V +VPA+Q+V+ + I +AG A +CGACLGG + C+STTNRNF GRMG + ++YLA+P AASA+ G + P E Sbjct: 225 ADEKTLDYIRNKTN-DYKIYKDDENAEYSRIIDIDASEIEPSVAIPNSPDNVRPVSKVSE-RIDQAYIGSCTNGRIEDIRRAALILKDKKIDKNVRLMVVPASQEVYNQALK--------EGLVDIITDAG-GYFAGTTCGACLGGYMGV---LGPGETCISTTNRNFIGRMGDRTSRVYLANPEVVAASAIMGRIASPEE 411
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC2_PYRFU (3-isopropylmalate dehydratase large subunit 2 OS=Pyrococcus furiosus GN=leuC2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.955e-24 Identity = 68/172 (39.53%), Postives = 95/172 (55.23%), Query Frame = -2 Query: 279 FLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDP 794 ++ E +++ L PLVAKPH+P N E + KID+V+IGSCT G+ E AA++ G+KV V T + PA+ M+VY + ++ E P P CG CLG + + + +STTNRNF GRMG QIYL++P TAA SAL G +T+P Sbjct: 219 YVKELEIELNSLNPLVAKPHNPANVVPVEEVEGTKIDQVFIGSCTNGRFEQISKAAEIL--EGEKVAVRTIVGPAS----MNVYKRMIEEG---VARKLIEAGAVILP--PGCGPCLGRHMGV---VGDGEIVLSTTNRNFRGRMGSPNAQIYLSNPITAAVSALYGEITNP 376
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC2_METMA (3-isopropylmalate dehydratase large subunit 2 OS=Methanosarcina mazei GN=leuC2 PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.553e-24 Identity = 72/205 (35.12%), Postives = 108/205 (52.68%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKT-SLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + AD T YL+++ +P + SDE A +L +D+S LEP VA PH+ DN E + K+D++++GSCT G+ ED A + + +VPA++ +M + + AG A P CG C+GG ++ + V ++T+NRNF GR G E +YL+SP TA ASALTG +TDPR+ Sbjct: 227 IEADEVTEAYLKERIPGFKLDPYWKSDEGAKYLDIRYYDVSDLEPQVACPHNVDNVKPVSEVEGTKLDQIFMGSCTNGRFEDIKIMADIMGDEPVAKNLRLLVVPASKTEYMKLLKAGY--------IEKLVNAGAIVEA-PCCGPCMGG---SFGLLGPGEVGLATSNRNFKGREGSAESFVYLSSPATAGASALTGEITDPRK 419
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_PYRKO (3-isopropylmalate dehydratase large subunit OS=Pyrococcus kodakaraensis GN=leuC PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.355e-24 Identity = 68/172 (39.53%), Postives = 94/172 (54.65%), Query Frame = -2 Query: 279 FLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDP 794 ++ E D+S L P+VAKPH P N E + KID+V+IGSCT G+ E AA++ +G++V V T + PA+ V+ + + +++ +AG P CG CLG + V +STTNRNF GRMG +IYLASP TAA SAL G +T P Sbjct: 219 YVLELGIDLSSLPPMVAKPHHPSNGVPVEEVEGTKIDQVFIGSCTNGRFEQIERAAEIL--AGEEVAVRTIIGPASANVYRRMIETGI--------AKVLIDAGA-VILPPGCGPCLGRHMGV---AGDGDVILSTTNRNFRGRMGSPNSEIYLASPVTAALSALYGEITTP 376
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_PYRHO (3-isopropylmalate dehydratase large subunit OS=Pyrococcus horikoshii GN=leuC PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.355e-24 Identity = 69/173 (39.88%), Postives = 95/173 (54.91%), Query Frame = -2 Query: 279 SFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDP 797 +++ E F++S L P+VAKP SP N + + KID+V+IGSCT G+ E AA++ G++V V T + PA+ V+ + + I +AG T P CG CLG + + V +STTNRNF GRMG +IYLASP TAA SAL G +T P Sbjct: 218 NYIKEISFELSSLGPMVAKPFSPANGVEVEKVEGTKIDQVFIGSCTNGRFEHIKRAAEIL--KGEEVAVRTIIGPASVNVYKRMVR--------EGIVDILLDAGA-TILPPGCGPCLGRHMGV---LGDKEVVLSTTNRNFRGRMGSPTAEIYLASPLTAAVSALYGEITSP 376
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_HERA2 (3-isopropylmalate dehydratase large subunit OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=leuC PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.267e-23 Identity = 72/183 (39.34%), Postives = 93/183 (50.82%), Query Frame = -2 Query: 252 ASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFLE*TDQ 800 AS+ D+S LEP V+ PH DN + V +D VY+G+CT G ED AAA + V +VPA+ + +L S G + + A T +P CGAC+G A VCV T NRNF GRMG IYLASP AAA+A+TGY+T PR L+ T+Q Sbjct: 247 ASYSRVVECDLSTLEPQVSVPHYVDNVVDLADVGRVAVDVVYLGTCTNGHYEDMAAAASILKGRRLAPNVRMIVVPASSE------SLHRAASDGTLATLLAAGA---TIGTPGCGACIGRHMGVLA---PDEVCVFTGNRNFRGRMGSPGANIYLASPEVAAATAVTGYITHPRNVLDSTEQ 417
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC1_METTH (3-isopropylmalate dehydratase large subunit 1 OS=Methanobacterium thermoautotrophicum GN=leuC1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.655e-23 Identity = 69/201 (34.33%), Postives = 101/201 (50.25%), Query Frame = -2 Query: 279 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDP 881 V D T Y+ ++ P+ +D A LS D+S LEP VA PH+ DN E + +ID+V++GSCT G+ D AA + V ++PA+++V+ + +IF +AG +P CG CLGG + V +ST+NRNF GR G E ++YL+S AAASA+ G +T P Sbjct: 227 VEPDEKTLNYVRRRSGKPWRVFKTDPDAPSLSVMEVDVSDLEPQVACPHNVDNVKPVTEVEGTEIDQVFLGSCTNGRLSDLRDAAAILKNRKVSDSVRMLVIPASREVYRRAL--------DEGLIEIFVDAGA-LVCNPCCGPCLGG---HVGLVGPGEVSLSTSNRNFRGRQGSPEAEVYLSSAAVAAASAVKGSITHP 415
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_DESDG (3-isopropylmalate dehydratase large subunit OS=Desulfovibrio desulfuricans (strain G20) GN=leuC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.161e-23 Identity = 69/201 (34.33%), Postives = 98/201 (48.76%), Query Frame = -2 Query: 276 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 878 P+D T Y + E + +D+ A + FD+S L P +A PH P+N E + V+I + IGSCT G+ D AA V V ++PAT +W + + F +AGC +CG CLGG A + ++TTNRNF GRMG E ++YL++P AAASA+ G + DPR Sbjct: 229 PSDDLTLAYTAARGRND-EKLSADQDAVYERSLSFDVSDLAPQIACPHLPENVRPVTEVQGVQIHQAVIGSCTNGRISDLREAAAVLRGRKVHKSVRCIVLPATPGIWKQALR--------EGLIETFMDAGC-IVGPATCGPCLGGHMGILA---DGERAIATTNRNFRGRMGSLESEVYLSNPSVAAASAVAGEIADPR 416
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_DESDA (3-isopropylmalate dehydratase large subunit OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=leuC PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23 Identity = 71/184 (38.59%), Postives = 96/184 (52.17%), Query Frame = -2 Query: 279 EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDP 824 E + +D A + +++ EP+VA PH P N E +D I +V IGSCT G+ D AA+V G+KV V ++P+T VW + ++F EAGC S +CG CLGG + + V+TTNRNF GRMG ++YLASP AAASA+TGYV P Sbjct: 248 ENMAADSGAVYERVVDMNVTGKEPVVACPHLPSNVKPVSEVRDTAIQQVVIGSCTNGRISDMRDAAEVL--RGRKVDKGVRCIVLPSTPTVWKQCLR--------EGLIEVFMEAGCIVGPS-TCGPCLGGHMGI---LGDGERAVATTNRNFRGRMGSLSSEVYLASPLVAAASAVTGYVAGP 417
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC1_DEIRA (3-isopropylmalate dehydratase large subunit 1 OS=Deinococcus radiodurans GN=leuC1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23 Identity = 74/193 (38.34%), Postives = 99/193 (51.30%), Query Frame = -2 Query: 273 VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCD-----------TPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 818 VY DE A++ E D+S L P ++ P DN E + +K+D+V+IG+CT G+ ED AAA+V G++V T L L +P S SQ+ EEA D +P CG C+G + A VCVST+NRNF GRMG K+ IYLASP AAA+A+ G V P + Sbjct: 257 VYPDEGAAYAREVEIDLSALHPRMSAPSEVDNVHDVAELRGLKVDQVFIGTCTNGRIEDLHAAAEVL--RGRRVDPTTRL-------------LVIPAS-----SQVMEEALQDGTLLTLQRAGAVLGTPGCGPCMGRHQGVLA---PGEVCVSTSNRNFIGRMGDKDAHIYLASPAVAAATAVMGRVALPED 426 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |