CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC2_PYRAB (3-isopropylmalate dehydratase large subunit 2 OS=Pyrococcus abyssi GN=leuC2 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.289e-23 Identity = 70/176 (39.77%), Postives = 95/176 (53.98%), Query Frame = -2 Query: 279 EKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDP 806 E + E ++ L P+VAKP SP N + + KID+V+IGSCT G+ E AA++ G++V V T + PA+ V+ + + +I +AG P CG CLG A NE V +STTNRNF GRMG + +IYLASP TAA SAL G +T+P Sbjct: 215 EGGGYSDEITIELDSLPPMVAKPFSPANGVSVEDVEGTKIDQVFIGSCTNGRFEQIKRAAEIL--DGEQVNVRTLVAPASINVYRRMIE--------EGLVRILIDAGV-VILPPGCGPCLGRHMGV-AGDNE--VILSTTNRNFRGRMGSPKAEIYLASPVTAAVSALYGEITNP 376
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_MYCS2 (3-isopropylmalate dehydratase large subunit OS=Mycobacterium smegmatis GN=leuC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.214e-23 Identity = 72/217 (33.18%), Postives = 109/217 (50.23%), Query Frame = -2 Query: 273 VPADGTTFKY-------LEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA-RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG------GPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + AD +TF Y +D YEP ++D A++ + D+S L P VA+P + ++ E + KID+ +IGSC G+ +D AA++ V + PA+Q+V+ D L Q +AG S +CGAC G GP + VC++++ RNF GRMG E +IY+ASP T AASA+ G++TD R+ Sbjct: 214 ISADFSTFAYDDVLAEHFDDLGITSYEPAHADPDAAYAAVREIDLSALAPYVARPGTVSRNGVSVDEVEPRKIDQAFIGSCANGQLDDLRIAAEILRGRRVAPGVRLIVTPASQQVYRDAMRLGY--------LQDIADAGAVITNS-TCGACFGYHMGVVGPGE---------VCLTSSTRNFTGRMGSTEAEIYMASPATVAASAVAGHITDARK 412
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_DESOH (3-isopropylmalate dehydratase large subunit OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=leuC PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.549e-21 Identity = 76/187 (40.64%), Postives = 96/187 (51.34%), Query Frame = -2 Query: 276 YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 827 ++ + SD A + DIS L P V + PD E + ID+VYIGSCT G+ ED AAKV GKKV V + PAT V+ + F AG C T +P+CGACLG A VC+STTNRNF GRMG K G ++LASP TAAA A+ G +T+ + Sbjct: 254 FKKLVSDPDADYDRVLEMDISDLSPRVTYGYKPDCVKPVAEMEGTPIDQVYIGSCTNGRLEDLRVAAKVL--KGKKVHPSVRGIVSPATPTVFQAALE--------EGLIATFMAAGFCVT--NPTCGACLGMSNGVLA---PGEVCLSTTNRNFNGRMG-KGGMVHLASPATAAAGAIAGCITNSK 424
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC2_METTH (3-isopropylmalate dehydratase large subunit 2 OS=Methanobacterium thermoautotrophicum GN=leuC2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.642e-21 Identity = 63/197 (31.98%), Postives = 95/197 (48.22%), Query Frame = -2 Query: 273 TFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 863 T Y+ +T + SDE + +L ++ FD+S LEP VA P DN + ID ++GSCT G+ ED AA+V V + PA++++++ + + F AG +P CG CLG A V ++TTNRNF GRMG +YLA+P A SA+ G ++ P++ Sbjct: 238 TLDYVRARTGREFRVYSSDEDSQYLEDHHFDVSDLEPQVACPDDVDNVYPVHRVEGTHIDEAFLGSCTNGRYEDLKIAAEVIGDRRVHEDVRFIVSPASREIYLKALEDGI--------IETFIRAGA-IVCNPGCGPCLGAHMGVLA---PGEVSIATTNRNFRGRMGDPASSVYLANPAVVAESAIEGVISAPQQ 422
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_OCHA4 (3-isopropylmalate dehydratase large subunit OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=leuC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.507e-21 Identity = 84/253 (33.20%), Postives = 115/253 (45.45%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D TTF Y++DK P ++ ++SDE A F D +K+ P+V+ SP++ RAL + D+KIDRV+IGSCT G+ ED AA+ +A+GKKV V + VPGSG + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 236 IAPDETTFAYVQDKPRAPKGEALEQAISYWKTLHSDEGAHFDKIVELDAAKISPVVSWGSSPEDVVFVTDIVPNPDEIKDETKRASKWRALDYMGLKPGTKMTDIKIDRVFIGSCTNGRIEDLRDAAR--MAAGKKVAA-------------GVNAMIVPGSGLVKEQAEAEGLDKIFIEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIREW 468
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_ANADE (3-isopropylmalate dehydratase large subunit OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=leuC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.311e-20 Identity = 80/248 (32.26%), Postives = 112/248 (45.16%), Query Frame = -2 Query: 264 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP---------------DNRALARECKDV----------------KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFLE 881 V D TTF++L + P + + SDE A++ E R D S LEP++ +P + A AR + K+D V+IGSCT G+ ED AA+V G+KV+ T +VP + +V D + + ++ EAG + P C C+ D + CVST+NRNF GR G G+ LASP TAAA+A+TG V DPR LE Sbjct: 246 VAPDDTTFQWLAGRPRAPKGAAWDEAVARWRALPSDEGATYDRELRLDASALEPMITFGTNPGQGIAVTGLVPDPAAERDASARTTLEAALRYMGLVPGKPIAGQKVDVVFIGSCTNGRIEDMREAARVL--KGRKVRTRTLVVPGSHRVKKD--------AEAEGIDRVVREAGAEW-REPGCSMCIAMNGDD---IRAGQYCVSTSNRNFEGRQG-PGGRTLLASPLTAAAAAVTGAVADPRRVLE 478
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_ANASK (3-isopropylmalate dehydratase large subunit OS=Anaeromyxobacter sp. (strain K) GN=leuC PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.713e-20 Identity = 80/248 (32.26%), Postives = 112/248 (45.16%), Query Frame = -2 Query: 264 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP---------------DNRALARECKDV----------------KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFLE 881 V D TTF++L + P + + SDE A++ E R D + LEP++ +P + A AR + K+D V+IGSCT G+ ED AA+V G+KV+ T +VP + +V D + + +I EAG + P C C+ D + CVST+NRNF GR G G+ LASP TAAA+A+TG V DPR LE Sbjct: 246 VAPDDTTFEWLAGRPRAPKGAAWDEAVARWRALPSDEGATYDRELRLDAAALEPMITFGTNPGQGIAVTGLVPDPVAERDASARATLEAALRYMGLVPGKPIAGQKVDVVFIGSCTNGRIEDMREAARVL--KGRKVRTRTLVVPGSHRVKKD--------AEAEGIDRIVREAGAEW-REPGCSMCIAMNGDN---IQAGQYCVSTSNRNFEGRQG-PGGRTLLASPLTAAAAAVTGAVADPRRVLE 478
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_ANAD2 (3-isopropylmalate dehydratase large subunit OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=leuC PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.921e-20 Identity = 79/248 (31.85%), Postives = 112/248 (45.16%), Query Frame = -2 Query: 264 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP---------------DNRALARECKDV----------------KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFLE 881 V D TTF++L + P + + SD+ A++ E R D + LEP++ +P + A AR + K+D V+IGSCT G+ ED AA+V G+KV+ T +VP + +V D + + +I EAG + P C C+ D + CVST+NRNF GR G G+ LASP TAAA+A+TG V DPR LE Sbjct: 246 VAPDDTTFEWLAGRPRAPKGAAWDEAVARWRALPSDDGATYDRELRLDAAALEPMITFGTNPGQGIAVTGLVPDPVAERDASARATLEAALRYMGLVPGKPIAGQKVDVVFIGSCTNGRIEDMREAARVL--KGRKVRTRTLVVPGSHRVKKD--------AEAEGIDRIVREAGAEW-REPGCSMCIAMNGDN---LQAGQYCVSTSNRNFEGRQG-PGGRTLLASPLTAAAAAVTGAVADPRRVLE 478
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC2_METKA (3-isopropylmalate dehydratase large subunit 2 OS=Methanopyrus kandleri GN=leuC2 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.508e-20 Identity = 62/170 (36.47%), Postives = 89/170 (52.35%), Query Frame = -2 Query: 267 DISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLA-SGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 773 D S++EP+V+ PH D+ + + V++ RV++GSCT G+ D ++ G V +VPA+++V L G T I A P CG CLG + + + VCVST NRNFPGRMG + +IYLASP TAA +A G + DP++ L Sbjct: 244 DASEVEPVVSVPHRVDDVRPVGDVQGVEVTRVFVGSCTNGRYRDVRVFTEILEELDGPHPDVRIVVVPASRRV------LERMTEAGLTLKLIRMGVMI---APPGCGPCLG---EHLGVLGDDDVCVSTANRNFPGRMGSRRAEIYLASPVTAAVAAAEGELVDPQDVL 401
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC2_BRAJA (3-isopropylmalate dehydratase large subunit 2 OS=Bradyrhizobium japonicum GN=leuC2 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.500e-20 Identity = 82/253 (32.41%), Postives = 111/253 (43.87%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP-----------DNRALARECK--------------------DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 V D + +L D+ P +E + SD+ A F E R D +KL P+V SP D +A E K D+K+DRV+IGSCT G+ ED AAAK+ A GK+V V + VPGSG + +IF +AG + P C CL D ++ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 235 VAPDQKAYDFLRDRPKAPKGAAWDAAMRYWEKLRSDDGAHFDHELRLDAAKLPPIVTWGTSPEDVISVTGIVPDPDKIADEAKRLSKHRALKYMGLTAGTKITDIKLDRVFIGSCTNGRIEDLRAAAKI--AEGKQVSA-------------SVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCLAMNPD---KLKPEERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDVREW 467 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |