CB290762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.745e-31 Identity = 63/131 (48.09%), Postives = 92/131 (70.23%), Query Frame = -3 Query: 377 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 769 +GFNV+ V+ KD++RG VA + D+P +FT+Q++++ HP I GY PV+ HT+ IA +F EL KID R+G+ E+ P+FLK GDA +VK+ PT+PMV+E D PP+GRFA+RDM T+ G++ Sbjct: 287 IGFNVRGVSKKDIRRGDVAGHP-DNPPTVVKDFTAQLVVLQHPTAITVGYTPVVHAHTAQIACRFVELQKKIDPRTGQVKEENPQFLKTGDAAIVKLEPTRPMVIERVKDIPPMGRFAIRDMGMTIGAGMV 416
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.279e-31 Identity = 63/140 (45.00%), Postives = 96/140 (68.57%), Query Frame = -3 Query: 356 VGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 769 +GFNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT+ +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTK MV+E + P +GRFA+RDM QTVA G++ S++K + Sbjct: 289 IGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.076e-31 Identity = 64/138 (46.38%), Postives = 94/138 (68.12%), Query Frame = -3 Query: 356 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 769 +GFNV+ V KD+KRG V ++ + P A +FT+Q++++ HP + +GY PV HT+ IA F+E+ K++ +G+ LE+ P FLK GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 291 IGFNVRGVGKKDIKRGDVLGHTTNPPT-VATDFTAQIVVLQHPSVLTDGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.076e-31 Identity = 61/135 (45.19%), Postives = 95/135 (70.37%), Query Frame = -3 Query: 365 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 769 +GFNV+ ++ KD++RG VA + D P A FT+++ ++ HP I GY PV+ HT+ IA + +E+ K+D R+G+ +EK P+FLK GDA +VK P KPMV+E +S++P LGRFA+RDM +T+ +G++ V+ Sbjct: 297 IGFNVRGISKKDIRRGDVAGHV-DKPPTVAEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDVK 430
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.659e-31 Identity = 63/135 (46.67%), Postives = 96/135 (71.11%), Query Frame = -3 Query: 365 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 769 +GFNV+ V+ +D++RG VA + D+P A FT++V I+ HP I GY PV+ HT+ +A + E+ K+D R+GK +E+ P+F+K GDA +V+ P KP+VVE +SD+PPLGRFA+RDM +T+ +GV+ V+ Sbjct: 296 IGFNVRGVSKRDIRRGDVAGHL-DNPPTVAEEFTARVFIIWHPTAITVGYTPVIHIHTASVASRIVEIKAKLDPRTGKVVEENPQFIKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDVK 429
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.659e-31 Identity = 63/130 (48.46%), Postives = 90/130 (69.23%), Query Frame = -3 Query: 380 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 769 +GFNV+ V D++RG VA + D+P + A FT+Q++++ HPG I GY PV CHT+ +A F ELV K++ +G+ E+ P FLK G+A +VK+ PTKP+V+E D P +GRFA+RDM QTVA G+ Sbjct: 277 IGFNVRGVGKNDIRRGDVAGHL-DNPPKVAKEFTAQIVVLQHPGVITVGYTPVFHCHTAQVACTFLELVQKMNPATGQVEEENPDFLKTGNAAVVKVKPTKPLVIEKIKDIPHMGRFAIRDMGQTVAAGM 405
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.131e-30 Identity = 66/137 (48.18%), Postives = 90/137 (65.69%), Query Frame = -3 Query: 359 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 769 VGFNV+ +A D++RG V ++ P A FT+QV+++ HP + GY PV CHTS A F+EL K+D RSG+ E+ P FLK GDA + + PT+P+V+ET + P LGRFAVRDM TVA G++ SV+ K Sbjct: 287 VGFNVRGIAKNDVRRGDVCGPIENPPT-VAEEFTAQVVVLQHPSVLSVGYTPVFHCHTSQTACMFTELNKKLDPRSGQVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRDMGMTVAAGLVLSVKAK 422
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.477e-30 Identity = 64/138 (46.38%), Postives = 93/138 (67.39%), Query Frame = -3 Query: 356 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 769 +GFNV+ V KD+KRG V ++ + P A +FT+Q++++ HP + GY PV HT+ IA F+E+ K++ +G+ LE+ P FLK GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 291 IGFNVRGVGKKDIKRGDVLGHTTNPPT-VATDFTAQIVVLQHPSVLTVGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.519e-30 Identity = 63/137 (45.99%), Postives = 90/137 (65.69%), Query Frame = -3 Query: 359 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 769 +GFNV+ +A D+KRG V + D P FT+Q+I++NHP I GY PV HT+ +A + E+V ++ + G L+++P F+KNGD +VK+IP KP+V+E S+ P LGRFAVRDM QTVA G +EK+ Sbjct: 289 IGFNVRGIAKNDIKRGDVCGHL-DTPPTVVKAFTAQIIVLNHPSVIAPGYKPVFHVHTAQVACRIDEIVKTLNPKDGTTLKEKPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.519e-30 Identity = 64/130 (49.23%), Postives = 85/130 (65.38%), Query Frame = -3 Query: 380 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 769 +GFNV+ V D++RG VA + D PA A F +Q++++ HPG I GY PV CHTS +A F EL K+D +G+ E+ P FLK G+A VK+ PTKPMV+E P +GRFA+RDM QTVA G+ Sbjct: 277 IGFNVRGVGKNDIRRGDVAGHVDDAPA-VAKEFDAQIVVLQHPGVITVGYTPVFHCHTSQVACTFLELTAKLDPATGQVAEENPDFLKTGNAAFVKVKPTKPMVIENAKKIPQMGRFAIRDMGQTVAAGL 405 The following BLAST results are available for this feature:
BLAST of CB290762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290762 ID=CB290762; Name=CB290762; organism=Citrus sinensis; type=EST; length=771bpback to top |