CB290762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.805e-28 Identity = 59/135 (43.70%), Postives = 93/135 (68.89%), Query Frame = -3 Query: 365 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 769 VG NV+ + +D+KRG V + P ++++++ HP IG GYAPV+ HT+ + V+ +EL++K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FSD+PPLGRFA+RDM +T+A G I V+ Sbjct: 304 VGVNVRGINKEDVKRGDVLGKVDNIPT-VTEEIIARIVVLWHPTAIGPGYAPVMHIHTATVPVQITELISKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.805e-28 Identity = 62/138 (44.93%), Postives = 89/138 (64.49%), Query Frame = -3 Query: 356 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 769 VGFNV+ V KD+K+G V + + P A FT+Q++++ HP + GY PV HT+ +A F EL K++ +G+ E+ P FLK GDA +VK++PTKPMV+E + P LGRFA+RDM TVA G+ V+ K+ Sbjct: 291 VGFNVRGVGKKDIKKGDVLGHPDNIPT-VAEEFTAQIVVLQHPSVMTVGYTPVFHAHTAQVACTFMELQKKLNPATGEVKEENPDFLKAGDAAIVKIMPTKPMVIENVKEIPQLGRFAIRDMGMTVAAGMCIDVKAKN 427
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.358e-28 Identity = 60/130 (46.15%), Postives = 85/130 (65.38%), Query Frame = -3 Query: 380 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 769 VGFNV+ V D+KRG VA +++ P+ A F +Q++++ HPG + GY PV HT+ +A F L K+D +G+ E+ P FLK GDA +V + PTKPMV+E + P +GRFA+RDM QTVA G+ Sbjct: 277 VGFNVRGVGKNDIKRGDVAGTTQNPPS-VAKEFKAQIVVLQHPGVMTVGYTPVFHAHTAQVACTFLSLDVKLDPATGQPKEENPDFLKTGDAALVTIKPTKPMVIENIKEIPHMGRFAIRDMGQTVAAGM 405
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_METMA (Elongation factor 1-alpha OS=Methanosarcina mazei GN=tuf PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.961e-28 Identity = 59/137 (43.07%), Postives = 88/137 (64.23%), Query Frame = -3 Query: 359 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 769 +G+NV+ + D++RG V ++ D+P + A F Q++++ HP I GY PV HTS IA + L K+D ++G+ E+ P FLK GDA +V + PTKPMV+E + P LGRFA+RDM T+A G+ SV++K Sbjct: 287 IGWNVRGIGKNDVRRGDVCGHA-DNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIALNKKLDPKTGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_METAC (Elongation factor 1-alpha OS=Methanosarcina acetivorans GN=tuf PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.170e-27 Identity = 58/137 (42.34%), Postives = 88/137 (64.23%), Query Frame = -3 Query: 359 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 769 +G+NV+ + D++RG V ++ D+P + A F Q++++ HP I GY PV HTS IA + L K+D ++G+ E+ P F+K GDA +V + PTKPMV+E + P LGRFA+RDM T+A G+ SV++K Sbjct: 287 IGWNVRGIGKNDVRRGDVCGHT-DNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLISLDKKLDPKTGQVKEEHPTFIKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.170e-27 Identity = 74/157 (47.13%), Postives = 100/157 (63.69%), Query Frame = -3 Query: 356 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL-------------EKEPK------FLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 769 VGFNVK + VKD+KRG V ++K+DP F + VII +H I NGY PVLDCHT+HIA KF+ +++K D+R GK+ + EP+ K G++ V + PTK MVVE +S Y PLGRFAVRDM++TVAVGVI+ V+ ++ Sbjct: 325 VGFNVK-LTVKDIKRGDVCGDTKNDPPIPTECFLANVIIQDHKN-IRNGYTPVLDCHTAHIACKFASILSKKDKR-GKQTHDVSDDTEWATKDDAEPRNNRMNIAAKTGESVNVWLQPTKAMVVEAYSMYSPLGRFAVRDMKKTVAVGVIQCVQPRN 478
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.996e-27 Identity = 59/135 (43.70%), Postives = 93/135 (68.89%), Query Frame = -3 Query: 365 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 769 +G NV+ ++ +D++RG V + P A ++V+I+ HP IG GYAPV+ HT+ + V+ ELV+K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FS++P LGRFA+RDM +T+A G I V+ Sbjct: 304 IGVNVRGISKEDVRRGDVLGKVDNVPT-VAEEIVARVVILWHPTAIGPGYAPVMHIHTATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSEFPALGRFALRDMGRTIAAGQIIEVK 437
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.996e-27 Identity = 56/136 (41.18%), Postives = 87/136 (63.97%), Query Frame = -3 Query: 362 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 769 +GFNV+ +A +LKRG V + + P FT+Q++++NHP I GY PV HT+ +A + E+V I+ + G L+++P F+K GD +VK++P + +V+E S++P LGRFA+RDM TVA G +EK Sbjct: 289 IGFNVRGIAKNELKRGDVCGPANNPPT-VVKGFTAQIVVLNHPSVIAAGYKPVFHVHTAQVACRIDEIVKTINPKDGTTLKEKPDFIKTGDIAIVKVVPDRALVIEKVSEFPQLGRFAIRDMGMTVAAGQCIDLEK 423
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.447e-27 Identity = 57/135 (42.22%), Postives = 90/135 (66.67%), Query Frame = -3 Query: 365 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 769 +GF V+ V+ D+KRG VA + D P A F +++ ++ HP I GY PV+ HT+ ++ + E+ K+D ++G+ +E+ P+FLK GDA +V+ P KP+VVE FS+ P LGRFA+RDM +TV +G++ V+ Sbjct: 295 IGFAVRGVSKSDIKRGDVAGHL-DKPPTVAEEFEARIFVIWHPSAITVGYTPVIHVHTASVSSRIIEIKAKLDPKTGQVVEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDVK 428
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_HALMA (Elongation factor 1-alpha OS=Haloarcula marismortui GN=tuf PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.690e-26 Identity = 58/137 (42.34%), Postives = 83/137 (60.58%), Query Frame = -3 Query: 359 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 769 VGFNV+ V D++RG V + DDP A F +Q+++M HP I GY PV HT+ +A + KID SG+ E+ P F++NGDA +V + P KP+ +E S+ P LG FA+RDM QT+A G + V ++ Sbjct: 286 VGFNVRGVGKDDIRRGDVCGPA-DDPPSVAETFQAQIVVMQHPSVITEGYTPVFHAHTAQVACTVESIDKKIDPSSGEVAEENPDFIQNGDAAVVTVRPQKPLSIEPSSEIPELGSFAIRDMGQTIAAGKVLGVNER 421 The following BLAST results are available for this feature:
BLAST of CB290762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290762 ID=CB290762; Name=CB290762; organism=Citrus sinensis; type=EST; length=771bpback to top |