CB290763

Overview
NameCB290763
Unique NameCB290763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.667e-52
Identity = 99/221 (44.80%), Postives = 147/221 (66.52%), Query Frame = 3
Query:   75 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD--WYKGPTLLDALDNI 731
            K H++I+ +GHVD+GKST  G+L++  G +DKR +E++E+EA +  ++ +  +W++D  K ER  G TI++    FET K   T++DAPGH+ +I  MI G SQAD  VL+I S  G +EAG  + GQ+REHA+LA T GV +++   NKMD  T  +SK RY+E   +++ YLK VGY    V F+P+SG+ G  + ER +  D  WY GP+LL+ LD++
Sbjct:  316 KDHMSIIFMGHVDAGKSTMGGNLLFLTGAVDKRTVEKYEREAKDAGRQGWYLSWIMDTNKEERNDGKTIEVGKSYFETDKRRYTILDAPGHKLYISEMIGGASQADVGVLVISSRKGEYEAGFERGGQSREHAILAKTQGVNKLVVVINKMDDPTVNWSKERYEECTTKLAMYLKGVGYQKGDVLFMPVSGYTGAGLKERVSQKDAPWYNGPSLLEYLDSM 536          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 2.843e-52
Identity = 97/222 (43.69%), Postives = 146/222 (65.77%), Query Frame = 3
Query:   75 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD--WYKGPTLLDALDNIN 734
            K H++I+ +GHVD+GKST  G+++Y  G +DKR +E++E+EA +  ++ +  +WV+D  K ER  G TI++    FET K   T++DAPGH+ ++  MI G SQAD  +L+I +  G +E G  K GQTREHALLA T GV ++I   NKMD  T  +SK RY E   ++  +LK +GYN + +  +P+SG+ G  + +R    D  WY+GP+LL+ LDN++
Sbjct:  287 KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETDKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKIIVVVNKMDDPTVNWSKERYQECTTKLGVFLKGIGYNKDDIINMPVSGYTGAGLKDRVNPKDCPWYEGPSLLEYLDNMD 508          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: ERF3_CANAL (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida albicans GN=SUP35 PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.849e-52
Identity = 96/222 (43.24%), Postives = 147/222 (66.22%), Query Frame = 3
Query:   75 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD--WYKGPTLLDALDNIN 734
            K H++I+ +GHVD+GKST  G+++Y  G +DKR +E++E+EA +  ++ +  +WV+D  K ER  G TI++    FET K   T++DAPGH+ ++  MI G SQAD  +L+I +  G +E G  K GQTREHALLA T GV ++I   NKMD +T  +SK RY E   ++ ++LK +GY  + + ++P+SG+ G  + +R    D  WY GP+LL+ LDN++
Sbjct:  290 KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETDKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKIIVVVNKMDDSTVGWSKERYQECTTKLGAFLKGIGYAKDDIIYMPVSGYTGAGLKDRVDPKDCPWYDGPSLLEYLDNMD 511          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: HBS1_SCHPO (Elongation factor 1 alpha-like protein OS=Schizosaccharomyces pombe GN=hbs1 PE=2 SV=4)

HSP 1 Score: 203.371 bits (516), Expect = 1.080e-51
Identity = 105/225 (46.67%), Postives = 145/225 (64.44%), Query Frame = 3
Query:   75 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIERSTN--LDWYKGPTLLDALDNINEP 740
            K  +++VV GHVDSGKST  G ++++LG I+ R +++   EAA   K SF YAW+LD  + ER RG+T+D+A   FE+ K    + DAPGHRDFI  MI G S AD AVL++DS+   FE G  ++GQTREHA L   LG+ +++   NK+D  +  +S+ R+ EI   VS +L K VG+    V FVPIS   G N+I++ ++    WYKGPTLL ALD +  P
Sbjct:  175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQKDSSDLYKWYKGPTLLSALDQLVPP 397          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: ERF3_SCHPO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Schizosaccharomyces pombe GN=sup35 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 4.105e-51
Identity = 99/223 (44.39%), Postives = 150/223 (67.26%), Query Frame = 3
Query:   75 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV-GYNPE-KVPFVPISGFEGDNMIER--STNLDWYKGPTLLDALDNI 731
            K H+NIV IGHVD+GKST  G++++  G +DKR +E+ E+EA E  K S+  +W LD    ERE+G T+++    FET     +++DAPGH+ ++ NMI G SQAD  VL+I +  G FEAG  + GQTREHA+LA T G+  ++   NKMD  + ++S+ RY E V ++S +L++V GYN +  V ++P+S + G N+ +R  S+   WY+GP+LL+ LD++
Sbjct:  236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNVKDRVDSSVCPWYQGPSLLEYLDSM 458          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: ERF3_DEBHA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Debaryomyces hansenii GN=SUP35 PE=3 SV=4)

HSP 1 Score: 200.29 bits (508), Expect = 9.145e-51
Identity = 93/221 (42.08%), Postives = 146/221 (66.06%), Query Frame = 3
Query:   75 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD--WYKGPTLLDALDNI 731
            K H++I+ +GHVD+GKST  G+++Y  G +DKR ++++E+EA +  ++ +  +WV+D  K ER  G TI++    FET K   T++DAPGH+ ++  MI G SQAD  +L+I +  G +E G  K GQTREHALLA T GV ++I   NKMD  T  +++ RY + + ++ ++LK +GY  + + F+P+SG+ G  + +R    D  WY GP+LL+ LDN+
Sbjct:  276 KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVDKYEREAKDAGRQGWYLSWVMDTNKEERSDGKTIEVGKAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKIIVVVNKMDDPTVGWAEDRYKDCITKLGTFLKGIGYAKDDIIFMPVSGYTGAGIKDRVNPKDCPWYSGPSLLEFLDNM 496          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: HBS1_YEAST (Elongation factor 1 alpha-like protein OS=Saccharomyces cerevisiae GN=HBS1 PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.661e-50
Identity = 95/219 (43.38%), Postives = 143/219 (65.30%), Query Frame = 3
Query:   81 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNM--IERSTNL-DWYKGPTLLDALDN 728
            H++ VV+GHVD+GKST  G L+Y L  +++  + + ++E+  M K SFK+AW++D+   ERERG+T+ I    F T +   T++DAPGHRDF+ N I G SQAD A+L +D +T  FE+G   DGQT+EH LLA +LG+  +I   NKMD     +S+ R++EI  ++  YL  +G+  + + +VPISGF G+ +  IE +  +  WY GP L+  L+N
Sbjct:  167 HLSFVVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERGVTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDCSTNAFESGFDLDGQTKEHMLLASSLGIHNLIIAMNKMD--NVDWSQQRFEEIKSKLLPYLVDIGFFEDNINWVPISGFSGEGVYKIEYTDEVRQWYNGPNLMSTLEN 383          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: ERF3_DICDI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Dictyostelium discoideum GN=erf3 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.742e-50
Identity = 99/223 (44.39%), Postives = 149/223 (66.82%), Query Frame = 3
Query:   75 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK-VPFVPISGFEGDNMIERSTN--LDWYKGPTLLDALDNIN 734
            + H+NIV +GHVD+GKST +G ++   G +D   + ++E+EA E ++  + YA+++D  + ER +G T+++    FETTK   T++DAPGHR ++ NMI G +QAD  +L+I S  G FEAG+ + GQT EHA LA  +G+K ++   NKMD  T K+SKARYDEI  +++ +LKK G+NP+K   FVP SG+   N++        DWY GP+L+  LDN++
Sbjct:  115 REHLNIVFLGHVDAGKSTLSGSIMVLTGQVDPHTLAKYEREAKENHREGWIYAYIMDTNEEERTKGKTVEVGRAHFETTKKRYTILDAPGHRLYVPNMIIGAAQADVGILVISSKKGEFEAGV-EGGQTIEHARLAKMIGIKYLVVFVNKMDEPTVKWSKARYDEITDKLTVHLKKCGWNPKKDFHFVPGSGYGTLNVLAPLAPGVCDWYSGPSLIGTLDNLS 336          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1A_EIMBO (Elongation factor 1-alpha (Fragment) OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.850e-44
Identity = 87/123 (70.73%), Postives = 101/123 (82.11%), Query Frame = 3
Query:  375 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP-KYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEP 740
            GTSQAD A+L++ +  GGFE   SK+GQTREHALLAFTLGVKQMI   NKMDATTP KYS+ R++EI  EVS YLK VGYNPEKVPFVPISGF GDNM+ERS+N+ WYKG  L++ALDN+  P
Sbjct:    1 GTSQADVALLVVPADQGGFEGAFSKEGQTREHALLAFTLGVKQMIVGINKMDATTPDKYSETRFNEIQAEVSRYLKTVGYNPEKVPFVPISGFMGDNMVERSSNMPWYKGKILVEALDNVEPP 123          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1A_ENCCU (Elongation factor 1-alpha OS=Encephalitozoon cuniculi GN=TEF1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.348e-44
Identity = 87/209 (41.63%), Postives = 132/209 (63.16%), Query Frame = 3
Query:   75 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG 701
            K  +N   IGHVDSGKSTT G L Y+LG +DKR +E++EKEAA  NK +F  A++ DK  AER+RGITI   L    T K+   ++D PGH+DF+KNM+TG SQAD AV+I+ ++  GFE+ +   G  + H +++  LG +++I C NKMD         +++E+  E+   +K+  +  +    +PIS F+G N+ ++    +W+KG
Sbjct:   44 KPRLNACFIGHVDSGKSTTVGMLSYQLGAVDKREMEKYEKEAALNNKETFYLAYLTDKTDAERKRGITITTTLVNLPTEKFNINILDCPGHKDFVKNMVTGASQADVAVVIVPAS--GFESCVGVGGMLKTHIMISGILGCEKLIVCVNKMDEIPENKRMEKFNEVSAEMLRIVKR-SHKDKNPIIIPISAFKGINLTKKGEKFEWFKG 249          
The following BLAST results are available for this feature:
BLAST of CB290763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ERF3_PICPI1.667e-5244.80Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_CANMA2.843e-5243.69Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_CANAL4.849e-5243.24Eukaryotic peptide chain release factor GTP-bindin... [more]
HBS1_SCHPO1.080e-5146.67Elongation factor 1 alpha-like protein OS=Schizosa... [more]
ERF3_SCHPO4.105e-5144.39Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_DEBHA9.145e-5142.08Eukaryotic peptide chain release factor GTP-bindin... [more]
HBS1_YEAST2.661e-5043.38Elongation factor 1 alpha-like protein OS=Saccharo... [more]
ERF3_DICDI7.742e-5044.39Eukaryotic peptide chain release factor GTP-bindin... [more]
EF1A_EIMBO2.850e-4470.73Elongation factor 1-alpha (Fragment) OS=Eimeria bo... [more]
EF1A_ENCCU6.348e-4441.63Elongation factor 1-alpha OS=Encephalitozoon cunic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dd09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dd09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290763 ID=CB290763; Name=CB290763; organism=Citrus sinensis; type=EST; length=740bp
GGTCGGCGAGAGAGAAACCTTTTAGCAAATTTCATATCAAGGTTTTATAC
TAGATTTGCATAATGGGTAAGGAGAAGACTCACATCAACATTGTGGTCAT
CGGCCATGTCGACTCTGGAAAGTCGACCACCACCGGACACTTGATCTACA
AGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCT
GCTGAGATGAACAAGAGGTCATTCAAATACGCCTGGGTGCTCGACAAGCT
CAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGT
TCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCCGGACATCGT
GACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGCCGT
CCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCAAGG
ATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAG
CAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTACTC
AAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGAAGA
AGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTTC
GAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAAGGG
TCCAACCCTGCTGGACGCTCTTGACAATATCAATGAGCCG
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