CB290763

Overview
NameCB290763
Unique NameCB290763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EFTU_STRPC (Elongation factor Tu OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=tuf PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 71/204 (34.80%), Postives = 102/204 (50.00%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIE 671
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD   E
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSSVNQPK---DYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDTKFE 189          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EFTU_STRP6 (Elongation factor Tu OS=Streptococcus pyogenes serotype M6 GN=tuf PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 71/204 (34.80%), Postives = 102/204 (50.00%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIE 671
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD   E
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSSVNQPK---DYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDTKFE 189          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EFTU_STRP3 (Elongation factor Tu OS=Streptococcus pyogenes serotype M3 GN=tuf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 71/204 (34.80%), Postives = 102/204 (50.00%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIE 671
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD   E
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSSVNQPK---DYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDTKFE 189          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EFTU_STRP1 (Elongation factor Tu OS=Streptococcus pyogenes serotype M1 GN=tuf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 71/204 (34.80%), Postives = 102/204 (50.00%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIE 671
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD   E
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSSVNQPK---DYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDTKFE 189          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EFTU_STREM (Elongation factor Tu OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=tuf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 71/204 (34.80%), Postives = 103/204 (50.49%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIE 671
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD+  E
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSSVNQPK---DYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYE 189          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EFTU_PROA2 (Elongation factor Tu OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tuf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 75/228 (32.89%), Postives = 108/228 (47.37%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEP 740
            +EK H+NI  IGHVD GK+T T  +   L       +  F                 +DK   ERERGITI  A  ++ET K +   ID PGH D+IKNMITG +Q D A+L++  T G          QTREH LLA  + V  ++   NK+D   P+      + +  E+   L +  +  + +P +    +   +GD   E +          L+DA+D+ I EP
Sbjct:    8 REKPHVNIGTIGHVDHGKTTLTAAITTVLAKKGMAQLREFGD---------------IDKAPEERERGITISTAHVEYETDKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPEL----IELVELELRELLSEYEFPGDDIPIIKGSALKALDGDPESEAAI-------MELMDAVDSYIPEP 202          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSS (Elongation factor Tu OS=Mycobacterium sp. (strain MCS) GN=tuf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 79/224 (35.27%), Postives = 115/224 (51.34%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD 725
            + K H+NI  IGHVD GK+T T         I K + +++     E+N+ R+F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK DA      +   + +  EV   L    ++ E  P V +S     EGD          W K    L+DA+D
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVD 198          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSK (Elongation factor Tu OS=Mycobacterium sp. (strain KMS) GN=tuf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 79/224 (35.27%), Postives = 115/224 (51.34%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD 725
            + K H+NI  IGHVD GK+T T         I K + +++     E+N+ R+F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK DA      +   + +  EV   L    ++ E  P V +S     EGD          W K    L+DA+D
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVD 198          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSJ (Elongation factor Tu OS=Mycobacterium sp. (strain JLS) GN=tuf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 79/224 (35.27%), Postives = 115/224 (51.34%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD 725
            + K H+NI  IGHVD GK+T T         I K + +++     E+N+ R+F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK DA      +   + +  EV   L    ++ E  P V +S     EGD          W K    L+DA+D
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVD 198          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EFTU_MYCGE (Elongation factor Tu OS=Mycoplasma genitalium GN=tuf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 64/200 (32.00%), Postives = 101/200 (50.50%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 659
            + K H+N+  IGH+D GK+T T  +   L    K    R+++               +DK   E+ RGITI+ A  ++ + K +   +D PGH D+IKNMITG +Q D A+L++ +T        S   QTREH LLA  +GV +M+   NK D  + +  +   + + +EV   L   G++ +  P +    +   EGD
Sbjct:    8 RSKPHVNVGTIGHIDHGKTTLTAAICTVLAKEGKSAATRYDE---------------IDKAPEEKARGITINSAHVEYSSDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSATD-------SVMPQTREHILLARQVGVPKMVVFLNKCDIASDEEVQ---ELVAEEVRDLLTSYGFDGKNTPIIYGSALKALEGD 182          
The following BLAST results are available for this feature:
BLAST of CB290763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_STRPC1.165e-2134.80Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRP61.165e-2134.80Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRP31.165e-2134.80Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRP11.165e-2134.80Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STREM1.165e-2134.80Elongation factor Tu OS=Streptococcus equi subsp. ... [more]
EFTU_PROA21.165e-2132.89Elongation factor Tu OS=Prosthecochloris aestuarii... [more]
EFTU_MYCSS1.165e-2135.27Elongation factor Tu OS=Mycobacterium sp. (strain ... [more]
EFTU_MYCSK1.165e-2135.27Elongation factor Tu OS=Mycobacterium sp. (strain ... [more]
EFTU_MYCSJ1.165e-2135.27Elongation factor Tu OS=Mycobacterium sp. (strain ... [more]
EFTU_MYCGE1.165e-2132.00Elongation factor Tu OS=Mycoplasma genitalium GN=t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dd09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dd09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290763 ID=CB290763; Name=CB290763; organism=Citrus sinensis; type=EST; length=740bp
GGTCGGCGAGAGAGAAACCTTTTAGCAAATTTCATATCAAGGTTTTATAC
TAGATTTGCATAATGGGTAAGGAGAAGACTCACATCAACATTGTGGTCAT
CGGCCATGTCGACTCTGGAAAGTCGACCACCACCGGACACTTGATCTACA
AGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCT
GCTGAGATGAACAAGAGGTCATTCAAATACGCCTGGGTGCTCGACAAGCT
CAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGT
TCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCCGGACATCGT
GACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGCCGT
CCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCAAGG
ATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAG
CAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTACTC
AAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGAAGA
AGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTTC
GAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAAGGG
TCCAACCCTGCTGGACGCTCTTGACAATATCAATGAGCCG
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