CB290763

Overview
NameCB290763
Unique NameCB290763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1A_HELAM (Elongation factor 1-alpha (Fragment) OS=Helicoverpa armigera PE=3 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 4.487e-90
Identity = 165/224 (73.66%), Postives = 184/224 (82.14%), Query Frame = 3
Query:  105 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEP 740
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+K            G  L++ALD I  P
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEASTKMPWFKGWNVERKEGKAEGKCLIEALDAILPP 224          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1A_HELAL (Elongation factor 1-alpha (Fragment) OS=Heliocheilus albipunctella PE=3 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 4.487e-90
Identity = 165/224 (73.66%), Postives = 184/224 (82.14%), Query Frame = 3
Query:  105 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEP 740
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+K            G  L++ALD I  P
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEASTKMPWFKGWNVERKEGKAEGKCLIEALDAILPP 224          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1A_ANIIF (Elongation factor 1-alpha (Fragment) OS=Anicla infecta PE=3 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 4.487e-90
Identity = 165/224 (73.66%), Postives = 184/224 (82.14%), Query Frame = 3
Query:  105 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEP 740
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+K            G  L++ALD I  P
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEASTKMPWFKGWNVERKEGKAEGKCLIEALDAILPP 224          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1A_ADIBE (Elongation factor 1-alpha (Fragment) OS=Adisura bella PE=3 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 4.487e-90
Identity = 165/224 (73.66%), Postives = 184/224 (82.14%), Query Frame = 3
Query:  105 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEP 740
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+K            G  L++ALD I  P
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEASTKMPWFKGWNVERKEGKAEGKCLIEALDAILPP 224          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1A1_XENLA (Elongation factor 1-alpha OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 3.679e-84
Identity = 140/210 (66.67%), Postives = 175/210 (83.33%), Query Frame = 3
Query:   72 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG 701
            +KTH+NIV+IGHVDSGKSTTTGHLIYK GG D R +E+ E  AA++ K SFK+AW+LDKLKAERERGITIDI+LWKF+T ++  T+IDAPGHRDFIKNMITGTSQAD A+L++ + TG FEAG+S++GQTREHALLA+T+GVKQ+I C NKMD T P YS  R+DE+V+ V  YLKK+GYNP  +PFVP+SG+ G+N+   S  + W+KG
Sbjct:    7 QKTHLNIVIIGHVDSGKSTTTGHLIYKCGGFDPRALEKVEAAAAQLGKSSFKFAWILDKLKAERERGITIDISLWKFQTNRFTITIIDAPGHRDFIKNMITGTSQADVALLVVSAATGEFEAGVSRNGQTREHALLAYTMGVKQLIVCVNKMDLTDPPYSHKRFDEVVRNVMVYLKKIGYNPATIPFVPVSGWTGENISSPSQKMGWFKG 216          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.563e-79
Identity = 132/224 (58.93%), Postives = 177/224 (79.02%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEP 740
            KEK H+N++VIGHVD GKST  GHL+Y+LG +D++ ++  E+EA +  K SFKYAW+LDKLK ERERG+TID+   KFET KYY T+IDAPGHRDFIKNMITG SQAD A+L++ +  G FEAG+S +GQTREH LLA T+G+ Q+I   NKMDAT P +S+ RY +IV+ +  ++K +G+  +++PFVP+S + GDN+I+RS N+ WYKGPTL++ALDN+  P
Sbjct:    4 KEKPHMNLIVIGHVDHGKSTLVGHLLYELGFVDEKTLKMLEEEAKKRGKESFKYAWLLDKLKEERERGVTIDLTFMKFETPKYYFTIIDAPGHRDFIKNMITGASQADAAILVVSARPGEFEAGMSAEGQTREHILLAKTMGIDQIIVAVNKMDATEPPWSEKRYKQIVETLKKFMKGLGFKVDEIPFVPVSAWTGDNIIKRSENMPWYKGPTLVEALDNLKPP 227          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 6.078e-79
Identity = 131/226 (57.96%), Postives = 176/226 (77.88%), Query Frame = 3
Query:   63 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEP 740
            M ++K HIN+VVIGHVD GKST  GHL+Y+LG +D++ I+  E+EA +  K SFKYAW+LD+LK ERERG+TID+   KFET KYY T+IDAPGHRDF+KNMITG SQAD A+L++ +  G FEAG+S +GQTREH +LA T+G+ Q+I   NKMDAT P YSK RY++IV  +  ++K +GY  +++PF+P+S + G+N+IERS N+ WY GPTL++ALD   +P
Sbjct:    1 MSQQKPHINLVVIGHVDHGKSTLVGHLLYRLGFVDEKTIKMLEEEAKKKGKESFKYAWLLDRLKEERERGVTIDLTFVKFETKKYYFTIIDAPGHRDFVKNMITGASQADAAILVVSARRGEFEAGMSAEGQTREHLILAKTMGIDQLIVAVNKMDATEPPYSKQRYEQIVAFLKKFMKSLGYKVDQIPFIPVSAWTGENLIERSPNMPWYNGPTLVEALDTYIQP 226          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 6.078e-79
Identity = 143/224 (63.84%), Postives = 178/224 (79.46%), Query Frame = 3
Query:   69 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEP 740
            KEK H+N+VVIGHVDSGKSTTTGHLIYKLGGID+R + + E++A E+NK SFKYA+VLD LKAE+ERGITI+ AL +F+T     T+IDAPGH+DFIKNMITGTSQAD AVLII +  G FE G S++G T++HALLA+T+G+KQ I   NKMD  T  Y + R++EIV+ VS +L K+GY  E V ++PISGF+GDNM+E+S NL WYKGPTL +ALD    P
Sbjct:    4 KEKDHLNLVVIGHVDSGKSTTTGHLIYKLGGIDERTLAKLEEKALELNKASFKYAFVLDNLKAEQERGITINCALRQFDTPSRSYTIIDAPGHKDFIKNMITGTSQADAAVLIIAAKKGEFEDGFSREGSTKDHALLAYTMGIKQAIVAINKMD--TIDYDEERFNEIVENVSDHLGKIGYKKENVKYIPISGFDGDNMLEQSENLPWYKGPTLTEALDEFKVP 225          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.310e-78
Identity = 152/256 (59.38%), Postives = 179/256 (69.92%), Query Frame = 3
Query:   63 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK----YSKARYDEIVKEVSSYLKKVGYNPE--------------------------KVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEP 740
            MGKEKTHIN+VVIGHVD+GKSTTTGHLIYKLGGID R I +FE +A EM K SFKYAWVLDKLKAERERGITIDIALWKF T K+  TVIDAPGHRDFIKNMITGTSQAD A+L+ID     FEAGI++ G T+EHALLA+TLGVKQ+    NKMD    K    +++ RY+E+V  +   L K+G+  +                             FVPISG+ GDNM+E+STN+ WY GPTL + LD +  P
Sbjct:    1 MGKEKTHINLVVIGHVDAGKSTTTGHLIYKLGGIDARTIAKFEADAKEMGKSSFKYAWVLDKLKAERERGITIDIALWKFSTAKFEYTVIDAPGHRDFIKNMITGTSQADVALLVIDG--NNFEAGIAEGGSTKEHALLAYTLGVKQLAVGINKMDDVKDKDGGPWAQGRYNEVVDYLGPELMKIGFKKKDKGDKKKGDKKEKKDKKDKGEKKYVCSATFVPISGWTGDNMLEKSTNMPWYTGPTLFEVLDAMKPP 254          
BLAST of CB290763 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.955e-77
Identity = 127/223 (56.95%), Postives = 176/223 (78.92%), Query Frame = 3
Query:   72 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEP 740
            +K H+NIV+IGHVD GKST TGH++Y+LG  D++ ++  E+E+ +M K SFK+AW+LD++K ERERG+TI ++  KFET KY+ T+IDAPGHRDF+KNMITG SQAD A+L++ +  G FEAG+S +GQTREHA+LA T+G+ Q+I   NKMDAT P YS+ RY+EI + +  +LK +GY+  K+PF+PIS + G+N+IERS N+ WY GPTL++ALD +  P
Sbjct:    5 QKPHLNIVIIGHVDHGKSTMTGHILYRLGYFDEKTVKMIEEESKKMGKESFKFAWLLDRMKEERERGVTISLSYMKFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSAEGQTREHAILARTMGINQLIVAINKMDATEPPYSEKRYNEIKEILGKFLKGLGYDVSKIPFIPISAWTGENLIERSPNMPWYNGPTLVEALDTLEVP 227          
The following BLAST results are available for this feature:
BLAST of CB290763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_HELAM4.487e-9073.66Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELAL4.487e-9073.66Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_ANIIF4.487e-9073.66Elongation factor 1-alpha (Fragment) OS=Anicla inf... [more]
EF1A_ADIBE4.487e-9073.66Elongation factor 1-alpha (Fragment) OS=Adisura be... [more]
EF1A1_XENLA3.679e-8466.67Elongation factor 1-alpha OS=Xenopus laevis PE=1 S... [more]
EF1A_IGNH43.563e-7958.93Elongation factor 1-alpha OS=Ignicoccus hospitalis... [more]
EF1A_HYPBU6.078e-7957.96Elongation factor 1-alpha OS=Hyperthermus butylicu... [more]
EF1A2_EUPCR6.078e-7963.84Elongation factor 1-alpha 2 OS=Euplotes crassus GN... [more]
EF1AS_PORPU2.310e-7859.38Elongation factor 1-alpha S OS=Porphyra purpurea G... [more]
EF1A_DESMO1.955e-7756.95Elongation factor 1-alpha OS=Desulfurococcus mobil... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dd09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dd09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290763 ID=CB290763; Name=CB290763; organism=Citrus sinensis; type=EST; length=740bp
GGTCGGCGAGAGAGAAACCTTTTAGCAAATTTCATATCAAGGTTTTATAC
TAGATTTGCATAATGGGTAAGGAGAAGACTCACATCAACATTGTGGTCAT
CGGCCATGTCGACTCTGGAAAGTCGACCACCACCGGACACTTGATCTACA
AGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCT
GCTGAGATGAACAAGAGGTCATTCAAATACGCCTGGGTGCTCGACAAGCT
CAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGT
TCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCCGGACATCGT
GACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGCCGT
CCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCAAGG
ATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAG
CAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTACTC
AAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGAAGA
AGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTTC
GAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAAGGG
TCCAACCCTGCTGGACGCTCTTGACAATATCAATGAGCCG
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