CB290774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290774 vs. ExPASy Swiss-Prot
Match: RL36_TRIHM (60S ribosomal protein L36 OS=Trichoderma hamatum GN=rpl36 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.080e-22 Identity = 52/94 (55.32%), Postives = 68/94 (72.34%), Query Frame = 1 Query: 16 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 297 TGL VGLNKGH T + + PR + KG SKR FVR V++EVAG APYE+R+ ELL+ KDKRA K+AK++LGT RAK+K +E+ + +SR Sbjct: 9 TGLAVGLNKGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERRVIELLRNSKDKRARKLAKKRLGTFGRAKRKVDELQRVIAESR 102
BLAST of CB290774 vs. ExPASy Swiss-Prot
Match: RL36_CANAL (60S ribosomal protein L36 OS=Candida albicans GN=RPL36 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.003e-21 Identity = 47/94 (50.00%), Postives = 71/94 (75.53%), Query Frame = 1 Query: 16 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 297 +G+ G+NKG T KE+ P+ + RKG +S+R FVR++++EVAG APYE+R+ EL++ +KRA K+AK++LGTHKRA +K EEM+ + +SR Sbjct: 4 SGIAAGVNKGRKTTAKEVAPKISYRKGASSQRTVFVRSIVKEVAGLAPYERRLIELIRNAGEKRAKKLAKKRLGTHKRALRKVEEMTQVIAESR 97
BLAST of CB290774 vs. ExPASy Swiss-Prot
Match: RL36_DICDI (60S ribosomal protein L36 OS=Dictyostelium discoideum GN=rpl36 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.671e-19 Identity = 47/95 (49.47%), Postives = 69/95 (72.63%), Query Frame = 1 Query: 16 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRA 300 +G+ G NKGH V K+ + +K +KRV +R VIRE++GF+PYE+R++ELLK G DKRALKVAK++LG+ + KKKR++++N RK+ A Sbjct: 12 SGIIKGFNKGHAVAKRTVTS--TFKKQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDDIANINRKASA 104
BLAST of CB290774 vs. ExPASy Swiss-Prot
Match: RL36_DROME (60S ribosomal protein L36 OS=Drosophila melanogaster GN=RpL36 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 4.795e-19 Identity = 52/102 (50.98%), Postives = 64/102 (62.75%), Query Frame = 1 Query: 22 LFVGLNKGHIVTKKELPPRPADRKGK----------TSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 297 L +GLNKGH +K D+K K ++ F+R ++REV G APYEKR ELLKV KDKRALK KR+LGTH RAK+KREE+SN L + R Sbjct: 7 LAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLR 108
BLAST of CB290774 vs. ExPASy Swiss-Prot
Match: RL36B_YEAST (60S ribosomal protein L36-B OS=Saccharomyces cerevisiae GN=RPL36B PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 4.795e-19 Identity = 45/94 (47.87%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 16 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 297 TG+ +GLNKG VT+ P+ + +KG S R FVR+++RE+AG +PYE+R+ +L++ +KRA KVAK++LG+ RAK K EEM+N + SR Sbjct: 5 TGIAIGLNKGKKVTQMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 98
BLAST of CB290774 vs. ExPASy Swiss-Prot
Match: RL36A_YEAST (60S ribosomal protein L36-A OS=Saccharomyces cerevisiae GN=RPL36A PE=1 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 6.262e-19 Identity = 45/94 (47.87%), Postives = 66/94 (70.21%), Query Frame = 1 Query: 16 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 297 TG+ +GLNKG VT P+ + +KG S R FVR+++RE+AG +PYE+R+ +L++ +KRA KVAK++LG+ RAK K EEM+N + SR Sbjct: 5 TGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 98
BLAST of CB290774 vs. ExPASy Swiss-Prot
Match: RL36X_HUMAN (Putative 60S ribosomal protein L36-like 1 OS=Homo sapiens PE=5 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.179e-19 Identity = 47/92 (51.09%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 22 LFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 297 + VGLNKGH +TK PR + G+ +K VR +I+EV GF PYE+ ELLKV KDK+ALK K+++GTH K+KREE+SN L +R Sbjct: 7 MVVGLNKGHKLTKNLSKPRHSRSLGRPTKHTKCVRGMIQEVCGFTPYERCTMELLKVSKDKQALKFIKKRVGTHIHTKRKREELSNVLAITR 98 The following BLAST results are available for this feature:
BLAST of CB290774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290774 ID=CB290774; Name=CB290774; organism=Citrus sinensis; type=EST; length=476bpback to top |