CB290800

Overview
NameCB290800
Unique NameCB290800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: R13L3_ARATH (Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana GN=RPP13L3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.212e-19
Identity = 70/247 (28.34%), Postives = 119/247 (48.18%), Query Frame = -1
Query:  136 GSKIVVTTRNVSVARMMRSTNII-SIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVSRKECLWVEINGTKELVINFFGEKVRHIGLN 873
            GSK+++TTR  ++A  +  T     ++ L  +E W+LFER AF     VD E L+   +++ +KC GLPLA  V   LL  KRT          NEW  +  S   ++++    +     LS+ ++     +K CF Y +VFP+DY +   +LI+L +A+G++              Y + L  RS  +   +      ++ C++HD++ D A     KE  +V +   K+   +    +V H  +N
Sbjct:  299 GSKVIITTRIRAIAEGVEGTVYAHKLRFLTFEESWTLFERKAFSNIEKVD-EDLQRTGKEMVKKCGGLPLAIVVLSGLLSRKRT----------NEWHEVCASLWRRLKDNSIHISTVFDLSFKEMRHE--LKLCFLYFSVFPEDYEIKVEKLIHLLVAEGFIQEDEEMMMEDVARCYIDELVDRSLVK--AERIERGKVMSCRIHDLLRDLA-IKKAKELNFVNVYNEKQHSSDICRREVVHHLMN 529          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL40_ARATH (Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.478e-19
Identity = 61/220 (27.73%), Postives = 109/220 (49.55%), Query Frame = -1
Query:  226 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSV-DREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILD---SEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVS 873
            G KIV TTR   +   M   + + ++ L  D+ W LF +    G  ++    ++  +AR +A+KC+GLPLA  V G  +  KRT         V EW+  +D   S   +   ++  +L  L  SY++L S  + K CF YCA+FP+D+N+ K +L++ W+ +G+++                ++ +    +E ++          KMHD+V + A +++
Sbjct:  284 GCKIVFTTRLKEICGRMGVDSDMEVRCLAPDDAWDLFTKKV--GEITLGSHPEIPTVARTVAKKCRGLPLALNVIGETMAYKRT---------VQEWRSAIDVLTSSAAEFSGMEDEILPILKYSYDNLKSEQL-KLCFQYCALFPEDHNIEKNDLVDYWIGEGFIDRNKGKAENQGYEIIGILVRSCLLMEENQE--------TVKMHDVVREMALWIA 483          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL5_ARATH (Probable disease resistance protein At1g51480 OS=Arabidopsis thaliana GN=At1g51480 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 57/167 (34.13%), Postives = 86/167 (51.50%), Query Frame = -1
Query:  385 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQR---ILDSEVW-KVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLN 873
            G+KIV T R+  V++ M++   I +  L  DE W LF R           E +  +AR +A KC GLPLA  V G  +  K T         + EW     +L+S    K   +++ +L  L  SY+ L  N  +K CF YC++FP+D+ + K +LI  W+ +GY+N
Sbjct:  282 GAKIVFTKRSKEVSKYMKADMQIKVSCLSPDEAWELF-RITVDDVILSSHEDIPALARIVAAKCHGLPLALIVIGEAMACKET---------IQEWHHAINVLNSPAGHKFPGMEERILLVLKFSYDSL-KNGEIKLCFLYCSLFPEDFEIEKEKLIEYWICEGYIN 437          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: RPS5_ARATH (Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.033e-17
Identity = 65/221 (29.41%), Postives = 107/221 (48.42%), Query Frame = -1
Query:  226 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEP-IARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILD---SEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLN-AXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVS 873
            G K+  TTR+  V   M   + + +  L  +E W LF+     G +++      P +AR++ARKC+GLPLA  V G  +  KRT         V+EW   +D   S       ++  +L  L  SY++L +  ++K CF YC++FP+DY ++K  L++ W+++G++N             E    L       E E+          KMHD+V + A ++S
Sbjct:  286 GCKVAFTTRSRDVCGRMGVDDPMEVSCLQPEESWDLFQMKV--GKNTLGSHPDIPGLARKVARKCRGLPLALNVIGEAMACKRT---------VHEWCHAIDVLTSSAIDFSGMEDEILHVLKYSYDNL-NGELMKSCFLYCSLFPEDYLIDKEGLVDYWISEGFINEKEGRERNINQGYEIIGTLVRACLLLEEERNKS-----NVKMHDVVREMALWIS 489          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL33_ARATH (Probable disease resistance protein At5g43740 OS=Arabidopsis thaliana GN=At5g43740 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.762e-17
Identity = 55/166 (33.13%), Postives = 84/166 (50.60%), Query Frame = -1
Query:  385 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQR---ILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLN 873
            GSKIV TTR+  V + M++   I +  L  DE W LF R           + +  +AR +A KC GLPLA  V G  +         S K  + EW     +L+S   +   +++ +L  L  SY+ L  N  +K CF YC++FP+D  + K + I  W+ +G++N
Sbjct:  280 GSKIVFTTRSTEVCKHMKADKQIKVACLSPDEAWELF-RLTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAM---------SCKETIQEWSHAINVLNSAGHEFPGMEERILPILKFSYDSL-KNGEIKLCFLYCSLFPEDSEIPKEKWIEYWICEGFIN 434          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL4_ARATH (Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana GN=At1g50180 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17
Identity = 68/234 (29.06%), Postives = 113/234 (48.29%), Query Frame = -1
Query:  217 GSKIVVTTRNVSVARMMRSTNIISIKPLPE-DEFWSLFERFAFFGHSSVDR---EKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILD------SEVWKVEEIKQGLLAPLL-LSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYL----NAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVSRKE 873
            GS+I++TTRN  VA       ++    L   +E W L E+ +  G  +++    +K+E I +QI  +C GLPLA  V          G LL++KS  NEWQR+ +      S        K  L+A +L LSY  LP +  VK+CF Y A +P+DY ++   L++  +A+G +    +            +Y   L  RS      +     +++ C+MHD++ +     +++E
Sbjct:  295 GSEIILTTRNKEVALYADPRGVLHEPQLLTCEESWELLEKISLSGRENIEPMLVKKMEEIGKQIVVRCGGLPLAITV---------LGGLLATKSTWNEWQRVCENIKSYVSNGGSSNGSKNMLVADVLCLSYEYLPPH--VKQCFLYFAHYPEDYEVHVGTLVSYCIAEGMVMPVKHTEAGTTVEDVGQDYLEELVKRSMVMVGRRDIVTSEVMTCRMHDLMREVCLQKAKQE 517          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL1_ARATH (Probable disease resistance protein At1g12280 OS=Arabidopsis thaliana GN=At1g12280 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 56/169 (33.14%), Postives = 85/169 (50.30%), Query Frame = -1
Query:  385 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFE----RFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIK--QGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLN 873
            G K+V TTR+  V   MR  + + +  L  +E W LF+         GH  +       +AR++A KC GLPLA  V G  +  KR         +V EW+  +D       E    + +L  L  SY++L +   VK CF YC++FP+DY M K  LI+ W+ +G+++
Sbjct:  286 GCKVVFTTRSRDVCGRMRVDDPMEVSCLEPNEAWELFQMKVGENTLKGHPDIPE-----LARKVAGKCCGLPLALNVIGETMACKR---------MVQEWRNAIDVLSSYAAEFPGMEQILPILKYSYDNL-NKEQVKPCFLYCSLFPEDYRMEKERLIDYWICEGFID 439          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL37_ARATH (Probable disease resistance protein At5g47250 OS=Arabidopsis thaliana GN=At5g47250 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.746e-17
Identity = 55/164 (33.54%), Postives = 93/164 (56.71%), Query Frame = -1
Query:  385 KIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIK---QGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLN 867
            K+V TTR+  V  +MR+   I ++ L E++ W LF+        +    ++  IA++I  KC GLPLA +V       ++T   ++SKS V +W+R LD+      E+K   +G+   L LSY+ L + +   +CF YCA+FPK Y + + EL+  W+ +G+++
Sbjct:  288 KVVFTTRSKDVCSVMRANEDIEVQCLSENDAWDLFDMKVHCDGLN----EISDIAKKIVAKCCGLPLALEVI------RKT---MASKSTVIQWRRALDTLESYRSEMKGTEKGIFQVLKLSYDYLKTKNA--KCFLYCALFPKAYYIKQDELVEYWIGEGFID 436          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL2_ARATH (Probable disease resistance protein At1g12290 OS=Arabidopsis thaliana GN=At1g12290 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.142e-16
Identity = 67/226 (29.65%), Postives = 103/226 (45.58%), Query Frame = -1
Query:  226 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFER----FAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEE---IKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILAT---RSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVS 873
            G KI  TTR  SV   M   + + ++ L  D+ W LF++         H  +       IAR++A+ C GLPLA  V G  +  K+T           EW R +D           +K+ +L  L  SY++L S S VK CF YC++FP+D  + K  LI+ W+ +G+++              + IL T    S   E  K      +   KMHD+V + A +++
Sbjct:  285 GCKIAFTTRCQSVCASMGVHDPMEVRCLGADDAWDLFKKKVGDITLSSHPDIPE-----IARKVAQACCGLPLALNVIGETMACKKT---------TQEWDRAVDVSTTYAANFGAVKERILPILKYSYDNLESES-VKTCFLYCSLFPEDDLIEKERLIDYWICEGFIDGDENKKGAVGEG--YEILGTLVCASLLVEGGKFNNKSYV---KMHDVVREMALWIA 490          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL27_ARATH (Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 60/219 (27.40%), Postives = 105/219 (47.95%), Query Frame = -1
Query:  229 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILD----SEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFV 873
            GSK+++T+R + V R M++   + +  L E++ W LF + A      V  + +  IA+ ++++C GLPLA    G  +  K+   L         W  +L     S  W ++ I++ +  PL LSY+ L   +  K CF  CA+FP+DY++   E++  WMA+G++                  + T    +++            KMHD+V DFA ++
Sbjct:  275 GSKVILTSRFLEVCRSMKTDLDVRVDCLLEEDAWELFCKNA---GDVVRSDHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVKL---------WNHVLSKLSKSVPW-IKSIEEKIFQPLKLSYDFLEDKA--KFCFLLCALFPEDYSIEVTEVVRYWMAEGFMEELGSQEDSMNEG-----ITTVESLKDYCLLEDGDRRDTVKMHDVVRDFAIWI 473          
The following BLAST results are available for this feature:
BLAST of CB290800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
R13L3_ARATH3.212e-1928.34Putative disease resistance RPP13-like protein 3 O... [more]
DRL40_ARATH5.478e-1927.73Probable disease resistance protein At5g63020 OS=A... [more]
DRL5_ARATH6.057e-1834.13Probable disease resistance protein At1g51480 OS=A... [more]
RPS5_ARATH1.033e-1729.41Disease resistance protein RPS5 OS=Arabidopsis tha... [more]
DRL33_ARATH1.762e-1733.13Probable disease resistance protein At5g43740 OS=A... [more]
DRL4_ARATH3.006e-1729.06Putative disease resistance protein At1g50180 OS=A... [more]
DRL1_ARATH6.697e-1733.14Probable disease resistance protein At1g12280 OS=A... [more]
DRL37_ARATH8.746e-1733.54Probable disease resistance protein At5g47250 OS=A... [more]
DRL2_ARATH1.142e-1629.65Probable disease resistance protein At1g12290 OS=A... [more]
DRL27_ARATH1.492e-1627.40Disease resistance protein At4g27190 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290800 ID=CB290800; Name=CB290800; organism=Citrus sinensis; type=EST; length=876bp
TTTTTTTTTTTTTTTTGATGAAATAGCCATGGATTGAAATAAAGATGGAT
TGTAATGACTTGTATCATAAATTAAGAGGCTACGCAATCGATCAAATTCA
AAAAAGGACATAGGAAATGAAGCTCCTCTTTGAAAATTTAACCCTATGTG
ACGGACTTTCTCACCAAAAAAGTTTATGACTAATTCCTTGGTACCATTTA
TTTCTACCCACAAACATTCTTTTCTACTTACAAATTGGGCAAAATCATGT
ACTATGTCATGCATCTTACACCTCAGAATATCATCATCGTCATCATCTTT
TTCAAACTCTTGAAAGAAAGAGCGTGTTGCTAAGATGTTGAAATACTCTT
CTCCAATCATCTCCATTTCTTCGTCTTCATCTGCATTAAGGTAACCTTGA
GCCATCCATAGATTAATCAATTCCCTTTTATTCATATTGTAGTCTTTTGG
AAAGACAGCACAATATGAGAAGCACCGTTTTACCATAGAATTGGAGGGCA
AATCGTTATAACTCAACAACAAAGGAGCCAAAAGACCTTGCTTAATCTCT
TCTACTTTCCACACTTCACTATCTAAAATTCTTTGCCACTCATTTACTAT
ACTTTTAGAGGACAAGAGATTCCCTGTACGTTTATCGCACAAGAGGTTCC
CTGTTACCTTTGCAGCAAGAGGCAGGCCTTTGCACTTGCGTGCAATTTGT
CGTGCGATTGGTTCTAATTTTTCACGATCAACAGAAGAATGACCGAAAAA
TGCGAACCGCTCGAACAACGACCAGAATTCATCTTCAGGCAATGGCTTAA
TGGAGATAATATTTGTTGATCTCATCATACGGGCAACTGACACATTACGT
GTGGTAACCACAATTTTACTTCCGGG
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