CB290800

Overview
NameCB290800
Unique NameCB290800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL31_ARATH (Putative disease resistance protein At5g05400 OS=Arabidopsis thaliana GN=At5g05400 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16
Identity = 69/233 (29.61%), Postives = 99/233 (42.49%), Query Frame = -1
Query:  196 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVS-------RKECLWVEIN 873
            GSKI  T+R+  V   M     I +  L  D+ W LF R      +     K+  +A+ IARKC GLPLA  V G  +  K++         + EW       V     I+  +L+ L  SY+DL      K CF + A+FP+DY + K +LI  W+ QG +                  L      +E E         + KMHD+V + A ++S       +K  L VE N
Sbjct:  284 GSKIAFTSRSNEVCGKMGVDKEIEVTCLMWDDAWDLFTRN--MKETLESHPKIPEVAKSIARKCNGLPLALNVIGETMARKKS---------IEEWH----DAVGVFSGIEADILSILKFSYDDLKCEK-TKSCFLFSALFPEDYEIGKDDLIEYWVGQGII--LGSKGINYKGYTIIGTLTRAYLLKESETKE------KVKMHDVVREMALWISSGCGDQKQKNVLVVEAN 492          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL7_ARATH (Probable disease resistance protein At1g58390 OS=Arabidopsis thaliana GN=At1g58390 PE=2 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 7.404e-16
Identity = 67/232 (28.88%), Postives = 113/232 (48.71%), Query Frame = -1
Query:  217 GSKIVVTTRNVSVARMMRSTNIISIKP--LPEDEFWSLFERFAF----FGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRI---LDSE-VWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNA---XXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVSRKE 873
            G K+++T++N SVA +      ++ KP  L  ++ W+LF+R AF       S VD E++E + +Q+ + C GLPLA KV G LL  K T         +++W+R+   + S+ V +       +   L +S+ +LP  S +K CF Y A FP+D+ +N  +L   W A+G   A               Y   L  R+    +E+         C +HD++ +   F +++E
Sbjct:  293 GWKVLLTSQNESVA-VRGDIKYLNFKPECLAIEDSWTLFQRIAFPKKDASESKVD-EEMEDMGKQMLKHCGGLPLAIKVLGGLLAAKYT---------MHDWERLSVNIGSDIVGRTSSNNSSIYHVLSMSFEELP--SYLKHCFLYLAHFPEDHKINVEKLSYCWAAEGISTAEDYHNGETIQDVGQSYLEELVRRNMI-IWERDATASRFGTCHLHDMMREVCLFKAKEE 510          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: RPP13_ARATH (Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16
Identity = 59/215 (27.44%), Postives = 107/215 (49.77%), Query Frame = -1
Query:  238 GSKIVVTTRNVSVARMMRSTNII-SIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIKQGLLAPLL--LSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFA 873
            GS++++TTR  +VA  +        ++ L  +E W LFE+ AF      D + L+   +++ +KC+GLPL   V   LL          S+   +EW  + +S +W+  +     +AP++  LS+ +L   S  K CF Y ++FP+DY ++  +LI+L +A+G++              Y   L  RS  +   +      ++ C++HD++ D A
Sbjct:  298 GSRVIITTRIKAVAEGVDGRFYAHKLRFLTFEESWELFEQRAFRNIQRKDEDLLKT-GKEMVQKCRGLPLCIVVLAGLL----------SRKTPSEWNDVCNS-LWRRLKDDSIHVAPIVFDLSFKELRHES--KLCFLYLSIFPEDYEIDLEKLIHLLVAEGFIQGDEEMMMEDVARYYIEELIDRSLLEAVRR--ERGKVMSCRIHDLLRDVA 496          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL23_ARATH (Putative disease resistance protein At4g10780 OS=Arabidopsis thaliana GN=At4g10780 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16
Identity = 62/217 (28.57%), Postives = 103/217 (47.47%), Query Frame = -1
Query:  238 KIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSV-DREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILD---SEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILAT---RSFFQEFEKXXXXXDILRCKMHDIVHDFA 867
            K+V TTR++ V   M   + + ++ L  ++ W LF+     G  S+     +  +A+++A KC+GLPLA  V G  +  KR          V EW   +D   S   +   +   +L  L  SY++L ++  V+ CF YCA++P+DY++ K  LI+ W+ +G+++              + IL T        E  K       L  KMHD+V + A
Sbjct:  285 KVVFTTRSLDVCARMGVHDPMEVQCLSTNDAWELFQEKV--GQISLGSHPDILELAKKVAGKCRGLPLALNVIGETMAGKRA---------VQEWHHAVDVLTSYAAEFSGMDDHILLILKYSYDNL-NDKHVRSCFQYCALYPEDYSIKKYRLIDYWICEGFIDGNIGKERAVNQG--YEILGTLVRACLLSEEGKNK-----LEVKMHDVVREMA 482          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL16_ARATH (Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana GN=At1g61190 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16
Identity = 50/163 (30.67%), Postives = 86/163 (52.76%), Query Frame = -1
Query:  388 KIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREK-LEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIK--QGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYL 867
            K+  TTR+  V   M     + +K L  ++ W LF+     G +++  +  +  +AR++A+KC+GLPLA      L C    G  ++SK++V EW+  +D       E    Q  + P+L    D   +  +K CF YCA+FP+D  ++ + LIN W+ +G++
Sbjct:  285 KVAFTTRDQKVCGQMGDHKPMQVKCLEPEDAWELFKNKV--GDNTLRSDPVIVGLAREVAQKCRGLPLA------LSC---IGETMASKTMVQEWEHAIDVLTRSAAEFSDMQNKILPILKYSYDSLEDEHIKSCFLYCALFPEDDKIDTKTLINKWICEGFI 436          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL15_ARATH (Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana GN=At1g61180 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.649e-15
Identity = 58/217 (26.73%), Postives = 103/217 (47.47%), Query Frame = -1
Query:  226 KIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQR---ILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVS 867
            K+  TTR+  V   M     + +  L  ++ W LF+        S D   +E +AR++A+KC+GLPLA  V G  +         SSK++V EW+    + ++   +  +++  +L  L  SY+ L  +  +K CF YCA+FP+D  +   +LI+ W+ +G++               + +L T +      K         C MHD+V + A +++
Sbjct:  284 KVAFTTRSREVCGEMGDHKPMQVNCLEPEDAWELFKNKVGDNTLSSDPVIVE-LAREVAQKCRGLPLALNVIGETM---------SSKTMVQEWEHAIHVFNTSAAEFSDMQNKILPILKYSYDSL-GDEHIKSCFLYCALFPEDGEIYNEKLIDYWICEGFIGEDQVIKRARNKG--YAMLGTLTRANLLTKVGTYY----CVMHDVVREMALWIA 483          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL38_ARATH (Probable disease resistance protein At5g47260 OS=Arabidopsis thaliana GN=At5g47260 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.154e-15
Identity = 51/167 (30.54%), Postives = 89/167 (53.29%), Query Frame = -1
Query:  388 GSKIVVTTRNVSVARMMRSTNI-ISIKPLPEDEFWSLFERFAFFGHSSV-DREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQ---RILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYL 873
            G KIV TT+++      +  +  + I  L  +E W LF+     G +++   + +  +AR +A  C+GLPLA  + G  +  KRT         V EW+    +L S   +  +++ G L P+L S  D  S+ +++ CF YCA+FP++ ++ K +L+N W+ +G L
Sbjct:  273 GCKIVFTTQSLEACDESKWVDAKVEITCLSPEEAWDLFQETV--GENTLRSHQDIPKLARVVASTCRGLPLALNLIGEAMSGKRT---------VREWRYTIHVLASSTAEFPDMEDGTL-PILKSIYDNMSDEIIRLCFLYCALFPENLDIGKEDLVNYWICEGIL 427          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: RP8L3_ARATH (Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana GN=RPP8L3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.799e-15
Identity = 63/218 (28.90%), Postives = 101/218 (46.33%), Query Frame = -1
Query:  244 GSKIVVTTRNVSVARMMRSTNI-ISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKV-------EEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHD 873
            G K+++T+RN  V      T +    + L   E W LFER      +  + E++E I +++   C GLPLA KV G LL +K T          +EW+R+ ++   ++       +     +   L LSY DLP++  +K CF Y A FP+DY +  R L + W A+G  +            +Y   L  R+     EK      +  C+MHD++ +
Sbjct:  291 GWKMLLTSRNEGVGLHADPTCLSFRARILNPKESWKLFERIVP-RRNETEYEEMEAIGKEMVTYCGGLPLAVKVLGGLLANKHT---------ASEWKRVSENIGAQIVGKSCLDDNSLNSVYRILSLSYEDLPTD--LKHCFLYLAHFPEDYKIKTRTLYSYWAAEGIYDG---LTILDSGEDYLEELVRRNLVIA-EKSNLSWRLKLCQMHDMMRE 492          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: RP8L2_ARATH (Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana GN=RPP8L2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.799e-15
Identity = 61/228 (26.75%), Postives = 101/228 (44.30%), Query Frame = -1
Query:  217 GSKIVVTTRNVSVARMMRSTNIISIKP--LPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKV-------EEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVSRKE 873
            G K+++T+RN  +  +       + +P  L  ++ W LFER         + +  E + +++   C GLPLA KV G LL  K T         V EW+R+  + V  +       ++    +   L LSY DLP    +K CF Y A FP+DY ++ + L N W+A+G +             E +     R      E+      I  C+MHD++ +     +++E
Sbjct:  291 GWKMLLTSRNEGLG-LHADPTCFAFRPRILTPEQSWKLFERIVSSRRDKTEFKVDEAMGKEMVTYCGGLPLAVKVLGGLLAKKHT---------VLEWKRVHSNIVTHIVGKSGLSDDNSNSVYRVLSLSYEDLP--MQLKHCFFYLAHFPEDYKIDVKILFNYWVAEGIITPFHDGSTIQDTGESYLEELVRRNMVVVEESYLTSRIEYCQMHDMMREVCLSKAKEE 506          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL17_ARATH (Probable disease resistance protein At1g61300 OS=Arabidopsis thaliana GN=At1g61300 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.799e-15
Identity = 56/216 (25.93%), Postives = 97/216 (44.91%), Query Frame = -1
Query:  226 KIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIKQ--GLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVS 867
            K+  TTR+  V   M     + +K L  ++ W LF+          D   +E +AR++A+KC+GLPLA  V G  +         +SK++V EW+  +D       E       + P+L    D   +  +K CF YCA+FP+D  +   +LI+ W+ +G++               + +L T +      K      +    MHD+V + A +++
Sbjct:  173 KVAFTTRDQKVCGEMGDHKPMQVKCLEPEDAWELFKNKVGDNTLRSDPVIVE-LAREVAQKCRGLPLALSVIGETM---------ASKTMVQEWEHAIDVLTRSAAEFSNMGNKILPILKYSYDSLGDEHIKSCFLYCALFPEDDEIYNEKLIDYWICEGFIGEDQVIKRARNKG--YEMLGTLTLANLLTKVGTEHVV----MHDVVREMALWIA 372          
The following BLAST results are available for this feature:
BLAST of CB290800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
DRL31_ARATH4.341e-1629.61Putative disease resistance protein At5g05400 OS=A... [more]
DRL7_ARATH7.404e-1628.88Probable disease resistance protein At1g58390 OS=A... [more]
RPP13_ARATH9.670e-1627.44Disease resistance protein RPP13 OS=Arabidopsis th... [more]
DRL23_ARATH9.670e-1628.57Putative disease resistance protein At4g10780 OS=A... [more]
DRL16_ARATH9.670e-1630.67Probable disease resistance protein At1g61190 OS=A... [more]
DRL15_ARATH1.649e-1526.73Probable disease resistance protein At1g61180 OS=A... [more]
DRL38_ARATH2.154e-1530.54Probable disease resistance protein At5g47260 OS=A... [more]
RP8L3_ARATH4.799e-1528.90Disease resistance RPP8-like protein 3 OS=Arabidop... [more]
RP8L2_ARATH4.799e-1526.75Probable disease resistance RPP8-like protein 2 OS... [more]
DRL17_ARATH4.799e-1525.93Probable disease resistance protein At1g61300 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290800 ID=CB290800; Name=CB290800; organism=Citrus sinensis; type=EST; length=876bp
TTTTTTTTTTTTTTTTGATGAAATAGCCATGGATTGAAATAAAGATGGAT
TGTAATGACTTGTATCATAAATTAAGAGGCTACGCAATCGATCAAATTCA
AAAAAGGACATAGGAAATGAAGCTCCTCTTTGAAAATTTAACCCTATGTG
ACGGACTTTCTCACCAAAAAAGTTTATGACTAATTCCTTGGTACCATTTA
TTTCTACCCACAAACATTCTTTTCTACTTACAAATTGGGCAAAATCATGT
ACTATGTCATGCATCTTACACCTCAGAATATCATCATCGTCATCATCTTT
TTCAAACTCTTGAAAGAAAGAGCGTGTTGCTAAGATGTTGAAATACTCTT
CTCCAATCATCTCCATTTCTTCGTCTTCATCTGCATTAAGGTAACCTTGA
GCCATCCATAGATTAATCAATTCCCTTTTATTCATATTGTAGTCTTTTGG
AAAGACAGCACAATATGAGAAGCACCGTTTTACCATAGAATTGGAGGGCA
AATCGTTATAACTCAACAACAAAGGAGCCAAAAGACCTTGCTTAATCTCT
TCTACTTTCCACACTTCACTATCTAAAATTCTTTGCCACTCATTTACTAT
ACTTTTAGAGGACAAGAGATTCCCTGTACGTTTATCGCACAAGAGGTTCC
CTGTTACCTTTGCAGCAAGAGGCAGGCCTTTGCACTTGCGTGCAATTTGT
CGTGCGATTGGTTCTAATTTTTCACGATCAACAGAAGAATGACCGAAAAA
TGCGAACCGCTCGAACAACGACCAGAATTCATCTTCAGGCAATGGCTTAA
TGGAGATAATATTTGTTGATCTCATCATACGGGCAACTGACACATTACGT
GTGGTAACCACAATTTTACTTCCGGG
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