CB290800

Overview
NameCB290800
Unique NameCB290800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL28_ARATH (Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15
Identity = 75/280 (26.79%), Postives = 118/280 (42.14%), Query Frame = -1
Query:   55 SKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEI--KQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNA-XXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFA-QFVSRK----ECLWVEINGTKELVINFFGEKVRHIGLNFQRGASFPMSFFEFDRLRSLLIYDTSH 870
            SK+V+T+R + V + M +   I +  L E E W LF           + + ++PIA+ ++ +C GLPLA    G  L           K  V  W+  L+        I  ++ +   L LSY+ L  N  +K CF +CA+FP+DY++   ELI  W+A+G L+                  L      ++ +           KMHD+V DFA  F+S +      L +   G  E   + F   V+ + L   +    P +  E      LL+   SH
Sbjct:  246 SKVVLTSRRLEVCQQMMTNENIKVACLQEKEAWELFCHNV---GEVANSDNVKPIAKDVSHECCGLPLAIITIGRTL---------RGKPQVEVWKHTLNLLKRSAPSIDTEEKIFGTLKLSYDFLQDN--MKSCFLFCALFPEDYSIKVSELIMYWVAEGLLDGQHHYEDMMNEGVTLVERLKDSCLLEDGDSCD------TVKMHDVVRDFAIWFMSSQGEGFHSLVMAGRGLIEFPQDKFVSSVQRVSLMANKLERLPNNVIEGVETLVLLLQGNSH 505          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL11_ARATH (Probable disease resistance protein RDL6/RF9 OS=Arabidopsis thaliana GN=RDL6 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.069e-14
Identity = 57/174 (32.76%), Postives = 91/174 (52.30%), Query Frame = -1
Query:  394 GSKIVVTTRNVSVARMMRSTNIISIKP--LPEDEFWSLFERFAF----FGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKV--------EEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQG 873
            G K+++T+RN SVA M R+T+ I+ KP  L  ++ W+LF+R A          +D EK E + + + + C GLPLA +V G +L +K T +         +W+R+ ++    +        ++        L LS+ +LPS   +K CF Y A FP DY +N + L   W A+G
Sbjct:  293 GWKVLLTSRNESVA-MRRNTSYINFKPECLTTEDSWTLFQRIALPMKDAAEFKIDEEK-EELGKLMIKHCGGLPLAIRVLGGMLAEKYTSH---------DWRRLSENIGSHLVGGRTNFNDDNNNTCNYVLSLSFEELPS--YLKHCFLYLAHFPDDYEINVKNLSYYWAAEG 453          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL10_ARATH (Probable disease resistance protein RDL5/RF45 OS=Arabidopsis thaliana GN=RDL5 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.306e-14
Identity = 56/174 (32.18%), Postives = 90/174 (51.72%), Query Frame = -1
Query:  394 GSKIVVTTRNVSVARMMRSTNIISIKP--LPEDEFWSLFERFAF----FGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKV--------EEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQG 873
            G K+++T+RN SVA M R+T+ I+ KP  L  ++ W+LF+R A          +D EK E + + + + C GLPLA +V G +L +K T +         +W+R+ ++    +        ++        L LS+ +LPS   +K CF Y A FP+DY +    L   W A+G
Sbjct:  293 GWKVLLTSRNESVA-MRRNTSYINFKPECLTTEDSWTLFQRIALPMKDAAEFKIDEEK-EELGKLMIKHCGGLPLAIRVLGGMLAEKYTSH---------DWRRLSENIGSHLVGGRTNFNDDNNNTCNNVLSLSFEELPS--YLKHCFLYLAHFPEDYEIKVENLSYYWAAEG 453          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL18_ARATH (Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana GN=At1g61310 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.633e-13
Identity = 56/221 (25.34%), Postives = 94/221 (42.53%), Query Frame = -1
Query:  226 KIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIK--QGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFF-----QEFEKXXXXXDILRCKMHDIVHDFAQFVS 867
            K+  TTR+  V   M     + +  L  ++ W LF+        S D   +  +AR++A+KC+GLPLA  V G  +         +SK++V EW+  +D       E    +  + P+L    D   +  +K CF YCA+FP+D  +    LI+  + +G++                    TR+        E         I  C MHD+V + A +++
Sbjct:  286 KVAFTTRSREVCGEMGDHKPMQVNCLEPEDAWELFKNKVGDNTLSSD-PVIVGLAREVAQKCRGLPLALNVIGETM---------ASKTMVQEWEYAIDVLTRSAAEFSGMENKILPILKYSYDSLGDEHIKSCFLYCALFPEDGQIYTETLIDKLICEGFIGEDQVIKRARNKGYAMLGTLTRANLLTKVGTELANLLTKVSIYHCVMHDVVREMALWIA 496          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL12_ARATH (Probable disease resistance protein At1g59620 OS=Arabidopsis thaliana GN=At1g59620 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.439e-13
Identity = 54/172 (31.40%), Postives = 88/172 (51.16%), Query Frame = -1
Query:  394 GSKIVVTTRNVSVARMMRSTNIISIKP--LPEDEFWSLFERFAFFGHSSVDR---EKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKV-------EEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQG 873
            G K+++T+RN  VA +  + N    KP  L  +E W++F R  F G ++ +    EK+E + +Q+ + C GLPLA KV G LL    T         ++EW+RI  +    +       ++    +   L LS+ +LP    +K CF Y A FP+D+ ++  +L   W A+G
Sbjct:  267 GWKVLLTSRNEGVA-LRANPNGFIFKPDCLTPEESWTIFRRIVFPGENTTEYKVDEKMEELGKQMIKHCGGLPLALKVLGGLLVVHFT---------LDEWKRIYGNIKSHIVGGTSFNDKNMSSVYHILHLSFEELP--IYLKHCFLYLAQFPEDFTIDLEKLSYYWAAEG 426          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: R13L2_ARATH (Putative disease resistance RPP13-like protein 2 OS=Arabidopsis thaliana GN=RPP13L2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.867e-13
Identity = 65/245 (26.53%), Postives = 111/245 (45.31%), Query Frame = -1
Query:  145 GSKIVVTTRNVSVARMMRSTNIIS--IKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVSRKECLWVEINGTKELVINFFGEKVRHI 873
            GS++++TT ++ V    R   + +  I+ L   E W+LFE+ AF     VD+E L+ I +++ +KC GLP    V   L+  K+           NEW  +  S   K + I    L  L  S+ D+     +K CF Y +VFP+DY ++  +LI L +A+G++              Y   L   S  +  ++      ++  ++HD+V +F      KE  +V +   +        E V H+
Sbjct:  294 GSRVIITT-SIRVVAEGRDKRVYTHNIRFLTFKESWNLFEKKAFRYILKVDQE-LQKIGKEMVQKCGGLPRTTVVLAGLMSRKKP----------NEWNDVWSSLRVKDDNIHVSSLFDL--SFKDMGHE--LKLCFLYLSVFPEDYEVDVEKLIQLLVAEGFIQEDEEMTMEDVARYYIEDLVYISLVEVVKR--KKGKLMSFRIHDLVREFT-IKKSKELNFVNVYDEQHSSTTSRREVVHHL 519          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: RP8HA_ARATH (Disease resistance protein RPH8A OS=Arabidopsis thaliana GN=RPH8A PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.229e-12
Identity = 60/231 (25.97%), Postives = 101/231 (43.72%), Query Frame = -1
Query:  217 GSKIVVTTRNVSVARMMRSTNI-ISIKPLPEDEFWSLFERFAFFGHSSVD---REKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKV-------EEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSF-FQEFEKXXXXXDILRCKMHDIVHDFAQFVSRKE 873
            G K+++T+RN  V      T +      L  +E W L ER  F      +    E++E + +++   C GLPLA K  G LL +K T         V EW+R+ D+   ++       +     +   L LSY DLP++  +K CF + A +P+D  +  ++L N W A+G  +             Y   L  R+    +         I  C+MHD++ +     +++E
Sbjct:  293 GWKMLLTSRNEGVGIHADPTCLTFRASILNPEESWKLCERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLLANKHT---------VPEWKRVSDNIGSQIVGGSCLDDNSLNSVYRILSLSYEDLPTH--LKHCFLHLAHYPEDSKIYTQDLFNYWAAEGIYDG---STIQDSGEYYLEELVRRNLVIADNRYLISEFKIKNCQMHDMMREVCLSKAKEE 509          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL19_ARATH (Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana GN=At1g63350 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.229e-12
Identity = 48/161 (29.81%), Postives = 81/161 (50.31%), Query Frame = -1
Query:  397 KIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDRE-KLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQR---ILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQ 867
            K+V TTR++ V   M     + ++ L +++ + LF++    G  ++  + ++  ++R +A+KC GLPLA  V    +  KRT         V EW+    +L+S   K   +   +L  L  SY+ L     VK C  YCA+FP+D  + K  LI  W+ +
Sbjct:  284 KVVFTTRSLDVCTSMGVEKPMEVQCLADNDAYDLFQKKV--GQITLGSDPEIRELSRVVAKKCCGLPLALNVVSETMSCKRT---------VQEWRHAIYVLNSYAAKFSGMDDKILPLLKYSYDSLKGED-VKMCLLYCALFPEDAKIRKENLIEYWICE 432          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: RFL1_ARATH (Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.803e-12
Identity = 46/165 (27.88%), Postives = 77/165 (46.67%), Query Frame = -1
Query:  388 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSV-DREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILD--SEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYL 873
            G K+  TT +  V   M   N + I  L     W L ++    G +++     +  +AR+++ KC GLPLA  V G  +  KRT         + EW+   +  +       ++  +L  L  SY+ L      K CF YC++FP+D+ + K  LI  W+ +G++
Sbjct:  286 GCKVAFTTHSKEVCGRMGVDNPMEISCLDTGNAWDLLKKKV--GENTLGSHPDIPQLARKVSEKCCGLPLALNVIGETMSFKRT---------IQEWRHATEVLTSATDFSGMEDEILPILKYSYDSLNGED-AKSCFLYCSLFPEDFEIRKEMLIEYWICEGFI 438          
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL8_ARATH (Putative disease resistance protein At1g58400 OS=Arabidopsis thaliana GN=At1g58400 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.966e-12
Identity = 55/175 (31.43%), Postives = 88/175 (50.29%), Query Frame = -1
Query:  388 GSKIVVTTRNVSVARMMRSTNIISIKP--LPEDEFWSLFERFAF----FGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKV-------EEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYL 873
            G K+++T+R  ++A M  +   ++ KP  L   E W LF+R A          VD+E +E + +Q+ + C GLPLA KV G LL  K T          ++W+R+ ++    +       +     +   L LS+ +LPS   +K CF Y A FP+D+N+   +L   W A+G L
Sbjct:  294 GWKVLITSRTETIA-MHGNRRYVNFKPECLTILESWILFQRIAMPRVDESEFKVDKE-MEMMGKQMIKYCGGLPLAVKVLGGLLAAKYT---------FHDWKRLSENIGCHIVGRTDFSDGNNSSVYHVLSLSFEELPS--YLKHCFLYLAHFPEDHNIKVEKLSYCWAAEGIL 455          
The following BLAST results are available for this feature:
BLAST of CB290800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
DRL28_ARATH6.268e-1526.79Probable disease resistance protein At4g27220 OS=A... [more]
DRL11_ARATH1.069e-1432.76Probable disease resistance protein RDL6/RF9 OS=Ar... [more]
DRL10_ARATH5.306e-1432.18Probable disease resistance protein RDL5/RF45 OS=A... [more]
DRL18_ARATH2.633e-1325.34Probable disease resistance protein At1g61310 OS=A... [more]
DRL12_ARATH3.439e-1331.40Probable disease resistance protein At1g59620 OS=A... [more]
R13L2_ARATH5.867e-1326.53Putative disease resistance RPP13-like protein 2 O... [more]
RP8HA_ARATH2.229e-1225.97Disease resistance protein RPH8A OS=Arabidopsis th... [more]
DRL19_ARATH2.229e-1229.81Putative disease resistance protein At1g63350 OS=A... [more]
RFL1_ARATH3.803e-1227.88Disease resistance protein RFL1 OS=Arabidopsis tha... [more]
DRL8_ARATH4.966e-1231.43Putative disease resistance protein At1g58400 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290800 ID=CB290800; Name=CB290800; organism=Citrus sinensis; type=EST; length=876bp
TTTTTTTTTTTTTTTTGATGAAATAGCCATGGATTGAAATAAAGATGGAT
TGTAATGACTTGTATCATAAATTAAGAGGCTACGCAATCGATCAAATTCA
AAAAAGGACATAGGAAATGAAGCTCCTCTTTGAAAATTTAACCCTATGTG
ACGGACTTTCTCACCAAAAAAGTTTATGACTAATTCCTTGGTACCATTTA
TTTCTACCCACAAACATTCTTTTCTACTTACAAATTGGGCAAAATCATGT
ACTATGTCATGCATCTTACACCTCAGAATATCATCATCGTCATCATCTTT
TTCAAACTCTTGAAAGAAAGAGCGTGTTGCTAAGATGTTGAAATACTCTT
CTCCAATCATCTCCATTTCTTCGTCTTCATCTGCATTAAGGTAACCTTGA
GCCATCCATAGATTAATCAATTCCCTTTTATTCATATTGTAGTCTTTTGG
AAAGACAGCACAATATGAGAAGCACCGTTTTACCATAGAATTGGAGGGCA
AATCGTTATAACTCAACAACAAAGGAGCCAAAAGACCTTGCTTAATCTCT
TCTACTTTCCACACTTCACTATCTAAAATTCTTTGCCACTCATTTACTAT
ACTTTTAGAGGACAAGAGATTCCCTGTACGTTTATCGCACAAGAGGTTCC
CTGTTACCTTTGCAGCAAGAGGCAGGCCTTTGCACTTGCGTGCAATTTGT
CGTGCGATTGGTTCTAATTTTTCACGATCAACAGAAGAATGACCGAAAAA
TGCGAACCGCTCGAACAACGACCAGAATTCATCTTCAGGCAATGGCTTAA
TGGAGATAATATTTGTTGATCTCATCATACGGGCAACTGACACATTACGT
GTGGTAACCACAATTTTACTTCCGGG
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