CB290822

Overview
NameCB290822
Unique NameCB290822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP52F_CANTR (Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP52A6 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.271e-15
Identity = 55/179 (30.73%), Postives = 87/179 (48.60%), Query Frame = -1
Query:  323 LLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD------YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN---------LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAP 814
            LL++ M  L++H +   + R+E+   FG  +        +  L   + ++ IL E LR+YP +   SR   ++T L           + +P G  +   +   H+  E +G DA +F+PER+ E  +K  K   +Y PF  GPRIC+GQ FAL EA      ++Q +    SP  V  P
Sbjct:  329 LLSFAMFELARHPEIWSKLREEIEVNFGVGEESRVEEITFESLKRCEYLKAILNETLRMYPSVPVNSRTATRDTTLPRGGGPNGTDPIFIPKGSTVAYIVYKTHRLEEYYGKDADDFRPERWFEPSTK--KLGWAYVPFNGGPRICLGQQFALTEASYVITRLVQMFETVSSPPDVEYP 505          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP52V_CANAP (Cytochrome P450 52E1 OS=Candida apicola GN=CYP52E1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.272e-15
Identity = 55/188 (29.26%), Postives = 88/188 (46.81%), Query Frame = -1
Query:  287 LLNWTMVLLSKHQDWQERARQEVLQVFGNNK---PDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN---------LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGT 814
            LL++    L  + +     R+ VL  FG+     P + +L   K++Q ++ EVLRL+P +    R  + +TKL           + +P G  +      + +  ++WG DA  F+P+R+ E   +A  +   Y PF  GPRIC+GQ FAL EA      I Q +S             +  LHP++ T
Sbjct:  320 LLSFITYYLGAYPEVYAELREAVLSEFGSTDVETPTFEQLKQCKVLQNVIREVLRLHPNVPLNFRQAIVDTKLPTGGGPNGDQPVFVPKGQNVFYSTYSMQRRTDIWGPDATTFRPDRWNEP-REALASGWDYIPFNGGPRICLGQQFALTEASYTIVRICQEFS------------RIEVLHPDVIT 494          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4E2_DROME (Cytochrome P450 4e2 OS=Drosophila melanogaster GN=Cyp4e2 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.272e-15
Identity = 47/162 (29.01%), Postives = 90/162 (55.56%), Query Frame = -1
Query:  338 LNWTMVLLSKHQDWQERARQEVLQVFGNNK----PDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPS 811
            +++ + LLS+HQD Q +  +E  +V GN++      + E++ +K + + + E  R+YP +  + R   K+  +    +P G  + L ++++  + +++ D   +F+PERF             Y PF++GPR C+GQ FAL+E K   + I++N  FE+ P+
Sbjct:  316 VSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQEISQMKYLDLFIKEAQRVYPSVPFIGRFTEKDYVIDGDLVPKGTTLNLGLVMLGYNEKVFKDPH-KFRPERF----ELEKPGPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRN--FEVLPA 470          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP6A1_MUSDO (Cytochrome P450 6A1 OS=Musca domestica GN=CYP6A1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.579e-15
Identity = 49/161 (30.43%), Postives = 91/161 (56.52%), Query Frame = -1
Query:  353 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPD---YGELNHLKIVQMILYEVLRLYPPL--TALSRAVLKETKLGN---LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSF 811
            + + +  L+++Q  Q+R R+EV +VF   K D   Y  L ++  +  +L E LR YP    +AL+R  L +  + +     LP G  + +P++ +H DPEL+ +   EF PERF+  + K  ++ V +  F  GPR C+G  F  +++++  A++++++ F
Sbjct:  314 MGFALYELAQNQQLQDRLREEVNEVFDQFKEDNISYDALMNIPYLDQVLNETLRKYPVGVGSALTRQTLNDYVVPHNPKYVLPKGTLVFIPVLGIHYDPELYPNPE-EFDPERFSPEMVKQ-RDSVDWLGFGDGPRNCIGMRFGKMQSRLGLALVIRHFRF 472          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4V2_HUMAN (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.579e-15
Identity = 46/156 (29.49%), Postives = 92/156 (58.97%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFG-NNKPDYGE-LNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            +NW++ LL  + + Q++   E+  VFG +++P   E L  L+ ++ ++ E LRL+P +   +R+V ++ ++    +  G +  +    +H+DP  + +   EF+PERF    ++  ++  +Y PF++GPR C+GQ FA++E K   + IL+++  E
Sbjct:  338 INWSLYLLGSNPEVQKKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPE-EFQPERFFPENAQG-RHPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHFWIE 491          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4E3_DROME (Cytochrome P450 4e3 OS=Drosophila melanogaster GN=Cyp4e3 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.579e-15
Identity = 50/161 (31.06%), Postives = 89/161 (55.28%), Query Frame = -1
Query:  338 LNWTMVLLSKHQDWQERARQEVLQVFG---NNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPS 811
            +++++ LLS+H D Q +  +E  +V G   N    + E+  +K + + + E  R+YP +  + R   K+  +    +P G  + L +IL+  +  ++ D    F+PERF E   K A  +  Y PF++GPR C+GQ FAL+E K   + +++  SFE+ P+
Sbjct:  316 VSFSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVSFQEIAKMKYLDLFIKEAQRVYPSVPFIGRYCDKDYDINGSIVPKGTTLNLALILLGYNDRIFKDPH-HFRPERFEE--EKPAPFE--YLPFSAGPRNCIGQKFALLELKTVISKVVR--SFEVLPA 469          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.579e-15
Identity = 48/159 (30.19%), Postives = 80/159 (50.31%), Query Frame = -1
Query:  347 LNWTMVLLSKHQDWQERARQEVLQVFGNNK----PDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFEL 811
            L W M  + K+   +E+A+ E+ Q+F   +     D  EL++LK V   + E LRL+PP   + R  +  T +    +P   ++ +    + +DP+ W D A  F PERF +       N   Y PF +G R+C G  F L    +  A++L ++++EL
Sbjct:  315 LEWAMSEMMKNPKVKEKAQAELRQIFKGKEIIRETDLEELSYLKSV---IKETLRLHPPSQLIPRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSD-ADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWEL 469          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: THAS_RAT (Thromboxane-A synthase OS=Rattus norvegicus GN=Tbxas1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.287e-15
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = -1
Query:  341 LNWTMVLLSKHQDWQERARQEV-LQVFGNNKPDYGELNH-LKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSP 811
            L++   LL+ H + QER  +EV L +  +  P+Y  L   L  + M++ E LR+YPP    +R   ++ ++    +PAG  + + +  +H DPE W +    F PERF    ++  +   +Y PF +GPR C+G    L+  K+    +L  + FE  P
Sbjct:  350 LSFITYLLATHPECQERLLKEVDLFMEKHPAPEYCNLQEGLPYLDMVVAETLRMYPPAFRFTREAAQDCEVLGQHIPAGSVLEIAVGALHHDPEHWPNPET-FDPERFT-AEARLQQKPFTYLPFGAGPRSCLGVRLGLLVVKLTLLQVLHKFRFEACP 506          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP52W_CANAP (Cytochrome P450 52E2 OS=Candida apicola GN=CYP52E2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.287e-15
Identity = 52/188 (27.66%), Postives = 90/188 (47.87%), Query Frame = -1
Query:  287 LLNWTMVLLSKHQDWQERARQEVLQVFGN---NKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN---------LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGT 814
            LL++T   L  + +  +  R+ V+  FG+     P + +L   K++Q ++ EVLRL+P +    R  + +T             + +P G ++     ++ ++  +WG D+  F+P+R+ E   +A  +   Y PF  GPRIC+GQ FAL EA      I Q +S             +  LHP++ T
Sbjct:  320 LLSFTTYYLGAYPEVYDELREAVIADFGSADAEPPTFEQLKQCKVLQNVIREVLRLHPNVPLNFREAIADTTFPTGGGPNGDQPIFVPKGQKVFYATYVMQRNAGIWGPDSTSFRPDRWNEP-REALASGWDYIPFNGGPRICLGQQFALTEASYTLVRICQEFS------------RIEVLHPDVIT 494          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.287e-15
Identity = 48/155 (30.97%), Postives = 81/155 (52.26%), Query Frame = -1
Query:  347 WTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTAL-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFEL 805
            W MV + K+     +A+ EV + F N    D  ++  LK +++++ E +RL+ P+  L  R   KET++   T+P   ++ + +  + +DP+ W DD   FKPERF +       N   Y PF  G RIC G +F L    +  A +L ++ ++L
Sbjct:  314 WAMVEMLKNPRVLAKAQAEVREAFRNKVTFDENDVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYW-DDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKL 467          
The following BLAST results are available for this feature:
BLAST of CB290822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
CP52F_CANTR3.271e-1530.73Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP5... [more]
CP52V_CANAP4.272e-1529.26Cytochrome P450 52E1 OS=Candida apicola GN=CYP52E1... [more]
CP4E2_DROME4.272e-1529.01Cytochrome P450 4e2 OS=Drosophila melanogaster GN=... [more]
CP6A1_MUSDO5.579e-1530.43Cytochrome P450 6A1 OS=Musca domestica GN=CYP6A1 P... [more]
CP4V2_HUMAN5.579e-1529.49Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1... [more]
CP4E3_DROME5.579e-1531.06Cytochrome P450 4e3 OS=Drosophila melanogaster GN=... [more]
C71D8_SOYBN5.579e-1530.19Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
THAS_RAT7.287e-1530.82Thromboxane-A synthase OS=Rattus norvegicus GN=Tbx... [more]
CP52W_CANAP7.287e-1527.66Cytochrome P450 52E2 OS=Candida apicola GN=CYP52E2... [more]
C71D6_SOLCH7.287e-1530.97Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dg05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dg05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290822 ID=CB290822; Name=CB290822; organism=Citrus sinensis; type=EST; length=814bp
TTTTTTTTTTTTTTTTTACCACAGCATTAATGCCCTTATTCTAATCATGG
CATTATAAAATTTTCCAATGGGGGCAAACATCTTTACTCTAAATAAAACT
AGAGTTGGGTTGAGCTCAATTTAAATATCTAAACAGCTCTTGTCTAAGCT
TTGAATCTCAATACAAATTTAAATACATTAAACTTCATTATAAAAGAGTC
TACATTGGCATCATGCTAATCTTATTGACAATATATAGTTGCCGGTATTA
ATTATTTTTGCACCATAGCTTCCGTAAAATCAATTGGGTACCCAGTTCCG
GATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGATGGAGACAAC
TCGAATGAGTAGTTTTGAAGAATCATTGCCGGGGCCATTTTTGCTTCTAC
TAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCGATGCGAATGGGA
AATATGAAACTTGATTTTTTGCCGCCTTTGAAATTCCTTCCGCAAACCTT
TCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAGGATCCTGGTG
AACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTAATGTCAAGT
TTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCGCAGTTAAGGGC
GGATAAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAATTTTGAGGTG
GTTCAATTCACCATAGTCGGGCTTATTATTGCCAAACACTTGCAAAACCT
CTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAATAAGACCATT
GTCCAATTAAGCAA
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