CB290822

Overview
NameCB290822
Unique NameCB290822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: C13A3_CAEEL (Putative cytochrome P450 CYP13A3 OS=Caenorhabditis elegans GN=cyp-13A3 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.210e-21
Identity = 53/155 (34.19%), Postives = 91/155 (58.71%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTAL-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            L+++  LL++H + Q++ ++EV +   + +  + +L+ LK ++ ++ E LRLYP  + + +R  +K T +  + +  G  +      +H DP+ WG++A EFKPER+  G  +A     +Y PF  GPRIC+G   A +E KM  A IL+ YS E
Sbjct:  335 LSYSSYLLARHPEIQKKLQEEVDRECPDPEVTFDQLSKLKYMECVIKETLRLYPLASIVHNRKCMKSTTVLGMKIEEGTNVQADTWTLHYDPKFWGENANEFKPERWESGDEQAVAKG-AYLPFGLGPRICIGMRLAYMEEKMLLAQILKKYSLE 488          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CPXB_BACME (Bifunctional P-450/NADPH-P450 reductase OS=Bacillus megaterium GN=CYP102A1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 6.804e-21
Identity = 61/174 (35.06%), Postives = 96/174 (55.17%), Query Frame = -1
Query:  296 LLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPE 814
            LL++ +  L K+    ++A +E  +V  +  P Y ++  LK V M+L E LRL+P   A S    ++T L G   L  G ++ + +  +H+D  +WGDD  EF+PERF    + +A  Q ++ PF +G R C+GQ FAL EA +   M+L+++ FE   +Y        TL PE
Sbjct:  273 LLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE---NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP341_MOUSE (Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.804e-21
Identity = 52/155 (33.55%), Postives = 89/155 (57.42%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            L++T+  L+ H D Q++ ++E+ +   N  P  Y  +  ++ + M+L E LRLYP    L R   K+ +L  + +P G  + +P   +H DP+ W  +  EF+PERF++  +K + +   Y PF  GPR C+G  FA +  K+A   ++QN+SF+
Sbjct:  315 LSFTLYCLATHPDIQKKLQEEIDETLPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERFCKKDVELNGVYIPKGSTVMIPSYALHHDPQHW-PEPEEFQPERFSKE-NKGSIDPYLYMPFGIGPRNCIGMRFAFMTMKLALTKVMQNFSFQ 467          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP134_DROME (Probable cytochrome P450 313a4 OS=Drosophila melanogaster GN=Cyp313a4 PE=2 SV=4)

HSP 1 Score: 101.293 bits (251), Expect = 6.804e-21
Identity = 53/158 (33.54%), Postives = 91/158 (57.59%), Query Frame = -1
Query:  344 WTMVLLSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELS 805
            +T++LL+   ++QERA +E+  +F N       Y +   +  + +IL E +R+ PP+  +SR   ++ KL N + +P GVQI + +  +H+  ++WG DA  F P+ F    +   K+  +Y PF  G R C+G  +AL+ AK+  A +L+NY F+ S
Sbjct:  310 YTLMLLAMFPEYQERAFEEIKTIFPNTGDFDVSYADTQQMVYLDLILNESMRVIPPVPVVSRQTSQDLKLSNGIVVPKGVQIAIDIYHMHRSKKIWGPDAETFNPDHFLPH-NIQDKHPYAYIPFTKGIRNCIGWRYALISAKVTLAKLLRNYRFKTS 466          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.887e-21
Identity = 52/155 (33.55%), Postives = 88/155 (56.77%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            L++ + LL+ H D Q++ + E+     N  P  Y  L  ++ + M++ E LRLYP    L R    + ++  L +P G  + +P   +H+DP+ W  +  EF+PERF++  ++ + N   Y PF SGPR C+G  FAL+  K+A   +LQN++ +
Sbjct:  314 LSFALYLLAIHPDVQKKLQDEIDAALPNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYW-PEPEEFRPERFSKK-NQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQ 466          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3A4_HUMAN (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 100.908 bits (250), Expect = 8.887e-21
Identity = 55/159 (34.59%), Postives = 91/159 (57.23%), Query Frame = -1
Query:  350 LLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVS---YFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 814
            +L++ M  L+ H D Q++ ++E+  V  N  P  Y  +  ++ + M++ E LRL+P    L R   K+ ++  + +P GV + +P   +H+DP+ W  +  +F PERF    SK  K+ +    Y PF SGPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  313 VLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYW-TEPEKFLPERF----SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 466          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3A6_RABIT (Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.980e-20
Identity = 54/156 (34.62%), Postives = 90/156 (57.69%), Query Frame = -1
Query:  347 LNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFEL 811
            L++ M LL+ H D Q++ ++E+  +  N +   Y  L  ++ + M++ E LRLYP    L R   K+  +    +P G  + +P   +H+DP+ W +   EF+PERF++  +K   N   Y PF +GPR C+G  FAL+  K+A   ++QN+SF+L
Sbjct:  312 LSFIMHLLATHPDVQQKLQEEIDTLLPNKELATYDTLVKMEYLDMVVNETLRLYPIAGRLERVCKKDVDINGTFIPKGTIVMMPTYALHRDPQHWTEPD-EFRPERFSKK-NKDNINPYIYHPFGAGPRNCLGMRFALMNIKLALVRLMQNFSFKL 465          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: C13A4_CAEEL (Putative cytochrome P450 CYP13A4 OS=Caenorhabditis elegans GN=cyp-13A4 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.980e-20
Identity = 50/157 (31.85%), Postives = 94/157 (59.87%), Query Frame = -1
Query:  344 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTAL-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELS 811
            L+++  LL+ H + Q++ ++EV +   + +  + +++ LK ++ ++ E LR+YP  + + +R  +K+T +  + +  G  + +    +H DP++WGDDA EFKPER+  G  +    +  Y PF  GPRIC+G   A++E K+    IL+ Y+F+ S
Sbjct:  335 LSYSSYLLATHPEIQKKLQEEVDRECPDPEVTFDQISKLKYMECVVKEALRMYPLASLVHNRKCMKKTNVLGVEIDEGTNVQVDTWTLHYDPKVWGDDASEFKPERWETG-DELFYAKGGYLPFGMGPRICIGMRLAMMEEKLLLTHILKKYTFDTS 490          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 49/155 (31.61%), Postives = 93/155 (60.00%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFGNN-KPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            L++ + LL+ H D Q++ ++E+     N  +P Y ++  ++ + M+L E LRLYP  + L R   ++ ++  + +P G  + +P+  +H DP+ W  +  +F+PERF++  +K + +   + PF +GPR C+G  FAL+  K+A   +LQN+S +
Sbjct:  312 LSFALYLLATHPDVQKKLQEEIDIALPNKARPSYDKVMEMEYLDMVLNETLRLYPIGSRLERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYW-PEPEKFRPERFSKE-NKGSIDPYIFLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSLQ 464          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3AH_CAVPO (Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 58/181 (32.04%), Postives = 98/181 (54.14%), Query Frame = -1
Query:  272 LNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILR 811
            L + M  L+ H D Q++ +QE+ +   N   P Y  +  ++ + M++ E LRLYP    + R   K+ ++  ++ P G  + +P   +H+D + W  +  EF+PERF++  +K   +   Y PF +GPR C+G   AL+  K+A   +LQN+SF     Y    T +P     LG+Q+IL+
Sbjct:  314 LCFIMYSLATHPDVQKKLQQEIDKTLPNKAFPTYDVMMEMEYLDMVVNETLRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYW-PEPDEFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSF-----YTCKETQIPL---RLGSQVILQ 484          
The following BLAST results are available for this feature:
BLAST of CB290822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
C13A3_CAEEL5.210e-2134.19Putative cytochrome P450 CYP13A3 OS=Caenorhabditis... [more]
CPXB_BACME6.804e-2135.06Bifunctional P-450/NADPH-P450 reductase OS=Bacillu... [more]
CP341_MOUSE6.804e-2133.55Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a P... [more]
CP134_DROME6.804e-2133.54Probable cytochrome P450 313a4 OS=Drosophila melan... [more]
CP3AD_MOUSE8.887e-2133.55Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE... [more]
CP3A4_HUMAN8.887e-2134.59Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1... [more]
CP3A6_RABIT1.980e-2034.62Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CY... [more]
C13A4_CAEEL1.980e-2031.85Putative cytochrome P450 CYP13A4 OS=Caenorhabditis... [more]
CP3AV_MESAU3.377e-2031.61Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP3AH_CAVPO3.377e-2032.04Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dg05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dg05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290822 ID=CB290822; Name=CB290822; organism=Citrus sinensis; type=EST; length=814bp
TTTTTTTTTTTTTTTTTACCACAGCATTAATGCCCTTATTCTAATCATGG
CATTATAAAATTTTCCAATGGGGGCAAACATCTTTACTCTAAATAAAACT
AGAGTTGGGTTGAGCTCAATTTAAATATCTAAACAGCTCTTGTCTAAGCT
TTGAATCTCAATACAAATTTAAATACATTAAACTTCATTATAAAAGAGTC
TACATTGGCATCATGCTAATCTTATTGACAATATATAGTTGCCGGTATTA
ATTATTTTTGCACCATAGCTTCCGTAAAATCAATTGGGTACCCAGTTCCG
GATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGATGGAGACAAC
TCGAATGAGTAGTTTTGAAGAATCATTGCCGGGGCCATTTTTGCTTCTAC
TAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCGATGCGAATGGGA
AATATGAAACTTGATTTTTTGCCGCCTTTGAAATTCCTTCCGCAAACCTT
TCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAGGATCCTGGTG
AACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTAATGTCAAGT
TTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCGCAGTTAAGGGC
GGATAAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAATTTTGAGGTG
GTTCAATTCACCATAGTCGGGCTTATTATTGCCAAACACTTGCAAAACCT
CTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAATAAGACCATT
GTCCAATTAAGCAA
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